| trd_0002 protein network | https://string-db.org/network/309801.trd_0002 | DNA polymerase III tau and gamma subunits; Identified by match to protein family HMM TIGR00678. |
| trd_0003 protein network | https://string-db.org/network/309801.trd_0003 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0004 protein network | https://string-db.org/network/309801.trd_0004 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0005 protein network | https://string-db.org/network/309801.trd_0005 | Tetratricopeptide repeat family; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...] |
| trd_0006 protein network | https://string-db.org/network/309801.trd_0006 | Threonine ammonia-lyase, biosynthetic; Identified by match to protein family HMM PF00291. |
| trd_0007 protein network | https://string-db.org/network/309801.trd_0007 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0009 protein network | https://string-db.org/network/309801.trd_0009 | Hypothetical protein; Identified by glimmer; putative. |
| pyrF protein network | https://string-db.org/network/309801.trd_0010 | Orotidine 5'-phosphate decarboxylase; Identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; Belongs to the OMP decarboxylase family. Type 2 subfamily. |
| trd_0011 protein network | https://string-db.org/network/309801.trd_0011 | Identified by match to protein family HMM PF01965; match to protein family HMM TIGR01382. |
| trd_0012 protein network | https://string-db.org/network/309801.trd_0012 | Putative membrane protein. |
| trd_0013 protein network | https://string-db.org/network/309801.trd_0013 | Probable transport ATP-binding protein; Identified by match to protein family HMM PF00005. |
| trmH protein network | https://string-db.org/network/309801.trd_0014 | tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransf [...] |
| trd_0015 protein network | https://string-db.org/network/309801.trd_0015 | Hypothetical protein; Identified by glimmer; putative. |
| cas6 protein network | https://string-db.org/network/309801.trd_0016 | CRISPR-associated protein Cas6; Identified by match to protein family HMM PF01881; match to protein family HMM TIGR01877. |
| trd_0017 protein network | https://string-db.org/network/309801.trd_0017 | Hypothetical protein; Identified by glimmer; putative. |
| cst2 protein network | https://string-db.org/network/309801.trd_0018 | CRISPR-associated regulatory protein, DevR family; Identified by match to protein family HMM TIGR01875; match to protein family HMM TIGR02585. |
| cas5t protein network | https://string-db.org/network/309801.trd_0019 | CRISPR-associated protein Cas5, Tneap subtype; Identified by match to protein family HMM TIGR01895; match to protein family HMM TIGR02593. |
| cas3 protein network | https://string-db.org/network/309801.trd_0020 | CRISPR-associated helicase Cas3 domain protein; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR01587. |
| cas4 protein network | https://string-db.org/network/309801.trd_0021 | CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, t [...] |
| cas1 protein network | https://string-db.org/network/309801.trd_0022 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...] |
| trd_0023 protein network | https://string-db.org/network/309801.trd_0023 | Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF02769. |
| cas2 protein network | https://string-db.org/network/309801.trd_0024 | CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, [...] |
| pdxT protein network | https://string-db.org/network/309801.trd_0025 | Glutamine amidotransferase subunit pdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is ch [...] |
| pdxS protein network | https://string-db.org/network/309801.trd_0026 | Pyridoxine biosynthesis protein; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT [...] |
| trd_0027 protein network | https://string-db.org/network/309801.trd_0027 | Aminotransferase, class I and II; Identified by match to protein family HMM PF00155. |
| trd_0028 protein network | https://string-db.org/network/309801.trd_0028 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0029 protein network | https://string-db.org/network/309801.trd_0029 | Hypothetical protein; Identified by glimmer; putative. |
| glmU protein network | https://string-db.org/network/309801.trd_0031 | UDP-N-acetylglucosamine synthesis bifunctional protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal d [...] |
| prs protein network | https://string-db.org/network/309801.trd_0032 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...] |
| trd_0033 protein network | https://string-db.org/network/309801.trd_0033 | Magnesium and cobalt efflux protein corC; Identified by match to protein family HMM PF00571; match to protein family HMM PF03471. |
| trd_0034 protein network | https://string-db.org/network/309801.trd_0034 | N5,N10-methylenetetrahydromethanopterin reductase-related protein; Identified by match to protein family HMM PF00296. |
| trd_0035 protein network | https://string-db.org/network/309801.trd_0035 | BirA protein; Identified by match to protein family HMM PF03099. |
| trd_0036 protein network | https://string-db.org/network/309801.trd_0036 | Putative cellulose-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model m [...] |
| trd_0037 protein network | https://string-db.org/network/309801.trd_0037 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0038 protein network | https://string-db.org/network/309801.trd_0038 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0039 protein network | https://string-db.org/network/309801.trd_0039 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. |
| trd_0040 protein network | https://string-db.org/network/309801.trd_0040 | Conserved hypothetical protein; Identified by match to protein family HMM PF00132. |
| trd_0041 protein network | https://string-db.org/network/309801.trd_0041 | 3-hydroxybutyryl-CoA dehydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. |
| trd_0042 protein network | https://string-db.org/network/309801.trd_0042 | Electron transfer flavoprotein beta-subunit; Identified by match to protein family HMM PF01012. |
| trd_0043 protein network | https://string-db.org/network/309801.trd_0043 | Electron transfer flavoprotein alpha subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. |
| trd_0044 protein network | https://string-db.org/network/309801.trd_0044 | Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486; match to protein family HMM PF0 [...] |
| trd_0045 protein network | https://string-db.org/network/309801.trd_0045 | Identified by match to protein family HMM PF02674. |
| trd_0046 protein network | https://string-db.org/network/309801.trd_0046 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0047 protein network | https://string-db.org/network/309801.trd_0047 | Putative acetyltransferase; Identified by match to protein family HMM PF00583. |
| trd_0048 protein network | https://string-db.org/network/309801.trd_0048 | PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match t [...] |
| trd_0049 protein network | https://string-db.org/network/309801.trd_0049 | Putative RNA nucleotidyltransferase; Identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; Belongs to the tRNA nucleotidyl [...] |
| trd_0050 protein network | https://string-db.org/network/309801.trd_0050 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0051 protein network | https://string-db.org/network/309801.trd_0051 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0052 protein network | https://string-db.org/network/309801.trd_0052 | Tyrosine recombinase xerC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...] |
| trd_0053 protein network | https://string-db.org/network/309801.trd_0053 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0054 protein network | https://string-db.org/network/309801.trd_0054 | Hypothetical protein; Identified by glimmer; putative. |
| mraZ protein network | https://string-db.org/network/309801.trd_0055 | mraZ protein; Identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; Belongs to the MraZ family. |
| mraW protein network | https://string-db.org/network/309801.trd_0056 | S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. |
| trd_0057 protein network | https://string-db.org/network/309801.trd_0057 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0058 protein network | https://string-db.org/network/309801.trd_0058 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717. |
| murF protein network | https://string-db.org/network/309801.trd_0059 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murei [...] |
| mraY protein network | https://string-db.org/network/309801.trd_0060 | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY s [...] |
| murD protein network | https://string-db.org/network/309801.trd_0061 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF [...] |
| ftsW protein network | https://string-db.org/network/309801.trd_0062 | Cell division protein FtsW; Identified by match to protein family HMM PF01098; match to protein family HMM TIGR02614; Belongs to the SEDS family. |
| murC protein network | https://string-db.org/network/309801.trd_0063 | UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family. |
| murB protein network | https://string-db.org/network/309801.trd_0064 | UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. |
| ddl protein network | https://string-db.org/network/309801.trd_0065 | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. |
| trd_0066 protein network | https://string-db.org/network/309801.trd_0066 | Cell division protein ftsQ homolog; Essential cell division protein. |
| trd_0067 protein network | https://string-db.org/network/309801.trd_0067 | Hypothetical protein; Identified by glimmer; putative. |
| ftsZ protein network | https://string-db.org/network/309801.trd_0068 | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...] |
| nrdR protein network | https://string-db.org/network/309801.trd_0069 | Transcriptional regulator, NrdR family; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. |
| trd_0070 protein network | https://string-db.org/network/309801.trd_0070 | Hypothetical protein; Identified by glimmer; putative. |
| trx protein network | https://string-db.org/network/309801.trd_0071 | Thioredoxin; Identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family. |
| trd_0072 protein network | https://string-db.org/network/309801.trd_0072 | Putative fructokinase; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. |
| trd_0073 protein network | https://string-db.org/network/309801.trd_0073 | Aminopeptidase; Identified by match to protein family HMM PF02225; match to protein family HMM PF04389. |
| trd_0075 protein network | https://string-db.org/network/309801.trd_0075 | Putative arsenic-efflux pump regulatory protein; Identified by match to protein family HMM PF01022. |
| trd_0076 protein network | https://string-db.org/network/309801.trd_0076 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0077 protein network | https://string-db.org/network/309801.trd_0077 | Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. |
| trd_0078 protein network | https://string-db.org/network/309801.trd_0078 | Putative membrane protein. |
| trd_0079 protein network | https://string-db.org/network/309801.trd_0079 | Putative universal stress protein; Identified by match to protein family HMM PF00582. |
| trd_0080 protein network | https://string-db.org/network/309801.trd_0080 | Putative integral membrane protein. |
| trd_0081 protein network | https://string-db.org/network/309801.trd_0081 | Putative integral membrane export protein; Identified by match to protein family HMM PF03741. |
| trd_0082 protein network | https://string-db.org/network/309801.trd_0082 | alpha-D-1,4-glucosidase; Identified by match to protein family HMM PF00128. |
| trd_0083 protein network | https://string-db.org/network/309801.trd_0083 | Hypothetical protein; Identified by glimmer; putative. |
| recG protein network | https://string-db.org/network/309801.trd_0084 | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwindin [...] |
| trd_0085 protein network | https://string-db.org/network/309801.trd_0085 | Putative flavin reductase-like protein; Identified by match to protein family HMM PF01613. |
| trd_0086 protein network | https://string-db.org/network/309801.trd_0086 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0087 protein network | https://string-db.org/network/309801.trd_0087 | Putative glycosyl transferase; Identified by match to protein family HMM PF00534. |
| trd_0088 protein network | https://string-db.org/network/309801.trd_0088 | Glycosyltransferase WbpY; Identified by match to protein family HMM PF00534. |
| rpmB protein network | https://string-db.org/network/309801.trd_0089 | Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family. |
| prmC protein network | https://string-db.org/network/309801.trd_0090 | Methyltransferase, HemK family; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to th [...] |
| prfA protein network | https://string-db.org/network/309801.trd_0091 | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. |
| trd_0092 protein network | https://string-db.org/network/309801.trd_0092 | Identified by match to protein family HMM TIGR00725. |
| trd_0093 protein network | https://string-db.org/network/309801.trd_0093 | 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. |
| trd_0094 protein network | https://string-db.org/network/309801.trd_0094 | Hypothetical protein; Identified by glimmer; putative. |
| pheA protein network | https://string-db.org/network/309801.trd_0095 | P-protein; Identified by match to protein family HMM PF00800; match to protein family HMM PF01842. |
| trd_0096 protein network | https://string-db.org/network/309801.trd_0096 | N6-adenine-specific methylase; Identified by match to protein family HMM PF03602; match to protein family HMM PF05175. |
| coaD protein network | https://string-db.org/network/309801.trd_0097 | Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...] |
| trd_0098 protein network | https://string-db.org/network/309801.trd_0098 | Conserved hypothetical protein. |
| trd_0099 protein network | https://string-db.org/network/309801.trd_0099 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0100 protein network | https://string-db.org/network/309801.trd_0100 | Putative methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. |
| trd_0101 protein network | https://string-db.org/network/309801.trd_0101 | Methyl-accepting chemotaxis protein McpL; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...] |
| trpE protein network | https://string-db.org/network/309801.trd_0102 | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first [...] |
| trd_0103 protein network | https://string-db.org/network/309801.trd_0103 | Para-aminobenzoate synthase glutamine amidotransferase component II; Identified by match to protein family HMM PF00117; match to protein family HMM TIGR00566. |
| trpD protein network | https://string-db.org/network/309801.trd_0104 | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranila [...] |
| trpC protein network | https://string-db.org/network/309801.trd_0105 | Indole-3-glycerol phosphate synthase; Identified by match to protein family HMM PF00218; Belongs to the TrpC family. |
| trpF protein network | https://string-db.org/network/309801.trd_0106 | N-(5'phosphoribosyl)anthranilate isomerase; Identified by match to protein family HMM PF00697; Belongs to the TrpF family. |
| trpB protein network | https://string-db.org/network/309801.trd_0107 | Tryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. |
| trpA protein network | https://string-db.org/network/309801.trd_0108 | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. |
| aroH protein network | https://string-db.org/network/309801.trd_0109 | Chorismate mutase; Identified by match to protein family HMM PF07736; match to protein family HMM TIGR01796. |
| aroF protein network | https://string-db.org/network/309801.trd_0110 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361. |
| rimM protein network | https://string-db.org/network/309801.trd_0111 | 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...] |
| hisI protein network | https://string-db.org/network/309801.trd_0112 | Histidine biosynthesis bifunctional protein hisIE; Identified by match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; match to protein [...] |
| trd_0113 protein network | https://string-db.org/network/309801.trd_0113 | Conserved hypothetical protein; Belongs to the UPF0109 family. |
| rpsP protein network | https://string-db.org/network/309801.trd_0114 | Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family. |
| trd_0116 protein network | https://string-db.org/network/309801.trd_0116 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. |
| trd_0117 protein network | https://string-db.org/network/309801.trd_0117 | Putative pimeloyl-CoA synthetase; Identified by match to protein family HMM PF02629. |
| trd_0118 protein network | https://string-db.org/network/309801.trd_0118 | Identified by match to protein family HMM PF03061. |
| trd_0119 protein network | https://string-db.org/network/309801.trd_0119 | Putative transport system periplasmic protein; Identified by match to protein family HMM PF01547. |
| trd_0120 protein network | https://string-db.org/network/309801.trd_0120 | Putative sarcosine oxidase subunit beta; Identified by match to protein family HMM PF01266. |
| trd_0121 protein network | https://string-db.org/network/309801.trd_0121 | Rieske 2Fe-2S domain protein; Identified by match to protein family HMM PF00355. |
| trd_0122 protein network | https://string-db.org/network/309801.trd_0122 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0123 protein network | https://string-db.org/network/309801.trd_0123 | Putative oxidoreductase protein; Identified by match to protein family HMM PF01266. |
| trd_0124 protein network | https://string-db.org/network/309801.trd_0124 | Carbon monoxide dehydrogenase subunit G (CoxG) superfamily; Identified by match to protein family HMM PF06240. |
| trd_0125 protein network | https://string-db.org/network/309801.trd_0125 | Helix-turn-helix, Fis-type; Identified by match to protein family HMM PF07905. |
| trd_0127 protein network | https://string-db.org/network/309801.trd_0127 | Transposase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged wi [...] |
| trd_0128 protein network | https://string-db.org/network/309801.trd_0128 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0129 protein network | https://string-db.org/network/309801.trd_0129 | GntR-family transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729. |
| trd_0130 protein network | https://string-db.org/network/309801.trd_0130 | NADP oxidoreductase coenzyme F420-dependent family. |
| trd_0131 protein network | https://string-db.org/network/309801.trd_0131 | ygbK domain protein; Identified by match to protein family HMM PF07005. |
| trd_0132 protein network | https://string-db.org/network/309801.trd_0132 | Ribulose bisphosphate carboxylase; Identified by match to protein family HMM PF00016; Belongs to the RuBisCO large chain family. |
| trd_0133 protein network | https://string-db.org/network/309801.trd_0133 | Probable nadh-dependent dyhydrogenase; Identified by match to protein family HMM PF01408. |
| trd_0134 protein network | https://string-db.org/network/309801.trd_0134 | Conserved hypothetical protein. |
| trd_0135 protein network | https://string-db.org/network/309801.trd_0135 | Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. |
| trd_0136 protein network | https://string-db.org/network/309801.trd_0136 | Possible multiple sugar transport system permease protein; Identified by match to protein family HMM PF00528. |
| trd_0137 protein network | https://string-db.org/network/309801.trd_0137 | Sugar abc transporter, permease protein; Identified by match to protein family HMM PF00528. |
| trd_0138 protein network | https://string-db.org/network/309801.trd_0138 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0139 protein network | https://string-db.org/network/309801.trd_0139 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0140 protein network | https://string-db.org/network/309801.trd_0140 | Putative purple acid phosphatase-like protein; Identified by match to protein family HMM PF00149. |
| trd_0141 protein network | https://string-db.org/network/309801.trd_0141 | Putative cable pili-associated 22 kDa adhesin protein; Identified by match to protein family HMM PF00041; match to protein family HMM PF00149. |
| trd_0142 protein network | https://string-db.org/network/309801.trd_0142 | Identified by match to protein family HMM PF03099. |
| trd_0143 protein network | https://string-db.org/network/309801.trd_0143 | Glycine cleavage system H protein; Similar to mitochondrial precursor; identified by match to protein family HMM PF01597. |
| gcvH-2 protein network | https://string-db.org/network/309801.trd_0144 | GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. |
| trd_0145 protein network | https://string-db.org/network/309801.trd_0145 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0146 protein network | https://string-db.org/network/309801.trd_0146 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0147 protein network | https://string-db.org/network/309801.trd_0147 | Heterodisulfide reductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754. |
| trd_0148 protein network | https://string-db.org/network/309801.trd_0148 | Electron transfer flavoprotein alpha-subunit; Identified by match to protein family HMM PF00766; match to protein family HMM PF01012. |
| trd_0149 protein network | https://string-db.org/network/309801.trd_0149 | Electron transfer flavoprotein subunit beta; Identified by match to protein family HMM PF01012. |
| trd_0150 protein network | https://string-db.org/network/309801.trd_0150 | Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754. |
| trd_0151 protein network | https://string-db.org/network/309801.trd_0151 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0152 protein network | https://string-db.org/network/309801.trd_0152 | Conserved hypothetical protein. |
| trd_0153 protein network | https://string-db.org/network/309801.trd_0153 | CoB--CoM heterodisulfide reductase iron-sulfur subunit A 1; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. |
| trd_0154 protein network | https://string-db.org/network/309801.trd_0154 | Identified by match to protein family HMM PF02754. |
| trd_0155 protein network | https://string-db.org/network/309801.trd_0155 | Metabolism heterodisulfide reductase C. |
| trd_0156 protein network | https://string-db.org/network/309801.trd_0156 | thioredoxin:Glutaredoxin:Thioredoxins/glutaredox i n. |
| trd_0157 protein network | https://string-db.org/network/309801.trd_0157 | Identified by match to protein family HMM PF01597. |
| trd_0158 protein network | https://string-db.org/network/309801.trd_0158 | Identified by match to protein family HMM PF02635. |
| trd_0159 protein network | https://string-db.org/network/309801.trd_0159 | Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_0160 protein network | https://string-db.org/network/309801.trd_0160 | Identified by match to protein family HMM PF01206; Belongs to the sulfur carrier protein TusA family. |
| trd_0161 protein network | https://string-db.org/network/309801.trd_0161 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0162 protein network | https://string-db.org/network/309801.trd_0162 | Translin family; Identified by match to protein family HMM PF01997. |
| trd_0163 protein network | https://string-db.org/network/309801.trd_0163 | Identified by match to protein family HMM PF00210; match to protein family HMM PF02915. |
| gcvPB protein network | https://string-db.org/network/309801.trd_0164 | Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...] |
| trd_0165 protein network | https://string-db.org/network/309801.trd_0165 | Hypothetical Membrane Spanning Protein; Identified by match to protein family HMM PF07136. |
| argH protein network | https://string-db.org/network/309801.trd_0166 | Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838. |
| argA protein network | https://string-db.org/network/309801.trd_0167 | Putative acetyltransferase; Identified by match to protein family HMM PF00583. |
| lipA protein network | https://string-db.org/network/309801.trd_0168 | Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...] |
| trd_0169 protein network | https://string-db.org/network/309801.trd_0169 | Putative DNA helicase; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF08148. |
| lipB protein network | https://string-db.org/network/309801.trd_0170 | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...] |
| trd_0171 protein network | https://string-db.org/network/309801.trd_0171 | Identified by match to protein family HMM PF00534. |
| thiL protein network | https://string-db.org/network/309801.trd_0172 | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thi [...] |
| trd_0173 protein network | https://string-db.org/network/309801.trd_0173 | glutamyl-tRNA(Gln) amidotransferase subunit A; Identified by match to protein family HMM PF01425; Belongs to the amidase family. |
| trd_0174 protein network | https://string-db.org/network/309801.trd_0174 | Uncharacterized P-loop hydrolase UPF0079; Identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150. |
| trd_0175 protein network | https://string-db.org/network/309801.trd_0175 | Putative glycoprotease family; Identified by match to protein family HMM PF00814. |
| trd_0176 protein network | https://string-db.org/network/309801.trd_0176 | Ribosomal-protein-alanine acetyltransferase; Identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575. |
| tsaD protein network | https://string-db.org/network/309801.trd_0177 | O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in t [...] |
| trd_0178 protein network | https://string-db.org/network/309801.trd_0178 | Inositol-1-monophosphatase; Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily. |
| trd_0179 protein network | https://string-db.org/network/309801.trd_0179 | Identified by match to protein family HMM PF00850. |
| hisH protein network | https://string-db.org/network/309801.trd_0180 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydroly [...] |
| hisA protein network | https://string-db.org/network/309801.trd_0181 | Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007. |
| trd_0182 protein network | https://string-db.org/network/309801.trd_0182 | Conserved hypothetical protein. |
| hisF protein network | https://string-db.org/network/309801.trd_0183 | Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that p [...] |
| trd_0184 protein network | https://string-db.org/network/309801.trd_0184 | Cell wall-associated hydrolases; Identified by match to protein family HMM PF00877; match to protein family HMM PF08239. |
| trd_0185 protein network | https://string-db.org/network/309801.trd_0185 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0186 protein network | https://string-db.org/network/309801.trd_0186 | Putative permease. |
| trd_0187 protein network | https://string-db.org/network/309801.trd_0187 | Putative ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. |
| recA protein network | https://string-db.org/network/309801.trd_0188 | recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...] |
| trd_0189 protein network | https://string-db.org/network/309801.trd_0189 | Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153. |
| trd_0190 protein network | https://string-db.org/network/309801.trd_0190 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| trd_0191 protein network | https://string-db.org/network/309801.trd_0191 | Putative Cobalt transport protein; Identified by match to protein family HMM PF02361. |
| trd_0192 protein network | https://string-db.org/network/309801.trd_0192 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0193 protein network | https://string-db.org/network/309801.trd_0193 | Prenyltransferase and squalene oxidase repeat domain protein. |
| trd_0194 protein network | https://string-db.org/network/309801.trd_0194 | 1,3-propanediol dehydrogenase; Identified by match to protein family HMM PF00465. |
| trd_0195 protein network | https://string-db.org/network/309801.trd_0195 | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formati [...] |
| recO protein network | https://string-db.org/network/309801.trd_0196 | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. |
| trd_0197 protein network | https://string-db.org/network/309801.trd_0197 | Putative aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM PF01791; match to protein family HMM PF02581; match to protein family HMM TIGR01182. |
| trd_0198 protein network | https://string-db.org/network/309801.trd_0198 | Conserved hypothetical protein. |
| nadK protein network | https://string-db.org/network/309801.trd_0199 | Putative NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'- [...] |
| trd_0200 protein network | https://string-db.org/network/309801.trd_0200 | Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153. |
| tmk protein network | https://string-db.org/network/309801.trd_0201 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. |
| trd_0202 protein network | https://string-db.org/network/309801.trd_0202 | Identified by match to protein family HMM PF01424. |
| trd_0203 protein network | https://string-db.org/network/309801.trd_0203 | Hypothetical protein; Identified by glimmer; putative. |
| recR protein network | https://string-db.org/network/309801.trd_0204 | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. |
| trd_0205 protein network | https://string-db.org/network/309801.trd_0205 | DNA translocase ftsK; Identified by match to protein family HMM PF01580. |
| trd_0206 protein network | https://string-db.org/network/309801.trd_0206 | Phage DNA polymerase-related protein; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758. |
| trd_0207 protein network | https://string-db.org/network/309801.trd_0207 | DNA polymerase III, epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM TIGR0 [...] |
| trd_0208 protein network | https://string-db.org/network/309801.trd_0208 | Hypothetical protein; Identified by glimmer; putative. |
| pyrE protein network | https://string-db.org/network/309801.trd_0209 | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). |
| ligA protein network | https://string-db.org/network/309801.trd_0210 | DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...] |
| trd_0211 protein network | https://string-db.org/network/309801.trd_0211 | Vacuolar cation/proton exchanger 1a; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| carB protein network | https://string-db.org/network/309801.trd_0212 | Carbamoyl-phosphate synthase, large subunit; Identified by match to protein family HMM PF00289; match to protein family HMM PF01071; match to protein family HMM PF02142; match to protein family H [...] |
| carA protein network | https://string-db.org/network/309801.trd_0213 | Carbamoyl-phosphate synthase, small subunit; Identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; Belongs to the CarA fam [...] |
| pyrC protein network | https://string-db.org/network/309801.trd_0214 | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. |
| maf protein network | https://string-db.org/network/309801.trd_0215 | Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nu [...] |
| rumA protein network | https://string-db.org/network/309801.trd_0216 | 23S rRNA (uracil-5-)-methyltransferase RumA; Identified by match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; Belongs to the class I- [...] |
| speH protein network | https://string-db.org/network/309801.trd_0217 | S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of th [...] |
| speE protein network | https://string-db.org/network/309801.trd_0218 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermid [...] |
| trd_0219 protein network | https://string-db.org/network/309801.trd_0219 | Conserved hypothetical protein. |
| trd_0220 protein network | https://string-db.org/network/309801.trd_0220 | Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. |
| trd_0221 protein network | https://string-db.org/network/309801.trd_0221 | Putative permease domain protein; Identified by match to protein family HMM PF02687. |
| trd_0222 protein network | https://string-db.org/network/309801.trd_0222 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0223 protein network | https://string-db.org/network/309801.trd_0223 | Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496. |
| trd_0224 protein network | https://string-db.org/network/309801.trd_0224 | Putative ABC superfamily (atp&memb) transport protein; Identified by match to protein family HMM PF00005. |
| trd_0225 protein network | https://string-db.org/network/309801.trd_0225 | Transglycosylase associated protein; Identified by match to protein family HMM PF04226. |
| trmD protein network | https://string-db.org/network/309801.trd_0226 | tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. |
| trd_0227 protein network | https://string-db.org/network/309801.trd_0227 | HD domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. |
| trd_0228 protein network | https://string-db.org/network/309801.trd_0228 | Hypothetical protein; Identified by glimmer; putative. |
| rfbB protein network | https://string-db.org/network/309801.trd_0229 | dTDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; mat [...] |
| trd_0230 protein network | https://string-db.org/network/309801.trd_0230 | Putative Stage II sporulation protein E (SpoIIE); Identified by match to protein family HMM PF07228. |
| trd_0231 protein network | https://string-db.org/network/309801.trd_0231 | Conserved hypothetical protein. |
| trd_0232 protein network | https://string-db.org/network/309801.trd_0232 | Putative oligopeptide-binding protein; Identified by match to protein family HMM PF00496. |
| trd_0233 protein network | https://string-db.org/network/309801.trd_0233 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. |
| aroC protein network | https://string-db.org/network/309801.trd_0234 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch poin [...] |
| aroA protein network | https://string-db.org/network/309801.trd_0235 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl [...] |
| trd_0236 protein network | https://string-db.org/network/309801.trd_0236 | dTDP-4-dehydrorhamnose 3,5-epimerase. |
| trd_0237 protein network | https://string-db.org/network/309801.trd_0237 | Putative S-adenosylmethionine (SAM)-dependent methyltransferase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242. |
| smpB protein network | https://string-db.org/network/309801.trd_0238 | SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...] |
| trd_0240 protein network | https://string-db.org/network/309801.trd_0240 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0241 protein network | https://string-db.org/network/309801.trd_0241 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0242 protein network | https://string-db.org/network/309801.trd_0242 | Conserved hypothetical protein; Identified by match to protein family HMM PF01878. |
| trd_0243 protein network | https://string-db.org/network/309801.trd_0243 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0244 protein network | https://string-db.org/network/309801.trd_0244 | Conserved hypothetical protein. |
| trd_0245 protein network | https://string-db.org/network/309801.trd_0245 | Identified by match to protein family HMM PF04909. |
| trd_0246 protein network | https://string-db.org/network/309801.trd_0246 | D-threo-aldose 1-dehydrogenase; Identified by match to protein family HMM PF00248. |
| trd_0247 protein network | https://string-db.org/network/309801.trd_0247 | Protein of unknown function (DUF718) superfamily; Identified by match to protein family HMM PF05336. |
| trd_0248 protein network | https://string-db.org/network/309801.trd_0248 | Putative dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659. |
| trd_0249 protein network | https://string-db.org/network/309801.trd_0249 | Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528. |
| trd_0250 protein network | https://string-db.org/network/309801.trd_0250 | Transporter; Identified by match to protein family HMM PF00528. |
| trd_0251 protein network | https://string-db.org/network/309801.trd_0251 | Putative ABC transporter solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. |
| trd_0252 protein network | https://string-db.org/network/309801.trd_0252 | Transcriptional regulator, IclR family, C-terminal domain protein; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339. |
| trd_0253 protein network | https://string-db.org/network/309801.trd_0253 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0254 protein network | https://string-db.org/network/309801.trd_0254 | Conserved hypothetical protein. |
| trd_0255 protein network | https://string-db.org/network/309801.trd_0255 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0256 protein network | https://string-db.org/network/309801.trd_0256 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0257 protein network | https://string-db.org/network/309801.trd_0257 | Putative amino acid ABC transporter, periplasmic amino-acid binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may nee [...] |
| trd_0258 protein network | https://string-db.org/network/309801.trd_0258 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0259 protein network | https://string-db.org/network/309801.trd_0259 | Putative ABC transport system, substrate-binding protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or th [...] |
| trd_0260 protein network | https://string-db.org/network/309801.trd_0260 | Glycolate oxidase subunit glcD; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| trd_0261 protein network | https://string-db.org/network/309801.trd_0261 | Glycolate oxidase subunit glcE; Identified by match to protein family HMM PF01565; match to protein family HMM PF02913. |
| trd_0262 protein network | https://string-db.org/network/309801.trd_0262 | 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function, cysteine-rich region; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754. |
| trd_0263 protein network | https://string-db.org/network/309801.trd_0263 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0264 protein network | https://string-db.org/network/309801.trd_0264 | Acylamino-acid-releasing enzyme (ec) (acyl-peptide hydrolase) (aph); Identified by match to protein family HMM PF00326; match to protein family HMM PF01738; match to protein family HMM PF07676. |
| sbcD protein network | https://string-db.org/network/309801.trd_0265 | Putative nuclease SbcCD, D subunit subfamily; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The [...] |
| trd_0266 protein network | https://string-db.org/network/309801.trd_0266 | Domain of unknown function domain protein; Identified by match to protein family HMM PF01935. |
| trd_0267 protein network | https://string-db.org/network/309801.trd_0267 | Probable two component sensor kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07568. |
| trd_0268 protein network | https://string-db.org/network/309801.trd_0268 | Putative short chain dehydrogenase; Identified by match to protein family HMM PF00106. |
| trd_0269 protein network | https://string-db.org/network/309801.trd_0269 | Putative aminopeptidase from family M42; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343. |
| trd_0270 protein network | https://string-db.org/network/309801.trd_0270 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0271 protein network | https://string-db.org/network/309801.trd_0271 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0272 protein network | https://string-db.org/network/309801.trd_0272 | Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005. |
| trd_0273 protein network | https://string-db.org/network/309801.trd_0273 | Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687. |
| trd_0274 protein network | https://string-db.org/network/309801.trd_0274 | Putative membrane protein; Identified by match to protein family HMM PF07907. |
| trd_0275 protein network | https://string-db.org/network/309801.trd_0275 | methylated-DNA-[protein]-cysteine S-methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the c [...] |
| trd_0276 protein network | https://string-db.org/network/309801.trd_0276 | methylated-DNA--protein-cysteine methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curr [...] |
| trd_0277 protein network | https://string-db.org/network/309801.trd_0277 | Putative integral membrane protein; Identified by match to protein family HMM PF01694. |
| trd_0278 protein network | https://string-db.org/network/309801.trd_0278 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0279 protein network | https://string-db.org/network/309801.trd_0279 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0280 protein network | https://string-db.org/network/309801.trd_0280 | Phosphoglycolate phosphatase; Identified by match to protein family HMM PF00702. |
| trd_0281 protein network | https://string-db.org/network/309801.trd_0281 | Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. |
| trd_0282 protein network | https://string-db.org/network/309801.trd_0282 | Putative integral membrane protein; Identified by match to protein family HMM PF00892. |
| trd_0283 protein network | https://string-db.org/network/309801.trd_0283 | Identified by match to protein family HMM PF00753. |
| trd_0284 protein network | https://string-db.org/network/309801.trd_0284 | Curved DNA-binding protein; Identified by match to protein family HMM PF00226. |
| trd_0285 protein network | https://string-db.org/network/309801.trd_0285 | Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family. |
| trd_0286 protein network | https://string-db.org/network/309801.trd_0286 | Putative lipoprotein. |
| trd_0287 protein network | https://string-db.org/network/309801.trd_0287 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0288 protein network | https://string-db.org/network/309801.trd_0288 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0289 protein network | https://string-db.org/network/309801.trd_0289 | Bkrf1 encodes ebna-1 protein-like protein. |
| ftsH1 protein network | https://string-db.org/network/309801.trd_0293 | Metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; In t [...] |
| trd_0294 protein network | https://string-db.org/network/309801.trd_0294 | Hypothetical protein; Identified by glimmer; putative. |
| tilS protein network | https://string-db.org/network/309801.trd_0295 | Putative bifunctional protein tilS/hprT; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. C [...] |
| trd_0297 protein network | https://string-db.org/network/309801.trd_0297 | Oxidoreductase, short-chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. |
| trd_0298 protein network | https://string-db.org/network/309801.trd_0298 | Putative 3-oxoacyl-(acyl carrier protein) reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. |
| trd_0301 protein network | https://string-db.org/network/309801.trd_0301 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0302 protein network | https://string-db.org/network/309801.trd_0302 | 3-oxoadipate CoA-succinyl transferase beta subunit; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02428. |
| trd_0303 protein network | https://string-db.org/network/309801.trd_0303 | IpsJ protein; Identified by match to protein family HMM PF01144; match to protein family HMM TIGR02429. |
| trd_0304 protein network | https://string-db.org/network/309801.trd_0304 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0305 protein network | https://string-db.org/network/309801.trd_0305 | ATP-dependent DNA helicase pcrA; Identified by match to protein family HMM PF00580. |
| ppdK protein network | https://string-db.org/network/309801.trd_0306 | Pyruvate, phosphate dikinase; Identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; B [...] |
| trd_0307 protein network | https://string-db.org/network/309801.trd_0307 | Putative aromatic metabolite ABC transporter; Identified by match to protein family HMM PF00903. |
| trd_0308 protein network | https://string-db.org/network/309801.trd_0308 | Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. |
| trd_0309 protein network | https://string-db.org/network/309801.trd_0309 | Biuret hydrolase; Identified by match to protein family HMM PF01425; Belongs to the amidase family. |
| trd_0310 protein network | https://string-db.org/network/309801.trd_0310 | OsmC-like protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be mer [...] |
| trd_0311 protein network | https://string-db.org/network/309801.trd_0311 | Probable transferase protein. |
| trd_0312 protein network | https://string-db.org/network/309801.trd_0312 | Putative halocarboxylic acid dehalogenase DehI. |
| trd_0313 protein network | https://string-db.org/network/309801.trd_0313 | Putative conserved protein. |
| rlmN protein network | https://string-db.org/network/309801.trd_0314 | Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. |
| trd_0315 protein network | https://string-db.org/network/309801.trd_0315 | Conserved hypothetical protein TIGR00299; Identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; Belongs to the LarC family. |
| trd_0316 protein network | https://string-db.org/network/309801.trd_0316 | ZIP zinc transporter family protein; Identified by match to protein family HMM PF02535. |
| trd_0317 protein network | https://string-db.org/network/309801.trd_0317 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. |
| trd_0318 protein network | https://string-db.org/network/309801.trd_0318 | Putative ABC transport proteins, inner membrane component; Identified by match to protein family HMM PF00528. |
| trd_0319 protein network | https://string-db.org/network/309801.trd_0319 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0321 protein network | https://string-db.org/network/309801.trd_0321 | Conserved hypothetical protein. |
| trd_0322 protein network | https://string-db.org/network/309801.trd_0322 | Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211. |
| trd_0323 protein network | https://string-db.org/network/309801.trd_0323 | Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...] |
| trd_0324 protein network | https://string-db.org/network/309801.trd_0324 | Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current [...] |
| trd_0325 protein network | https://string-db.org/network/309801.trd_0325 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0326 protein network | https://string-db.org/network/309801.trd_0326 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_0327 protein network | https://string-db.org/network/309801.trd_0327 | Putative membrane protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...] |
| trd_0328 protein network | https://string-db.org/network/309801.trd_0328 | Transcriptional regulator, ArsR family protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF01978; match to protein family HMM PF08279. |
| trd_0329 protein network | https://string-db.org/network/309801.trd_0329 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0330 protein network | https://string-db.org/network/309801.trd_0330 | Succinate dehydrogenase iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase ir [...] |
| nadB protein network | https://string-db.org/network/309801.trd_0331 | Succinate dehydrogenase, flavoprotein subunit; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family [...] |
| trd_0332 protein network | https://string-db.org/network/309801.trd_0332 | Succinate dehydrogenase, membrane subunit. |
| trd_0333 protein network | https://string-db.org/network/309801.trd_0333 | Succinate dehydrogenase, cytochrome subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. |
| trd_0334 protein network | https://string-db.org/network/309801.trd_0334 | Peptidase, M20/M25/M40 family; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. |
| dinG protein network | https://string-db.org/network/309801.trd_0335 | Exonuclease family; 3'-5' exonuclease. |
| glpX protein network | https://string-db.org/network/309801.trd_0336 | Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330. |
| rho protein network | https://string-db.org/network/309801.trd_0337 | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...] |
| trd_0338 protein network | https://string-db.org/network/309801.trd_0338 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0339 protein network | https://string-db.org/network/309801.trd_0339 | Putative hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. |
| trd_0340 protein network | https://string-db.org/network/309801.trd_0340 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_0341 protein network | https://string-db.org/network/309801.trd_0341 | Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. |
| trd_0342 protein network | https://string-db.org/network/309801.trd_0342 | Predicted ABC-type ATPase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need t [...] |
| prmA protein network | https://string-db.org/network/309801.trd_0343 | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. |
| trd_0344 protein network | https://string-db.org/network/309801.trd_0344 | Putative glucose-1-phosphate thymidylyltransferase; Identified by match to protein family HMM PF00483. |
| trd_0346 protein network | https://string-db.org/network/309801.trd_0346 | Conserved hypothetical protein. |
| coaBC protein network | https://string-db.org/network/309801.trd_0347 | Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantot [...] |
| trd_0348 protein network | https://string-db.org/network/309801.trd_0348 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0349 protein network | https://string-db.org/network/309801.trd_0349 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0350 protein network | https://string-db.org/network/309801.trd_0350 | Putative peptide chain release factor subunit 1. |
| trd_0351 protein network | https://string-db.org/network/309801.trd_0351 | Diacylglycerol kinase catalytic domain (presumed) protein; Identified by match to protein family HMM PF00781. |
| trd_0352 protein network | https://string-db.org/network/309801.trd_0352 | Conserved hypothetical protein. |
| trd_0353 protein network | https://string-db.org/network/309801.trd_0353 | Hypothetical protein; Identified by glimmer; putative. |
| miaB protein network | https://string-db.org/network/309801.trd_0354 | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...] |
| trd_0355 protein network | https://string-db.org/network/309801.trd_0355 | TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. |
| trd_0356 protein network | https://string-db.org/network/309801.trd_0356 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0357 protein network | https://string-db.org/network/309801.trd_0357 | Protein of unknown function superfamily; Identified by match to protein family HMM PF01887. |
| ggt protein network | https://string-db.org/network/309801.trd_0358 | Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066. |
| mobA protein network | https://string-db.org/network/309801.trd_0359 | Molybdopterin-guanine dinucleotide biosynthesis protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinuc [...] |
| trd_0360 protein network | https://string-db.org/network/309801.trd_0360 | SWIM zinc finger domain protein; Identified by match to protein family HMM PF04434. |
| trd_0361 protein network | https://string-db.org/network/309801.trd_0361 | Conserved hypothetical protein. |
| trd_0362 protein network | https://string-db.org/network/309801.trd_0362 | Identified by match to protein family HMM PF01522. |
| trd_0363 protein network | https://string-db.org/network/309801.trd_0363 | Probable acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...] |
| trd_0364 protein network | https://string-db.org/network/309801.trd_0364 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0365 protein network | https://string-db.org/network/309801.trd_0365 | 2-isopropylmalate synthase/homocitrate synthase family protein; Identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00977; Belo [...] |
| asd protein network | https://string-db.org/network/309801.trd_0366 | Aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; Belongs to the aspartate-semia [...] |
| trd_0367 protein network | https://string-db.org/network/309801.trd_0367 | Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF03447. |
| metX protein network | https://string-db.org/network/309801.trd_0368 | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. |
| trd_0369 protein network | https://string-db.org/network/309801.trd_0369 | Putative AttH. |
| trd_0370 protein network | https://string-db.org/network/309801.trd_0370 | Putative membrane protein mmpL3; Identified by match to protein family HMM PF03176. |
| trd_0371 protein network | https://string-db.org/network/309801.trd_0371 | Trehalose-6-phosphate synthase; Identified by match to protein family HMM PF00982. |
| trd_0372 protein network | https://string-db.org/network/309801.trd_0372 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0373 protein network | https://string-db.org/network/309801.trd_0373 | Halocyanin precursor-like protein; Identified by match to protein family HMM PF00127; match to protein family HMM TIGR01409. |
| trd_0374 protein network | https://string-db.org/network/309801.trd_0374 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. |
| trd_0375 protein network | https://string-db.org/network/309801.trd_0375 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0376 protein network | https://string-db.org/network/309801.trd_0376 | Domain of unknown function domain protein; Identified by match to protein family HMM PF01883. |
| trd_0377 protein network | https://string-db.org/network/309801.trd_0377 | SUF system FeS assembly protein, NifU family; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994. |
| trd_0378 protein network | https://string-db.org/network/309801.trd_0378 | Cysteine desulfurase; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dep [...] |
| sufD protein network | https://string-db.org/network/309801.trd_0379 | FeS assembly protein SufD; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981. |
| sufB protein network | https://string-db.org/network/309801.trd_0380 | FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980. |
| sufC protein network | https://string-db.org/network/309801.trd_0381 | FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978. |
| trd_0382 protein network | https://string-db.org/network/309801.trd_0382 | Transcriptional regulator, Fur family; Identified by match to protein family HMM PF01475; Belongs to the Fur family. |
| trd_0383 protein network | https://string-db.org/network/309801.trd_0383 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0384 protein network | https://string-db.org/network/309801.trd_0384 | Identified by match to protein family HMM PF01592. |
| trd_0385 protein network | https://string-db.org/network/309801.trd_0385 | Putative DNA polymerase III, epsilon chain (EC); Identified by match to protein family HMM PF00929. |
| trd_0386 protein network | https://string-db.org/network/309801.trd_0386 | Metallo-beta-lactamase domain protein; Identified by match to protein family HMM PF00753; Belongs to the UPF0173 family. |
| trd_0387 protein network | https://string-db.org/network/309801.trd_0387 | Identified by match to protein family HMM PF07969. |
| trd_0388 protein network | https://string-db.org/network/309801.trd_0388 | Identified by match to protein family HMM PF07969. |
| trd_0389 protein network | https://string-db.org/network/309801.trd_0389 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0390 protein network | https://string-db.org/network/309801.trd_0390 | Putative saccharide deacetylase, slightly; Identified by match to protein family HMM PF01522. |
| trd_0391 protein network | https://string-db.org/network/309801.trd_0391 | Cysteine desulfurase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01053. |
| trd_0392 protein network | https://string-db.org/network/309801.trd_0392 | Methionine gamma-lyase; Identified by match to protein family HMM PF01053; match to protein family HMM PF01212. |
| trd_0393 protein network | https://string-db.org/network/309801.trd_0393 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0394 protein network | https://string-db.org/network/309801.trd_0394 | Putative ABC transporter, substrate binding protein (oligopeptide); Identified by match to protein family HMM PF00496. |
| trd_0395 protein network | https://string-db.org/network/309801.trd_0395 | Oligopeptide transport system permease protein oppB; Identified by match to protein family HMM PF00528. |
| trd_0396 protein network | https://string-db.org/network/309801.trd_0396 | Oligopeptide transport system permease protein appC; Identified by match to protein family HMM PF00528. |
| trd_0397 protein network | https://string-db.org/network/309801.trd_0397 | Hypothetical protein; Identified by glimmer; putative. |
| thiD protein network | https://string-db.org/network/309801.trd_0398 | Phosphomethylpyrimidine kinase; Identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097. |
| thiG protein network | https://string-db.org/network/309801.trd_0399 | Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxy [...] |
| thiE protein network | https://string-db.org/network/309801.trd_0400 | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...] |
| thiE-2 protein network | https://string-db.org/network/309801.trd_0401 | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...] |
| thiS protein network | https://string-db.org/network/309801.trd_0402 | Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM PF02824; match to protein family HMM TIGR01683. |
| trd_0403 protein network | https://string-db.org/network/309801.trd_0403 | Putative 6-O-methylguanine DNA methyltransferase family protein; Identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589. |
| trd_0404 protein network | https://string-db.org/network/309801.trd_0404 | Putative membrane protein. |
| secA protein network | https://string-db.org/network/309801.trd_0405 | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...] |
| trd_0406 protein network | https://string-db.org/network/309801.trd_0406 | Glycerol uptake facilitator protein; Identified by match to protein family HMM PF00230; Belongs to the MIP/aquaporin (TC 1.A.8) family. |
| trd_0407 protein network | https://string-db.org/network/309801.trd_0407 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_0408 protein network | https://string-db.org/network/309801.trd_0408 | Protein of unknown function (DUF461) family; Identified by match to protein family HMM PF04314. |
| trd_0409 protein network | https://string-db.org/network/309801.trd_0409 | Identified by match to protein family HMM PF00578; match to protein family HMM PF02630. |
| trd_0410 protein network | https://string-db.org/network/309801.trd_0410 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0411 protein network | https://string-db.org/network/309801.trd_0411 | Lustrin A. |
| trd_0412 protein network | https://string-db.org/network/309801.trd_0412 | Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560. |
| dapB protein network | https://string-db.org/network/309801.trd_0413 | Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate. |
| dapA protein network | https://string-db.org/network/309801.trd_0414 | Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). |
| trd_0415 protein network | https://string-db.org/network/309801.trd_0415 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0416 protein network | https://string-db.org/network/309801.trd_0416 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0417 protein network | https://string-db.org/network/309801.trd_0417 | Identified by match to protein family HMM PF03483. |
| trd_0418 protein network | https://string-db.org/network/309801.trd_0418 | Putative glycosyltransferase; Identified by match to protein family HMM PF00534. |
| dnaG protein network | https://string-db.org/network/309801.trd_0421 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. |
| selA protein network | https://string-db.org/network/309801.trd_0422 | L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. |
| trd_0423 protein network | https://string-db.org/network/309801.trd_0423 | Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; Belongs to the dGTPase family. Type 2 subfam [...] |
| trd_0424 protein network | https://string-db.org/network/309801.trd_0424 | Putative aminomethyltransferase; Identified by match to protein family HMM PF01571; Belongs to the GcvT family. |
| trd_0425 protein network | https://string-db.org/network/309801.trd_0425 | Conserved hypothetical protein. |
| trd_0426 protein network | https://string-db.org/network/309801.trd_0426 | Hypothetical protein; Identified by glimmer; putative. |
| uvrC protein network | https://string-db.org/network/309801.trd_0427 | Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...] |
| trd_0428 protein network | https://string-db.org/network/309801.trd_0428 | Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family. |
| trd_0429 protein network | https://string-db.org/network/309801.trd_0429 | Putative UDP-glucuronosyltransferase. |
| trd_0430 protein network | https://string-db.org/network/309801.trd_0430 | Putative membrane protein. |
| trd_0431 protein network | https://string-db.org/network/309801.trd_0431 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0432 protein network | https://string-db.org/network/309801.trd_0432 | ATPase, aaa family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07728. |
| rph protein network | https://string-db.org/network/309801.trd_0433 | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucl [...] |
| hisB protein network | https://string-db.org/network/309801.trd_0434 | Imidazoleglycerol-phosphate dehydratase; Identified by match to protein family HMM PF00475. |
| hisC protein network | https://string-db.org/network/309801.trd_0435 | Histidinol-phosphate aminotransferase; Identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; Belongs to the class-II pyridoxal-phosphate-dependent aminotransfe [...] |
| trd_0436 protein network | https://string-db.org/network/309801.trd_0436 | Beta-lactamase; Identified by match to protein family HMM PF00144; match to protein family HMM PF00768; Belongs to the peptidase S11 family. |
| trd_0437 protein network | https://string-db.org/network/309801.trd_0437 | Possible pseudouridine synthase; Identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; Belongs to the pseudouridine syntha [...] |
| cmk protein network | https://string-db.org/network/309801.trd_0438 | Cytidylate kinase; Identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017. |
| trd_0439 protein network | https://string-db.org/network/309801.trd_0439 | Acyltransferase domain protein; Identified by match to protein family HMM PF01553. |
| trd_0440 protein network | https://string-db.org/network/309801.trd_0440 | Domain of unknown function (DUF362) family; Identified by match to protein family HMM PF04015. |
| trd_0441 protein network | https://string-db.org/network/309801.trd_0441 | Penicillin-binding protein dacF precursor; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. |
| trd_0442 protein network | https://string-db.org/network/309801.trd_0442 | HspR; Identified by match to protein family HMM PF00376. |
| clpB protein network | https://string-db.org/network/309801.trd_0443 | Chaperone clpB 1; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the Clp [...] |
| trd_0444 protein network | https://string-db.org/network/309801.trd_0444 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0445 protein network | https://string-db.org/network/309801.trd_0445 | Conserved hypothetical protein. |
| trd_0446 protein network | https://string-db.org/network/309801.trd_0446 | Conserved hypothetical protein. |
| trd_0447 protein network | https://string-db.org/network/309801.trd_0447 | Putative Methionine synthase, vitamin-B12 independent; Identified by match to protein family HMM PF01717. |
| trd_0448 protein network | https://string-db.org/network/309801.trd_0448 | Alcohol dehydrogenase, class III; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...] |
| aroF-2 protein network | https://string-db.org/network/309801.trd_0449 | Phospho-2-dehydro-3-deoxyheptonate aldolase; Identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361. |
| trd_0450 protein network | https://string-db.org/network/309801.trd_0450 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0451 protein network | https://string-db.org/network/309801.trd_0451 | Conserved hypothetical protein. |
| trd_0452 protein network | https://string-db.org/network/309801.trd_0452 | Glycosyl transferases group 1; Identified by match to protein family HMM PF00534. |
| trd_0453 protein network | https://string-db.org/network/309801.trd_0453 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0454 protein network | https://string-db.org/network/309801.trd_0454 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0455 protein network | https://string-db.org/network/309801.trd_0455 | malyl-CoA lyase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. |
| trd_0456 protein network | https://string-db.org/network/309801.trd_0456 | Hypothetical protein; Identified by glimmer; putative. |
| rex protein network | https://string-db.org/network/309801.trd_0457 | Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. |
| trd_0458 protein network | https://string-db.org/network/309801.trd_0458 | Hypothetical protein; Identified by glimmer; putative. |
| nadE protein network | https://string-db.org/network/309801.trd_0459 | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. |
| recN protein network | https://string-db.org/network/309801.trd_0460 | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. |
| trd_0461 protein network | https://string-db.org/network/309801.trd_0461 | Conserved hypothetical protein TIGR00103; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. |
| trd_0462 protein network | https://string-db.org/network/309801.trd_0462 | Putative oxidoreductase; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560. |
| trd_0463 protein network | https://string-db.org/network/309801.trd_0463 | Flavin containing amine oxidase; Identified by match to protein family HMM PF01266. |
| trd_0464 protein network | https://string-db.org/network/309801.trd_0464 | Putative cytochrome c subfamily; Identified by match to protein family HMM PF00034. |
| trd_0465 protein network | https://string-db.org/network/309801.trd_0465 | Conserved hypothetical protein. |
| trd_0466 protein network | https://string-db.org/network/309801.trd_0466 | Probable molybdopterin oxidoreductase, membrane subunit; Identified by match to protein family HMM PF03916. |
| trd_0467 protein network | https://string-db.org/network/309801.trd_0467 | Putative membrane protein. |
| trd_0468 protein network | https://string-db.org/network/309801.trd_0468 | Oxidoreductase, iron-sulfur cluster-binding subunit; Identified by match to protein family HMM PF00037. |
| trd_0469 protein network | https://string-db.org/network/309801.trd_0469 | Putative 4Fe-4S ferredoxin, iron-sulfur binding; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; Belongs to the prokaryotic molybdopterin-containing oxidor [...] |
| trd_0470 protein network | https://string-db.org/network/309801.trd_0470 | Chaperone protein HtpG. |
| trd_0471 protein network | https://string-db.org/network/309801.trd_0471 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0472 protein network | https://string-db.org/network/309801.trd_0472 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0473 protein network | https://string-db.org/network/309801.trd_0473 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0474 protein network | https://string-db.org/network/309801.trd_0474 | Putative membrane protein. |
| trd_0475 protein network | https://string-db.org/network/309801.trd_0475 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0476 protein network | https://string-db.org/network/309801.trd_0476 | Transketolase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged [...] |
| trd_0477 protein network | https://string-db.org/network/309801.trd_0477 | Transketolase, pyridine binding domain protein; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. |
| rpiA protein network | https://string-db.org/network/309801.trd_0478 | Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. |
| trd_0479 protein network | https://string-db.org/network/309801.trd_0479 | Putative integral membrane protein. |
| trd_0480 protein network | https://string-db.org/network/309801.trd_0480 | LysM domain protein; Identified by match to protein family HMM PF01476. |
| trd_0481 protein network | https://string-db.org/network/309801.trd_0481 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0482 protein network | https://string-db.org/network/309801.trd_0482 | NAD(P) transhydrogenase subunit alpha part 1; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current ge [...] |
| trd_0483 protein network | https://string-db.org/network/309801.trd_0483 | NAD(P) transhydrogenase, alpha-2 subunit. |
| trd_0484 protein network | https://string-db.org/network/309801.trd_0484 | NAD(P) transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the [...] |
| trd_0485 protein network | https://string-db.org/network/309801.trd_0485 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0486 protein network | https://string-db.org/network/309801.trd_0486 | Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC [...] |
| trd_0487 protein network | https://string-db.org/network/309801.trd_0487 | Carboxyl-terminal processing protease; Identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; Belongs to the peptidase S41A [...] |
| trd_0488 protein network | https://string-db.org/network/309801.trd_0488 | Similar to BH1559 unknown conserved protein in B. subtilis; identified by match to protein family HMM PF03745. |
| trd_0489 protein network | https://string-db.org/network/309801.trd_0489 | Uncharacterized proteins, LmbE homolog; Identified by match to protein family HMM PF02585. |
| trd_0490 protein network | https://string-db.org/network/309801.trd_0490 | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. |
| uppP protein network | https://string-db.org/network/309801.trd_0491 | Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. |
| trd_0492 protein network | https://string-db.org/network/309801.trd_0492 | Putative transport protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. |
| trd_0493 protein network | https://string-db.org/network/309801.trd_0493 | Protein csaA; Identified by match to protein family HMM PF01588; match to protein family HMM TIGR02222. |
| trd_0494 protein network | https://string-db.org/network/309801.trd_0494 | Identified by match to protein family HMM PF00293. |
| aceB protein network | https://string-db.org/network/309801.trd_0495 | Malate synthase A; Identified by match to protein family HMM PF01274; match to protein family HMM TIGR01344; Belongs to the malate synthase family. |
| trd_0496 protein network | https://string-db.org/network/309801.trd_0496 | Isocitrate lyase; Identified by match to protein family HMM PF00463. |
| trd_0497 protein network | https://string-db.org/network/309801.trd_0497 | RuBisCO operon transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. |
| trd_0498 protein network | https://string-db.org/network/309801.trd_0498 | Protein of unknown function superfamily; Identified by match to protein family HMM PF01904. |
| trd_0499 protein network | https://string-db.org/network/309801.trd_0499 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0501 protein network | https://string-db.org/network/309801.trd_0501 | P49 secreted protein. |
| ribD protein network | https://string-db.org/network/309801.trd_0502 | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...] |
| ribE protein network | https://string-db.org/network/309801.trd_0503 | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. |
| ribBA protein network | https://string-db.org/network/309801.trd_0504 | Riboflavin biosynthesis protein ribA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohy [...] |
| ribH protein network | https://string-db.org/network/309801.trd_0505 | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...] |
| trd_0506 protein network | https://string-db.org/network/309801.trd_0506 | Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family. |
| trd_0507 protein network | https://string-db.org/network/309801.trd_0507 | MitC; Identified by match to protein family HMM PF02585. |
| selB protein network | https://string-db.org/network/309801.trd_0508 | Selenocysteine-specific translation elongation factor; Identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09106; match to protei [...] |
| trd_0509 protein network | https://string-db.org/network/309801.trd_0509 | Protein of unknown function, DUF255 family; Identified by match to protein family HMM PF03190. |
| trd_0510 protein network | https://string-db.org/network/309801.trd_0510 | Putative amidase; Identified by match to protein family HMM PF03069. |
| trd_0511 protein network | https://string-db.org/network/309801.trd_0511 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0512 protein network | https://string-db.org/network/309801.trd_0512 | Conserved hypothetical protein; Identified by match to protein family HMM PF07920. |
| pepA protein network | https://string-db.org/network/309801.trd_0513 | PepB protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. |
| trd_0514 protein network | https://string-db.org/network/309801.trd_0514 | Conserved hypothetical protein TIGR00149; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. |
| trd_0515 protein network | https://string-db.org/network/309801.trd_0515 | Possible DNA binding protein; Identified by match to protein family HMM PF01381. |
| trd_0516 protein network | https://string-db.org/network/309801.trd_0516 | Methyltransferase, UbiE/COQ5 family; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_0517 protein network | https://string-db.org/network/309801.trd_0517 | 3-mercaptopyruvate sulfurtransferase; Identified by match to protein family HMM PF00581. |
| trd_0518 protein network | https://string-db.org/network/309801.trd_0518 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0519 protein network | https://string-db.org/network/309801.trd_0519 | Uncharacterized domain HDIG protein; Identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277. |
| trd_0520 protein network | https://string-db.org/network/309801.trd_0520 | Spermidine/putrescine-binding periplasmic protein precursor; Identified by match to protein family HMM PF01547. |
| trd_0521 protein network | https://string-db.org/network/309801.trd_0521 | ABC-type spermidine/putrescine transport system, permease component II; Identified by match to protein family HMM PF00528. |
| trd_0522 protein network | https://string-db.org/network/309801.trd_0522 | Spermidine/putrescine transport system permease protein potB; Identified by match to protein family HMM PF00528. |
| potA protein network | https://string-db.org/network/309801.trd_0523 | ATP-binding component of putrescine transport system; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system [...] |
| trd_0524 protein network | https://string-db.org/network/309801.trd_0524 | Folylpolyglutamate synthase; Identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499. |
| trd_0525 protein network | https://string-db.org/network/309801.trd_0525 | Putative membrane protein. |
| trd_0526 protein network | https://string-db.org/network/309801.trd_0526 | Mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. |
| trd_0527 protein network | https://string-db.org/network/309801.trd_0527 | 3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. |
| trd_0528 protein network | https://string-db.org/network/309801.trd_0528 | Putative agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. |
| trd_0529 protein network | https://string-db.org/network/309801.trd_0529 | Putative agmatinase; Identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; Belongs to the arginase family. |
| trd_0530 protein network | https://string-db.org/network/309801.trd_0530 | Putative aminomethyltransferase protein. |
| ureC protein network | https://string-db.org/network/309801.trd_0531 | Urease alpha subunit; Identified by match to protein family HMM PF00449; match to protein family HMM PF01979; match to protein family HMM PF07969. |
| ureB protein network | https://string-db.org/network/309801.trd_0532 | Urease, beta subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| ureA protein network | https://string-db.org/network/309801.trd_0533 | Urease, gamma subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_0534 protein network | https://string-db.org/network/309801.trd_0534 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0535 protein network | https://string-db.org/network/309801.trd_0535 | DNA binding domain, excisionase family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764. |
| trd_0536 protein network | https://string-db.org/network/309801.trd_0536 | Hypothetical protein; Identified by glimmer; putative. |
| rpsU protein network | https://string-db.org/network/309801.trd_0537 | Ribosomal protein S21; Identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family. |
| trd_0538 protein network | https://string-db.org/network/309801.trd_0538 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_0539 protein network | https://string-db.org/network/309801.trd_0539 | TENA/THI-4 family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to t [...] |
| trd_0540 protein network | https://string-db.org/network/309801.trd_0540 | TENA/THI-4 family; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, cataly [...] |
| trd_0541 protein network | https://string-db.org/network/309801.trd_0541 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0542 protein network | https://string-db.org/network/309801.trd_0542 | Glucose-1-phosphate thymidylyltransferase; Identified by match to protein family HMM PF00483. |
| argS protein network | https://string-db.org/network/309801.trd_0543 | arginyl-tRNA synthetase; Identified by match to protein family HMM PF00750; match to protein family HMM PF05746; match to protein family HMM TIGR00456. |
| trd_0544 protein network | https://string-db.org/network/309801.trd_0544 | Probable transcription regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. |
| trd_0545 protein network | https://string-db.org/network/309801.trd_0545 | Hypothetical protein; Identified by glimmer; putative. |
| dcd protein network | https://string-db.org/network/309801.trd_0546 | Deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. |
| trd_0547 protein network | https://string-db.org/network/309801.trd_0547 | Putative ATP:cob(I)alamin adenosyltransferase; Identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; Belongs to the Cob(I)alamin adenosyltransferase family. |
| trd_0548 protein network | https://string-db.org/network/309801.trd_0548 | ABC-2 type transporter superfamily; Identified by match to protein family HMM PF01061. |
| trd_0549 protein network | https://string-db.org/network/309801.trd_0549 | Multidrug ABC transporter, ATP-binding protein. |
| trd_0550 protein network | https://string-db.org/network/309801.trd_0550 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0551 protein network | https://string-db.org/network/309801.trd_0551 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0552 protein network | https://string-db.org/network/309801.trd_0552 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0553 protein network | https://string-db.org/network/309801.trd_0553 | Putative integrase; Identified by match to protein family HMM PF00589; Belongs to the 'phage' integrase family. |
| trd_0554 protein network | https://string-db.org/network/309801.trd_0554 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188. |
| trd_0555 protein network | https://string-db.org/network/309801.trd_0555 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0557 protein network | https://string-db.org/network/309801.trd_0557 | Cytochrome c oxidase (bo3-type) subunit II; Identified by match to protein family HMM PF00116; match to protein family HMM PF00127. |
| trd_0558 protein network | https://string-db.org/network/309801.trd_0558 | Cytochrome c oxidase subunit 1; Identified by match to protein family HMM PF00115. |
| trd_0559 protein network | https://string-db.org/network/309801.trd_0559 | Probable acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...] |
| trd_0560 protein network | https://string-db.org/network/309801.trd_0560 | Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. |
| sucB protein network | https://string-db.org/network/309801.trd_0561 | 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion [...] |
| sucA protein network | https://string-db.org/network/309801.trd_0562 | 2-oxoglutarate dehydrogenase, E1 component; Identified by match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239. |
| trd_0563 protein network | https://string-db.org/network/309801.trd_0563 | Putative FAD binding domain; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. |
| mgtE protein network | https://string-db.org/network/309801.trd_0564 | Magnesium transporter; Acts as a magnesium transporter. |
| trd_0565 protein network | https://string-db.org/network/309801.trd_0565 | Zn-dependent hydrolase; Identified by match to protein family HMM PF00753. |
| trd_0566 protein network | https://string-db.org/network/309801.trd_0566 | Putative membrane protein; Identified by match to protein family HMM PF07690. |
| trd_0567 protein network | https://string-db.org/network/309801.trd_0567 | PHP domain protein; Identified by match to protein family HMM PF02811. |
| trd_0569 protein network | https://string-db.org/network/309801.trd_0569 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0570 protein network | https://string-db.org/network/309801.trd_0570 | Hypothetical protein; Identified by glimmer; putative. |
| arcC protein network | https://string-db.org/network/309801.trd_0571 | Carbamate kinase; Identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; Belongs to the carbamate kinase family. |
| trd_0572 protein network | https://string-db.org/network/309801.trd_0572 | Protein of unknown function (DUF1116) superfamily; Identified by match to protein family HMM PF06545. |
| trd_0573 protein network | https://string-db.org/network/309801.trd_0573 | Protein fdrA; Identified by match to protein family HMM PF06263. |
| trd_0575 protein network | https://string-db.org/network/309801.trd_0575 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0577 protein network | https://string-db.org/network/309801.trd_0577 | Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450. |
| trd_0578 protein network | https://string-db.org/network/309801.trd_0578 | Aldehyde oxidase small subunit; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. |
| trd_0579 protein network | https://string-db.org/network/309801.trd_0579 | Oxidoreductase, large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. |
| trd_0580 protein network | https://string-db.org/network/309801.trd_0580 | Putative polyketide cyclase; Identified by match to protein family HMM PF04199. |
| trd_0581 protein network | https://string-db.org/network/309801.trd_0581 | Putative polyketide cyclase; Identified by match to protein family HMM PF04199. |
| trd_0582 protein network | https://string-db.org/network/309801.trd_0582 | NAD-dependent alcohol dehydrogenase; Identified by match to protein family HMM PF08240; match to protein family HMM TIGR02822. |
| trd_0583 protein network | https://string-db.org/network/309801.trd_0583 | Cation-transport ATPase, E1-E2 family; Identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF0 [...] |
| trd_0584 protein network | https://string-db.org/network/309801.trd_0584 | Putative 4-hydroxybenzoyl-CoA thioesterase. |
| trd_0585 protein network | https://string-db.org/network/309801.trd_0585 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0588 protein network | https://string-db.org/network/309801.trd_0588 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0589 protein network | https://string-db.org/network/309801.trd_0589 | Putative integrase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be me [...] |
| trd_0590 protein network | https://string-db.org/network/309801.trd_0590 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0591 protein network | https://string-db.org/network/309801.trd_0591 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0592 protein network | https://string-db.org/network/309801.trd_0592 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0594 protein network | https://string-db.org/network/309801.trd_0594 | Cytochrome oxidase subunit II; Identified by match to protein family HMM PF00034. |
| nadC protein network | https://string-db.org/network/309801.trd_0595 | Nicotinate-nucleotide pyrophosphorylase; Identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078. |
| nadA protein network | https://string-db.org/network/309801.trd_0596 | Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. |
| trd_0597 protein network | https://string-db.org/network/309801.trd_0597 | Putative pyrimidine precursor biosynthesis enzyme; Identified by match to protein family HMM PF09084. |
| trd_0598 protein network | https://string-db.org/network/309801.trd_0598 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| trd_0599 protein network | https://string-db.org/network/309801.trd_0599 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| rnz protein network | https://string-db.org/network/309801.trd_0603 | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs [...] |
| ggt-2 protein network | https://string-db.org/network/309801.trd_0604 | Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066. |
| trd_0605 protein network | https://string-db.org/network/309801.trd_0605 | Conserved hypothetical protein. |
| trd_0606 protein network | https://string-db.org/network/309801.trd_0606 | Hydrogenase expression/formation; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769. |
| trd_0607 protein network | https://string-db.org/network/309801.trd_0607 | Hypothetical protein; Identified by glimmer; putative. |
| pfkA protein network | https://string-db.org/network/309801.trd_0608 | 6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase t [...] |
| proS protein network | https://string-db.org/network/309801.trd_0609 | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...] |
| rpe protein network | https://string-db.org/network/309801.trd_0613 | Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family. |
| trd_0614 protein network | https://string-db.org/network/309801.trd_0614 | Putative molybdopterin biosynthesis protein. |
| trd_0615 protein network | https://string-db.org/network/309801.trd_0615 | FHA domain protein; Identified by match to protein family HMM PF00498. |
| trd_0616 protein network | https://string-db.org/network/309801.trd_0616 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00498. |
| trd_0617 protein network | https://string-db.org/network/309801.trd_0617 | Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family. |
| trd_0618 protein network | https://string-db.org/network/309801.trd_0618 | DUF167; Identified by match to protein family HMM PF02594; Belongs to the UPF0235 family. |
| trd_0619 protein network | https://string-db.org/network/309801.trd_0619 | Identified by match to protein family HMM PF00535. |
| trd_0620 protein network | https://string-db.org/network/309801.trd_0620 | Conserved hypothetical protein TIGR00268; Identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR00268. |
| trd_0622 protein network | https://string-db.org/network/309801.trd_0622 | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. |
| pnp protein network | https://string-db.org/network/309801.trd_0623 | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. |
| rpsO protein network | https://string-db.org/network/309801.trd_0624 | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several [...] |
| ilvC protein network | https://string-db.org/network/309801.trd_0625 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yie [...] |
| ilvN protein network | https://string-db.org/network/309801.trd_0626 | Acetolactate synthase, small subunit; Identified by match to protein family HMM PF01842; match to protein family HMM TIGR00119. |
| ilvB protein network | https://string-db.org/network/309801.trd_0627 | Acetolactate synthase, large subunit, biosynthetic type; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to prot [...] |
| trd_0628 protein network | https://string-db.org/network/309801.trd_0628 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0629 protein network | https://string-db.org/network/309801.trd_0629 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0630 protein network | https://string-db.org/network/309801.trd_0630 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0632 protein network | https://string-db.org/network/309801.trd_0632 | KDP operon transcriptional regulatory protein kdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| trd_0633 protein network | https://string-db.org/network/309801.trd_0633 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0634 protein network | https://string-db.org/network/309801.trd_0634 | Serinethreonine phosphatase; Similar to chain a, crystal structure of the mycobacterium tuberculosis serinethreonine phosphatase pstpppp at 1.95 a; identified by match to protein family HMM PF004 [...] |
| trd_0635 protein network | https://string-db.org/network/309801.trd_0635 | Identified by match to protein family HMM PF04909. |
| ruvA protein network | https://string-db.org/network/309801.trd_0636 | Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...] |
| hisD protein network | https://string-db.org/network/309801.trd_0637 | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. |
| hisG protein network | https://string-db.org/network/309801.trd_0638 | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate [...] |
| trd_0639 protein network | https://string-db.org/network/309801.trd_0639 | histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587. |
| pheT protein network | https://string-db.org/network/309801.trd_0640 | phenylalanyl-tRNA synthetase, beta subunit; Identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HM [...] |
| pheS protein network | https://string-db.org/network/309801.trd_0641 | phenylalanyl-tRNA synthetase, alpha subunit; Identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; Belongs to the class-II [...] |
| eno protein network | https://string-db.org/network/309801.trd_0642 | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the [...] |
| gpmI protein network | https://string-db.org/network/309801.trd_0643 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. |
| ilvD protein network | https://string-db.org/network/309801.trd_0644 | Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family. |
| purK protein network | https://string-db.org/network/309801.trd_0645 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide [...] |
| purE protein network | https://string-db.org/network/309801.trd_0646 | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). |
| trd_0647 protein network | https://string-db.org/network/309801.trd_0647 | Isocitrate dehydrogenase (NADP); Identified by match to protein family HMM PF00180. |
| trd_0648 protein network | https://string-db.org/network/309801.trd_0648 | Amine oxidase, flavin-containing protein; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. |
| secF protein network | https://string-db.org/network/309801.trd_0649 | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...] |
| secD protein network | https://string-db.org/network/309801.trd_0650 | Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...] |
| nadD protein network | https://string-db.org/network/309801.trd_0651 | Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). |
| gyrA protein network | https://string-db.org/network/309801.trd_0652 | DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...] |
| trd_0653 protein network | https://string-db.org/network/309801.trd_0653 | Putative lipid A biosynthesis lauroyl acyltransferase. |
| trd_0654 protein network | https://string-db.org/network/309801.trd_0654 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0655 protein network | https://string-db.org/network/309801.trd_0655 | Ino1-like myo-inositol-1-phosphate synthase related; Identified by match to protein family HMM PF01658; match to protein family HMM PF07994. |
| trd_0656 protein network | https://string-db.org/network/309801.trd_0656 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0657 protein network | https://string-db.org/network/309801.trd_0657 | Putative heptosyltransferase III WaaQ; Identified by match to protein family HMM PF01075. |
| trd_0658 protein network | https://string-db.org/network/309801.trd_0658 | AprM; Identified by match to protein family HMM PF00534. |
| trd_0659 protein network | https://string-db.org/network/309801.trd_0659 | Lipopolysaccharide core biosynthesis heptosyltransferase; Identified by match to protein family HMM PF01075. |
| trd_0660 protein network | https://string-db.org/network/309801.trd_0660 | Putative glycosyltransferase; Identified by match to protein family HMM PF01075. |
| fabZ protein network | https://string-db.org/network/309801.trd_0661 | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...] |
| purA protein network | https://string-db.org/network/309801.trd_0662 | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...] |
| dnaJ-2 protein network | https://string-db.org/network/309801.trd_0663 | Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...] |
| trd_0664 protein network | https://string-db.org/network/309801.trd_0664 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0665 protein network | https://string-db.org/network/309801.trd_0665 | Conserved hypothetical archeal protein. |
| lexA protein network | https://string-db.org/network/309801.trd_0666 | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causin [...] |
| trd_0667 protein network | https://string-db.org/network/309801.trd_0667 | Hypothetical protein; Identified by glimmer; putative. |
| mutS2 protein network | https://string-db.org/network/309801.trd_0668 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the [...] |
| trd_0669 protein network | https://string-db.org/network/309801.trd_0669 | Conserved hypothetical protein. |
| mfd protein network | https://string-db.org/network/309801.trd_0670 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...] |
| trd_0671 protein network | https://string-db.org/network/309801.trd_0671 | Competence protein ComEA helix-hairpin-helix repeat region; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or [...] |
| trd_0672 protein network | https://string-db.org/network/309801.trd_0672 | ComE-like competence protein; Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360. |
| tuf protein network | https://string-db.org/network/309801.trd_0676 | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. |
| rpmG protein network | https://string-db.org/network/309801.trd_0677 | Ribosomal protein L33; Identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family. |
| secE protein network | https://string-db.org/network/309801.trd_0679 | Preprotein translocase; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. |
| nusG protein network | https://string-db.org/network/309801.trd_0680 | Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination. |
| rplK protein network | https://string-db.org/network/309801.trd_0681 | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
| rplA protein network | https://string-db.org/network/309801.trd_0682 | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. |
| rplJ protein network | https://string-db.org/network/309801.trd_0683 | 50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal prot [...] |
| rplL protein network | https://string-db.org/network/309801.trd_0684 | Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...] |
| trd_0686 protein network | https://string-db.org/network/309801.trd_0686 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF03861. |
| trd_0687 protein network | https://string-db.org/network/309801.trd_0687 | Identified by match to protein family HMM PF07949. |
| dacA protein network | https://string-db.org/network/309801.trd_0688 | Conserved hypothetical protein TIGR00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacter [...] |
| trd_0689 protein network | https://string-db.org/network/309801.trd_0689 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_0690 protein network | https://string-db.org/network/309801.trd_0690 | Putative chromosome replication initiation protein; Identified by match to protein family HMM PF00308; match to protein family HMM PF01695. |
| trd_0691 protein network | https://string-db.org/network/309801.trd_0691 | Putative dnaD/phage-associated domain protein; Identified by match to protein family HMM PF04271; match to protein family HMM TIGR01446. |
| dnaB protein network | https://string-db.org/network/309801.trd_0692 | Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. |
| rplI protein network | https://string-db.org/network/309801.trd_0693 | Ribosomal protein L9; Binds to the 23S rRNA. |
| trd_0694 protein network | https://string-db.org/network/309801.trd_0694 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0695 protein network | https://string-db.org/network/309801.trd_0695 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0696 protein network | https://string-db.org/network/309801.trd_0696 | RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...] |
| cysS protein network | https://string-db.org/network/309801.trd_0697 | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA syn [...] |
| trd_0698 protein network | https://string-db.org/network/309801.trd_0698 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0699 protein network | https://string-db.org/network/309801.trd_0699 | Putative regulatory protein, FmdB family; Identified by match to protein family HMM TIGR02605. |
| polA protein network | https://string-db.org/network/309801.trd_0700 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. |
| trd_0701 protein network | https://string-db.org/network/309801.trd_0701 | ATPase domain protein; Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. |
| trd_0702 protein network | https://string-db.org/network/309801.trd_0702 | Protein of unknown function family; Identified by match to protein family HMM PF01882. |
| trd_0703 protein network | https://string-db.org/network/309801.trd_0703 | Transglutaminase-like superfamily protein; Identified by match to protein family HMM PF01841. |
| rbsK protein network | https://string-db.org/network/309801.trd_0704 | Probable ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotid [...] |
| hppA protein network | https://string-db.org/network/309801.trd_0705 | V-type H(+)-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive [...] |
| trd_0706 protein network | https://string-db.org/network/309801.trd_0706 | Conserved hypothetical protein. |
| trd_0707 protein network | https://string-db.org/network/309801.trd_0707 | CoxC. |
| trd_0708 protein network | https://string-db.org/network/309801.trd_0708 | Quinol oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme c [...] |
| trd_0709 protein network | https://string-db.org/network/309801.trd_0709 | Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear cent [...] |
| trd_0710 protein network | https://string-db.org/network/309801.trd_0710 | Hypothetical protein; Identified by glimmer; putative. |
| acsA protein network | https://string-db.org/network/309801.trd_0711 | acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. [...] |
| trd_0712 protein network | https://string-db.org/network/309801.trd_0712 | acetyl-CoA acetyltransferase; Identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; Belongs to the thiolase-like superfami [...] |
| recF protein network | https://string-db.org/network/309801.trd_0713 | DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-strand [...] |
| dnaN protein network | https://string-db.org/network/309801.trd_0714 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...] |
| trd_0715 protein network | https://string-db.org/network/309801.trd_0715 | Hypothetical protein; Identified by glimmer; putative. |
| queA protein network | https://string-db.org/network/309801.trd_0716 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ [...] |
| trd_0717 protein network | https://string-db.org/network/309801.trd_0717 | Probable cysteine desulfurase; Identified by match to protein family HMM PF00266. |
| ruvB protein network | https://string-db.org/network/309801.trd_0718 | Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...] |
| trd_0719 protein network | https://string-db.org/network/309801.trd_0719 | Conserved domain protein; Identified by match to protein family HMM PF03966; Belongs to the UPF0434 family. |
| trd_0720 protein network | https://string-db.org/network/309801.trd_0720 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0723 protein network | https://string-db.org/network/309801.trd_0723 | Putative glutathione-regulated potassium-efflux system protein KefB; Identified by match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent cation:proto [...] |
| trd_0724 protein network | https://string-db.org/network/309801.trd_0724 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0725 protein network | https://string-db.org/network/309801.trd_0725 | Hypothetical protein; Identified by glimmer; putative. |
| alaS protein network | https://string-db.org/network/309801.trd_0726 | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...] |
| trd_0727 protein network | https://string-db.org/network/309801.trd_0727 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0728 protein network | https://string-db.org/network/309801.trd_0728 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0729 protein network | https://string-db.org/network/309801.trd_0729 | Conserved hypothetical protein TIGR00250; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. |
| trd_0731 protein network | https://string-db.org/network/309801.trd_0731 | Protein of unknown function (DUF970) superfamily; Identified by match to protein family HMM PF06153. |
| trd_0732 protein network | https://string-db.org/network/309801.trd_0732 | Hypothetical protein; Identified by glimmer; putative. |
| folD protein network | https://string-db.org/network/309801.trd_0733 | 5,10-methylene-tetrahydrofolate dehydrogenase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate [...] |
| trd_0734 protein network | https://string-db.org/network/309801.trd_0734 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0735 protein network | https://string-db.org/network/309801.trd_0735 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0736 protein network | https://string-db.org/network/309801.trd_0736 | Helix-turn-helix domain protein; Identified by match to protein family HMM PF01381. |
| trd_0738 protein network | https://string-db.org/network/309801.trd_0738 | DNA polymerase III alpha subunit; Identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR0059 [...] |
| trd_0739 protein network | https://string-db.org/network/309801.trd_0739 | Putative cyanophycin synthetase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may [...] |
| trd_0740 protein network | https://string-db.org/network/309801.trd_0740 | Cyanophycin synthetase. |
| rdgB protein network | https://string-db.org/network/309801.trd_0741 | Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference fo [...] |
| trd_0742 protein network | https://string-db.org/network/309801.trd_0742 | TatD-related deoxyribonuclease; Identified by match to protein family HMM PF01026; match to protein family HMM PF04909; match to protein family HMM TIGR00010. |
| glmS protein network | https://string-db.org/network/309801.trd_0743 | Glucosamine--fructose-6-phosphate aminotransferase, isomerizing; Identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135. |
| trd_0744 protein network | https://string-db.org/network/309801.trd_0744 | Hypothetical protein; Identified by glimmer; putative. |
| purB protein network | https://string-db.org/network/309801.trd_0745 | Adenylosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. |
| purC protein network | https://string-db.org/network/309801.trd_0746 | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR synthetase family. |
| purS protein network | https://string-db.org/network/309801.trd_0747 | Phosphoribosylformylglycinamidine synthase, purS protein; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent [...] |
| purQ protein network | https://string-db.org/network/309801.trd_0748 | Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion o [...] |
| purL protein network | https://string-db.org/network/309801.trd_0749 | Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion [...] |
| purF protein network | https://string-db.org/network/309801.trd_0750 | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. |
| gcvT protein network | https://string-db.org/network/309801.trd_0751 | Glycine cleavage system T protein; The glycine cleavage system catalyzes the degradation of glycine. |
| gcvH protein network | https://string-db.org/network/309801.trd_0752 | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. |
| gcvPA protein network | https://string-db.org/network/309801.trd_0753 | Glycine cleavage system P-protein; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; [...] |
| engA protein network | https://string-db.org/network/309801.trd_0754 | Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA [...] |
| glyA protein network | https://string-db.org/network/309801.trd_0755 | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...] |
| trd_0756 protein network | https://string-db.org/network/309801.trd_0756 | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Identified by match to protein family HMM PF00953. |
| ubiB protein network | https://string-db.org/network/309801.trd_0757 | 2-polyprenylphenol 6-hydroxylase; Identified by match to protein family HMM PF03109. |
| trd_0758 protein network | https://string-db.org/network/309801.trd_0758 | Identified by match to protein family HMM TIGR02605. |
| htpX protein network | https://string-db.org/network/309801.trd_0760 | Protease htpx; Identified by match to protein family HMM PF01435; Belongs to the peptidase M48B family. |
| trd_0761 protein network | https://string-db.org/network/309801.trd_0761 | Conserved hypothetical protein. |
| trd_0762 protein network | https://string-db.org/network/309801.trd_0762 | Conserved hypothetical protein. |
| trd_0763 protein network | https://string-db.org/network/309801.trd_0763 | Transcription regulator; Identified by match to protein family HMM PF04012. |
| trd_0764 protein network | https://string-db.org/network/309801.trd_0764 | Protein of unknown function superfamily; Identified by match to protein family HMM PF01972. |
| trd_0767 protein network | https://string-db.org/network/309801.trd_0767 | Alcohol dehydrogenase class III; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. |
| tyrS protein network | https://string-db.org/network/309801.trd_0768 | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...] |
| ribF protein network | https://string-db.org/network/309801.trd_0769 | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family. |
| truB protein network | https://string-db.org/network/309801.trd_0770 | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. |
| trd_0771 protein network | https://string-db.org/network/309801.trd_0771 | Identified by match to protein family HMM PF01368; match to protein family HMM PF02272. |
| rbfA protein network | https://string-db.org/network/309801.trd_0772 | Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...] |
| infB protein network | https://string-db.org/network/309801.trd_0773 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...] |
| trd_0774 protein network | https://string-db.org/network/309801.trd_0774 | Protein of unknown function (DUF448) family; Identified by match to protein family HMM PF04296. |
| nusA protein network | https://string-db.org/network/309801.trd_0775 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. |
| trd_0776 protein network | https://string-db.org/network/309801.trd_0776 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0777 protein network | https://string-db.org/network/309801.trd_0777 | Putative conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. |
| gap protein network | https://string-db.org/network/309801.trd_0778 | Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; Belongs to the gly [...] |
| pgk protein network | https://string-db.org/network/309801.trd_0779 | Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family. |
| tpiA protein network | https://string-db.org/network/309801.trd_0780 | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the [...] |
| secG protein network | https://string-db.org/network/309801.trd_0781 | Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. |
| trd_0782 protein network | https://string-db.org/network/309801.trd_0782 | Putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter; Identified by match to protein family HMM PF00496. |
| tatA protein network | https://string-db.org/network/309801.trd_0783 | mttA/Hcf106 family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across memb [...] |
| trd_0784 protein network | https://string-db.org/network/309801.trd_0784 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0785 protein network | https://string-db.org/network/309801.trd_0785 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0786 protein network | https://string-db.org/network/309801.trd_0786 | Map3k10 protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merge [...] |
| trd_0787 protein network | https://string-db.org/network/309801.trd_0787 | Hypothetical protein; Identified by glimmer; putative. |
| lepB protein network | https://string-db.org/network/309801.trd_0788 | Signal peptidase I; Identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family. |
| trd_0789 protein network | https://string-db.org/network/309801.trd_0789 | Uncharacterized ACR; COG1259 superfamily; identified by match to protein family HMM PF02577. |
| trd_0790 protein network | https://string-db.org/network/309801.trd_0790 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0791 protein network | https://string-db.org/network/309801.trd_0791 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0792 protein network | https://string-db.org/network/309801.trd_0792 | Putative NAD-reducing hydrogenase; Identified by match to protein family HMM PF01257. |
| trd_0793 protein network | https://string-db.org/network/309801.trd_0793 | NAD-dependent formate dehydrogenase beta subunit; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curren [...] |
| trd_0794 protein network | https://string-db.org/network/309801.trd_0794 | Putative ornithine cyclodeaminase; Identified by match to protein family HMM PF01488; match to protein family HMM PF02423. |
| trd_0796 protein network | https://string-db.org/network/309801.trd_0796 | Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. |
| trd_0797 protein network | https://string-db.org/network/309801.trd_0797 | 3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. |
| trd_0798 protein network | https://string-db.org/network/309801.trd_0798 | Hypothetical protein; Identified by glimmer; putative. |
| sigA protein network | https://string-db.org/network/309801.trd_0799 | Sigma factor MysA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma fa [...] |
| trd_0800 protein network | https://string-db.org/network/309801.trd_0800 | Hypothetical protein; Identified by glimmer; putative. |
| ruvC protein network | https://string-db.org/network/309801.trd_0801 | Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...] |
| trd_0802 protein network | https://string-db.org/network/309801.trd_0802 | Identified by match to protein family HMM PF01728; match to protein family HMM TIGR00478. |
| trd_0803 protein network | https://string-db.org/network/309801.trd_0803 | ArgK protein; Identified by match to protein family HMM PF03308. |
| trd_0804 protein network | https://string-db.org/network/309801.trd_0804 | Sbm protein; Identified by match to protein family HMM PF02310; match to protein family HMM TIGR00640. |
| trd_0805 protein network | https://string-db.org/network/309801.trd_0805 | Putative ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. |
| trd_0806 protein network | https://string-db.org/network/309801.trd_0806 | Hypothetical protein; Identified by glimmer; putative. |
| pth protein network | https://string-db.org/network/309801.trd_0807 | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. |
| trd_0808 protein network | https://string-db.org/network/309801.trd_0808 | Putative glycosyltransferase; Identified by match to protein family HMM PF00534. |
| tatA-2 protein network | https://string-db.org/network/309801.trd_0809 | Putative twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine [...] |
| trd_0810 protein network | https://string-db.org/network/309801.trd_0810 | Putative ubiE/COQ5 methyltransferase family protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| tgt protein network | https://string-db.org/network/309801.trd_0811 | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...] |
| trd_0812 protein network | https://string-db.org/network/309801.trd_0812 | Acylphosphatase; Identified by match to protein family HMM PF00708. |
| trd_0813 protein network | https://string-db.org/network/309801.trd_0813 | UDP-glucose 6-dehydrogenase; Identified by match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF03720; matc [...] |
| acpS protein network | https://string-db.org/network/309801.trd_0814 | Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. |
| nnrE protein network | https://string-db.org/network/309801.trd_0815 | Protein of unknown function:YjeF-related protein, N-terminal; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX [...] |
| trd_0816 protein network | https://string-db.org/network/309801.trd_0816 | IMP dehydrogenase; Identified by match to protein family HMM PF00571. |
| trd_0817 protein network | https://string-db.org/network/309801.trd_0817 | DNA binding domain, excisionase family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764. |
| trd_0818 protein network | https://string-db.org/network/309801.trd_0818 | Metallo-beta-lactamase superfamily protein; Identified by match to protein family HMM PF00753. |
| trd_0819 protein network | https://string-db.org/network/309801.trd_0819 | Conserved hypothetical protein TIGR00044; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. |
| trd_0820 protein network | https://string-db.org/network/309801.trd_0820 | Conserved hypothetical protein TIGR00726; Identified by match to protein family HMM PF02578; match to protein family HMM TIGR00726; Belongs to the multicopper oxidase YfiH/RL5 family. |
| trd_0821 protein network | https://string-db.org/network/309801.trd_0821 | Putative acetolactate synthase large subunit; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzym [...] |
| trd_0822 protein network | https://string-db.org/network/309801.trd_0822 | Hypothetical protein; Identified by glimmer; putative. |
| nfi protein network | https://string-db.org/network/309801.trd_0823 | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the int [...] |
| fmt protein network | https://string-db.org/network/309801.trd_0824 | methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...] |
| trd_0825 protein network | https://string-db.org/network/309801.trd_0825 | Putative membrane protein. |
| trd_0826 protein network | https://string-db.org/network/309801.trd_0826 | Putative membrane protein. |
| infC protein network | https://string-db.org/network/309801.trd_0827 | Translation initiation factor IF-3; Identified by match to protein family HMM PF00707; Belongs to the IF-3 family. |
| rpmI protein network | https://string-db.org/network/309801.trd_0828 | Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family. |
| rplT protein network | https://string-db.org/network/309801.trd_0829 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...] |
| trd_0830 protein network | https://string-db.org/network/309801.trd_0830 | Possible 23S rRNA methyltransferase tsnR; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; Belongs to the class IV-like SAM-binding methyltransferase superf [...] |
| trd_0831 protein network | https://string-db.org/network/309801.trd_0831 | DNA-binding protein HU 1; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. |
| gyrB protein network | https://string-db.org/network/309801.trd_0832 | DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...] |
| trd_0833 protein network | https://string-db.org/network/309801.trd_0833 | Putative membrane protein. |
| trd_0834 protein network | https://string-db.org/network/309801.trd_0834 | Domain of unknown function (DUF1025) superfamily; Identified by match to protein family HMM PF06262. |
| trd_0835 protein network | https://string-db.org/network/309801.trd_0835 | PbpA; Identified by match to protein family HMM PF00905. |
| trd_0836 protein network | https://string-db.org/network/309801.trd_0836 | Cell division membrane protein; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. |
| mtaP protein network | https://string-db.org/network/309801.trd_0837 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a [...] |
| trd_0838 protein network | https://string-db.org/network/309801.trd_0838 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0839 protein network | https://string-db.org/network/309801.trd_0839 | O-Antigen Polymerase family; Identified by match to protein family HMM PF04932. |
| trd_0840 protein network | https://string-db.org/network/309801.trd_0840 | UDP-glucuronate decarboxylase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993. |
| trd_0841 protein network | https://string-db.org/network/309801.trd_0841 | O-Antigen Polymerase family; Identified by match to protein family HMM PF04932. |
| trd_0842 protein network | https://string-db.org/network/309801.trd_0842 | Putative membrane protein; Identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374. |
| trd_0843 protein network | https://string-db.org/network/309801.trd_0843 | AprM; Identified by match to protein family HMM PF00534. |
| trd_0844 protein network | https://string-db.org/network/309801.trd_0844 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0845 protein network | https://string-db.org/network/309801.trd_0845 | Polysaccharide biosynthesis protein; Identified by match to protein family HMM PF01943. |
| trd_0846 protein network | https://string-db.org/network/309801.trd_0846 | Putative lipoprotein; Identified by match to protein family HMM PF01551. |
| trd_0847 protein network | https://string-db.org/network/309801.trd_0847 | DNA polymerase III, delta subunit superfamily; Identified by match to protein family HMM PF06144. |
| rpsT protein network | https://string-db.org/network/309801.trd_0848 | 30S ribosomal protein-like protein; Binds directly to 16S ribosomal RNA. |
| trd_0849 protein network | https://string-db.org/network/309801.trd_0849 | Hypothetical protein; Identified by glimmer; putative. |
| mviN protein network | https://string-db.org/network/309801.trd_0850 | Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. |
| lepA protein network | https://string-db.org/network/309801.trd_0851 | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...] |
| trd_0852 protein network | https://string-db.org/network/309801.trd_0852 | Putative tetrapyrrole (corrin/porphyrin) methylases; Identified by match to protein family HMM PF00590; match to protein family HMM PF03819; match to protein family HMM TIGR00444. |
| aspS protein network | https://string-db.org/network/309801.trd_0853 | aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...] |
| trd_0854 protein network | https://string-db.org/network/309801.trd_0854 | Probable manganese catalase; Identified by match to protein family HMM PF05067. |
| trd_0859 protein network | https://string-db.org/network/309801.trd_0859 | Putative IolC myo-catabolism protein. |
| hflX protein network | https://string-db.org/network/309801.trd_0861 | Putative GTPase of unknown function subfamily; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC cla [...] |
| trd_0862 protein network | https://string-db.org/network/309801.trd_0862 | Roadblock/LC7 domain superfamily; Identified by match to protein family HMM PF03259. |
| purM protein network | https://string-db.org/network/309801.trd_0863 | Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878. |
| trd_0864 protein network | https://string-db.org/network/309801.trd_0864 | GTP-binding domain protein. |
| trd_0865 protein network | https://string-db.org/network/309801.trd_0865 | Putative exopolyphosphatase. |
| trd_0866 protein network | https://string-db.org/network/309801.trd_0866 | Conserved hypothetical protein. |
| purH protein network | https://string-db.org/network/309801.trd_0867 | Bifunctional purine biosynthesis protein PurH; Identified by match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355. |
| trd_0868 protein network | https://string-db.org/network/309801.trd_0868 | Conserved hypothetical protein. |
| trd_0869 protein network | https://string-db.org/network/309801.trd_0869 | Conserved hypothetical protein. |
| trd_0870 protein network | https://string-db.org/network/309801.trd_0870 | G5 domain family. |
| trd_0871 protein network | https://string-db.org/network/309801.trd_0871 | Putative endoribonuclease L-PSP; Identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004. |
| greA protein network | https://string-db.org/network/309801.trd_0873 | Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...] |
| lysS protein network | https://string-db.org/network/309801.trd_0874 | lysyl-tRNA synthetase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; Belongs to the class-II aminoacyl-tRNA synthe [...] |
| trd_0875 protein network | https://string-db.org/network/309801.trd_0875 | Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| trd_0876 protein network | https://string-db.org/network/309801.trd_0876 | Binding-protein-dependent transport systems inner membrane component; Identified by match to protein family HMM PF00528. |
| trd_0878 protein network | https://string-db.org/network/309801.trd_0878 | Polyamine ABC trasnporter, periplasmic polyamine-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. |
| trd_0879 protein network | https://string-db.org/network/309801.trd_0879 | Peptidase family M20/M25/M40. |
| trd_0880 protein network | https://string-db.org/network/309801.trd_0880 | Putative dehydrogenase protein; Identified by match to protein family HMM PF01266. |
| fbpC protein network | https://string-db.org/network/309801.trd_0881 | ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. |
| accA-2 protein network | https://string-db.org/network/309801.trd_0882 | Putative carboxyltransferase subunit of acetyl-CoA carboxylase; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on it [...] |
| trd_0883 protein network | https://string-db.org/network/309801.trd_0883 | Hypothetical protein; Identified by glimmer; putative. |
| otsB protein network | https://string-db.org/network/309801.trd_0884 | Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. |
| trd_0885 protein network | https://string-db.org/network/309801.trd_0885 | Conserved hypothetical protein. |
| trd_0886 protein network | https://string-db.org/network/309801.trd_0886 | Transporter, major facilitator family; Identified by match to protein family HMM PF07690. |
| trd_0887 protein network | https://string-db.org/network/309801.trd_0887 | Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. |
| trd_0888 protein network | https://string-db.org/network/309801.trd_0888 | CBS domain protein/ACT domain protein; Identified by match to protein family HMM PF00571. |
| trd_0889 protein network | https://string-db.org/network/309801.trd_0889 | Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. |
| trd_0890 protein network | https://string-db.org/network/309801.trd_0890 | Protein of unknown function (DUF503) superfamily; Identified by match to protein family HMM PF04456. |
| trd_0891 protein network | https://string-db.org/network/309801.trd_0891 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0892 protein network | https://string-db.org/network/309801.trd_0892 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0893 protein network | https://string-db.org/network/309801.trd_0893 | DnaJ domain protein; Identified by match to protein family HMM PF00226. |
| trd_0894 protein network | https://string-db.org/network/309801.trd_0894 | Acetolactate synthase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family. |
| trd_0895 protein network | https://string-db.org/network/309801.trd_0895 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0898 protein network | https://string-db.org/network/309801.trd_0898 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0899 protein network | https://string-db.org/network/309801.trd_0899 | Putative 5,10-methylenetetrahydrofolate reductase; Identified by match to protein family HMM PF02219; Belongs to the methylenetetrahydrofolate reductase family. |
| fhs protein network | https://string-db.org/network/309801.trd_0900 | Formate--tetrahydrofolate ligase; Identified by match to protein family HMM PF01268; Belongs to the formate--tetrahydrofolate ligase family. |
| trd_0901 protein network | https://string-db.org/network/309801.trd_0901 | Putative aminomethyltransferase; Belongs to the GcvT family. |
| trd_0902 protein network | https://string-db.org/network/309801.trd_0902 | Putative ABC transporter substrate-binding protein; Identified by match to protein family HMM PF09084. |
| trd_0903 protein network | https://string-db.org/network/309801.trd_0903 | Conserved hypothetical protein. |
| trd_0904 protein network | https://string-db.org/network/309801.trd_0904 | Identified by match to protein family HMM PF02585. |
| trd_0905 protein network | https://string-db.org/network/309801.trd_0905 | Demethylmenaquinone methyltransferase; Identified by match to protein family HMM PF03737. |
| trd_0906 protein network | https://string-db.org/network/309801.trd_0906 | Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211. |
| trd_0907 protein network | https://string-db.org/network/309801.trd_0907 | Polyglutamate synthase CapA. |
| trd_0909 protein network | https://string-db.org/network/309801.trd_0909 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0910 protein network | https://string-db.org/network/309801.trd_0910 | Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106. |
| trd_0911 protein network | https://string-db.org/network/309801.trd_0911 | Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be me [...] |
| trd_0912 protein network | https://string-db.org/network/309801.trd_0912 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. |
| trd_0913 protein network | https://string-db.org/network/309801.trd_0913 | Conserved hypothetical protein; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655. |
| trd_0916 protein network | https://string-db.org/network/309801.trd_0916 | GDP-6-deoxy-D-lyxo-4-hexulose reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM P [...] |
| metK protein network | https://string-db.org/network/309801.trd_0917 | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet forma [...] |
| ahcY protein network | https://string-db.org/network/309801.trd_0918 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. |
| mtnA protein network | https://string-db.org/network/309801.trd_0919 | Initiation factor 2b family protein; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). |
| aroK protein network | https://string-db.org/network/309801.trd_0920 | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquin [...] |
| mdh protein network | https://string-db.org/network/309801.trd_0921 | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. |
| trd_0922 protein network | https://string-db.org/network/309801.trd_0922 | Integral membrane protein DUF6; Identified by match to protein family HMM PF00892. |
| trd_0923 protein network | https://string-db.org/network/309801.trd_0923 | Probable molybdopterin biosynthesis moea protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. |
| trd_0924 protein network | https://string-db.org/network/309801.trd_0924 | Putative ROK-family transcriptional regulator; Identified by match to protein family HMM PF00480. |
| trd_0925 protein network | https://string-db.org/network/309801.trd_0925 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0926 protein network | https://string-db.org/network/309801.trd_0926 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0927 protein network | https://string-db.org/network/309801.trd_0927 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0928 protein network | https://string-db.org/network/309801.trd_0928 | Phycocyanin alpha phycocyanobilin lyase related protein; Identified by match to protein family HMM PF02985; match to protein family HMM PF03130. |
| trd_0929 protein network | https://string-db.org/network/309801.trd_0929 | Identified by match to protein family HMM PF02388. |
| murE protein network | https://string-db.org/network/309801.trd_0930 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the bi [...] |
| trd_0931 protein network | https://string-db.org/network/309801.trd_0931 | Acylaminoacyl-peptidase; Identified by match to protein family HMM PF07676. |
| trd_0932 protein network | https://string-db.org/network/309801.trd_0932 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0935 protein network | https://string-db.org/network/309801.trd_0935 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0936 protein network | https://string-db.org/network/309801.trd_0936 | Putative glutathione-dependent formaldehyde dehydrogenase. |
| trd_0937 protein network | https://string-db.org/network/309801.trd_0937 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0940 protein network | https://string-db.org/network/309801.trd_0940 | Putative serine/threonine protein phosphatase; Identified by match to protein family HMM PF00149. |
| rsfS protein network | https://string-db.org/network/309801.trd_0942 | Domain of unknown function DUF143 superfamily; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents assoc [...] |
| trd_0943 protein network | https://string-db.org/network/309801.trd_0943 | Conserved hypothetical protein. |
| trd_0944 protein network | https://string-db.org/network/309801.trd_0944 | Putative trehalose phosphorylase; Identified by match to protein family HMM PF00534. |
| pncB protein network | https://string-db.org/network/309801.trd_0945 | Putative nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicot [...] |
| trd_0946 protein network | https://string-db.org/network/309801.trd_0946 | Putative RNA polymerase sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937. |
| trd_0947 protein network | https://string-db.org/network/309801.trd_0947 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0948 protein network | https://string-db.org/network/309801.trd_0948 | Heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. |
| trd_0949 protein network | https://string-db.org/network/309801.trd_0949 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precur [...] |
| trd_0950 protein network | https://string-db.org/network/309801.trd_0950 | Conserved hypothetical protein. |
| trd_0951 protein network | https://string-db.org/network/309801.trd_0951 | Peptidase family T4; Identified by match to protein family HMM PF03576. |
| trd_0952 protein network | https://string-db.org/network/309801.trd_0952 | Putative conserved protein; Identified by match to protein family HMM PF01261. |
| rpsI protein network | https://string-db.org/network/309801.trd_0953 | Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family. |
| rplM protein network | https://string-db.org/network/309801.trd_0954 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...] |
| truA protein network | https://string-db.org/network/309801.trd_0955 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. |
| rplQ protein network | https://string-db.org/network/309801.trd_0956 | Ribosomal protein L17; Identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059. |
| rpoA protein network | https://string-db.org/network/309801.trd_0957 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpsD protein network | https://string-db.org/network/309801.trd_0958 | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. |
| rpsK protein network | https://string-db.org/network/309801.trd_0959 | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs t [...] |
| rpsM protein network | https://string-db.org/network/309801.trd_0960 | Ribosomal protein S13p/S18e; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein [...] |
| rpmJ protein network | https://string-db.org/network/309801.trd_0961 | Ribosomal protein L36; Identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. |
| infA protein network | https://string-db.org/network/309801.trd_0962 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...] |
| map protein network | https://string-db.org/network/309801.trd_0963 | Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...] |
| adk protein network | https://string-db.org/network/309801.trd_0964 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...] |
| secY protein network | https://string-db.org/network/309801.trd_0965 | Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...] |
| rplO protein network | https://string-db.org/network/309801.trd_0966 | Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. |
| rpmD protein network | https://string-db.org/network/309801.trd_0967 | Ribosomal protein L30; Identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308. |
| rpsE protein network | https://string-db.org/network/309801.trd_0968 | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. |
| rplR protein network | https://string-db.org/network/309801.trd_0969 | Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. |
| rplF protein network | https://string-db.org/network/309801.trd_0970 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the t [...] |
| rpsH protein network | https://string-db.org/network/309801.trd_0971 | Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...] |
| rplE protein network | https://string-db.org/network/309801.trd_0972 | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance [...] |
| rplX protein network | https://string-db.org/network/309801.trd_0973 | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. |
| rplN protein network | https://string-db.org/network/309801.trd_0974 | Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. |
| rpsQ protein network | https://string-db.org/network/309801.trd_0975 | 30S ribosomal subunit protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. |
| rpmC protein network | https://string-db.org/network/309801.trd_0976 | 50S ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family. |
| rplP protein network | https://string-db.org/network/309801.trd_0977 | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. |
| rpsC protein network | https://string-db.org/network/309801.trd_0978 | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. |
| rplV protein network | https://string-db.org/network/309801.trd_0979 | Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S as [...] |
| rpsS protein network | https://string-db.org/network/309801.trd_0980 | Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. |
| rplB protein network | https://string-db.org/network/309801.trd_0981 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...] |
| rplW protein network | https://string-db.org/network/309801.trd_0982 | Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...] |
| rplD protein network | https://string-db.org/network/309801.trd_0983 | Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel. |
| rplC protein network | https://string-db.org/network/309801.trd_0984 | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosom [...] |
| rpsJ protein network | https://string-db.org/network/309801.trd_0985 | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. |
| tuf-2 protein network | https://string-db.org/network/309801.trd_0986 | Translation elongation factor Tu; Identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR0023 [...] |
| fusA protein network | https://string-db.org/network/309801.trd_0987 | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...] |
| rpsG protein network | https://string-db.org/network/309801.trd_0988 | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...] |
| rpsL protein network | https://string-db.org/network/309801.trd_0989 | Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. |
| rpoC protein network | https://string-db.org/network/309801.trd_0990 | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| rpoB protein network | https://string-db.org/network/309801.trd_0991 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
| trd_0992 protein network | https://string-db.org/network/309801.trd_0992 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0994 protein network | https://string-db.org/network/309801.trd_0994 | Hypothetical protein; Identified by glimmer; putative. |
| trd_0995 protein network | https://string-db.org/network/309801.trd_0995 | Protein of unknown function, DUF583 family; Identified by match to protein family HMM PF04519. |
| trd_0996 protein network | https://string-db.org/network/309801.trd_0996 | Protein of unknown function; Identified by match to protein family HMM PF04519. |
| trd_0997 protein network | https://string-db.org/network/309801.trd_0997 | Hypothetical protein; Identified by glimmer; putative. |
| rpsB protein network | https://string-db.org/network/309801.trd_0998 | Ribosomal protein S2; Identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. |
| tsf protein network | https://string-db.org/network/309801.trd_0999 | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...] |
| pyrH protein network | https://string-db.org/network/309801.trd_1000 | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. |
| frr protein network | https://string-db.org/network/309801.trd_1001 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosome [...] |
| uppS protein network | https://string-db.org/network/309801.trd_1002 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. |
| cdsA protein network | https://string-db.org/network/309801.trd_1003 | Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148; Belongs to the CDS family. |
| trd_1004 protein network | https://string-db.org/network/309801.trd_1004 | Conserved hypothetical protein. |
| dxr protein network | https://string-db.org/network/309801.trd_1005 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...] |
| trd_1007 protein network | https://string-db.org/network/309801.trd_1007 | Uncharacterized ACR; COG1430; identified by match to protein family HMM PF02643. |
| trd_1008 protein network | https://string-db.org/network/309801.trd_1008 | Copper resistance protein CopC; Identified by match to protein family HMM PF04234; match to protein family HMM PF05425. |
| trd_1009 protein network | https://string-db.org/network/309801.trd_1009 | Type II secretion system protein; Identified by match to protein family HMM PF00482. |
| trd_1010 protein network | https://string-db.org/network/309801.trd_1010 | Bacterial type II secretion system protein F domain; Identified by match to protein family HMM PF00482. |
| trd_1011 protein network | https://string-db.org/network/309801.trd_1011 | CpaF; Identified by match to protein family HMM PF00437. |
| trd_1012 protein network | https://string-db.org/network/309801.trd_1012 | Putative two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF01656. |
| trd_1013 protein network | https://string-db.org/network/309801.trd_1013 | Putative membrane fimbriae assembly protein; Identified by match to protein family HMM PF08666; match to protein family HMM TIGR03177. |
| trd_1014 protein network | https://string-db.org/network/309801.trd_1014 | Family of unknown function (DUF470) family; Identified by match to protein family HMM PF04329; match to protein family HMM PF04330; match to protein family HMM PF04331; match to protein family HM [...] |
| trd_1021 protein network | https://string-db.org/network/309801.trd_1021 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1022 protein network | https://string-db.org/network/309801.trd_1022 | Probable glutamine amidotransferase; Identified by match to protein family HMM PF00117; match to protein family HMM PF07722. |
| lon protein network | https://string-db.org/network/309801.trd_1023 | ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...] |
| trd_1024 protein network | https://string-db.org/network/309801.trd_1024 | Putative heat shock protein, Hsp20 family; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. |
| trd_1025 protein network | https://string-db.org/network/309801.trd_1025 | UbiA prenyltransferase:PepSY-associated TM helix; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. |
| trd_1026 protein network | https://string-db.org/network/309801.trd_1026 | Conserved hypothetical protein. |
| trd_1027 protein network | https://string-db.org/network/309801.trd_1027 | Heptaprenyl diphosphate synthase component II; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. |
| trd_1028 protein network | https://string-db.org/network/309801.trd_1028 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1029 protein network | https://string-db.org/network/309801.trd_1029 | Inosine-uridine preferring nucleoside hydrolase; Identified by match to protein family HMM PF01156. |
| trd_1030 protein network | https://string-db.org/network/309801.trd_1030 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1031 protein network | https://string-db.org/network/309801.trd_1031 | Putative hydroxypyruvate reductase; Identified by match to protein family HMM PF05161. |
| trd_1032 protein network | https://string-db.org/network/309801.trd_1032 | Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. |
| lspA protein network | https://string-db.org/network/309801.trd_1033 | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. |
| radA protein network | https://string-db.org/network/309801.trd_1034 | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand [...] |
| trd_1035 protein network | https://string-db.org/network/309801.trd_1035 | ClpC ATPase; Identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein fam [...] |
| trd_1036 protein network | https://string-db.org/network/309801.trd_1036 | 30S ribosomal protein S1; Identified by match to protein family HMM PF00575. |
| trd_1037 protein network | https://string-db.org/network/309801.trd_1037 | Soluble hydrogenase 42 kDa subunit; Identified by match to protein family HMM PF00266. |
| trd_1038 protein network | https://string-db.org/network/309801.trd_1038 | O-Antigen Polymerase family; Identified by match to protein family HMM PF04932. |
| trd_1039 protein network | https://string-db.org/network/309801.trd_1039 | Putative transcriptional regulator superfamily; Identified by match to protein family HMM PF01638. |
| trd_1040 protein network | https://string-db.org/network/309801.trd_1040 | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015. |
| moaA protein network | https://string-db.org/network/309801.trd_1041 | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. |
| trd_1042 protein network | https://string-db.org/network/309801.trd_1042 | GlcNAc-PI de-N-acetylase family; Identified by match to protein family HMM PF02585. |
| hisS protein network | https://string-db.org/network/309801.trd_1043 | histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442. |
| trd_1044 protein network | https://string-db.org/network/309801.trd_1044 | Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. |
| trd_1045 protein network | https://string-db.org/network/309801.trd_1045 | Deacetylase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. |
| trd_1046 protein network | https://string-db.org/network/309801.trd_1046 | Conserved hypothetical protein TIGR00252; Identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; Belongs to the UPF0102 family. |
| rnhB protein network | https://string-db.org/network/309801.trd_1047 | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. |
| rplS protein network | https://string-db.org/network/309801.trd_1048 | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. |
| trd_1049 protein network | https://string-db.org/network/309801.trd_1049 | 5-methyltetrahydrofolate S-homocysteine methyltransferase; Identified by match to protein family HMM PF02219; match to protein family HMM PF02574. |
| trd_1050 protein network | https://string-db.org/network/309801.trd_1050 | Group3 RNA polymerase sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02 [...] |
| trd_1051 protein network | https://string-db.org/network/309801.trd_1051 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1052 protein network | https://string-db.org/network/309801.trd_1052 | CAAX amino terminal protease family; Identified by match to protein family HMM PF02517. |
| glyS protein network | https://string-db.org/network/309801.trd_1053 | glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family. |
| trd_1054 protein network | https://string-db.org/network/309801.trd_1054 | Stage 0 sporulation protein J; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. |
| trd_1055 protein network | https://string-db.org/network/309801.trd_1055 | Tyrosine recombinase xerD; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. |
| ald protein network | https://string-db.org/network/309801.trd_1056 | Alanine dehydrogenase; Identified by match to protein family HMM PF01262; match to protein family HMM PF05222; match to protein family HMM TIGR00518. |
| trd_1057 protein network | https://string-db.org/network/309801.trd_1057 | Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054. |
| ispG protein network | https://string-db.org/network/309801.trd_1058 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG fa [...] |
| trd_1059 protein network | https://string-db.org/network/309801.trd_1059 | Kinase, pfkB family; Identified by match to protein family HMM PF00294; Belongs to the carbohydrate kinase PfkB family. |
| ppc protein network | https://string-db.org/network/309801.trd_1060 | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. |
| trd_1061 protein network | https://string-db.org/network/309801.trd_1061 | PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF03130; match to protein family HMM PF08331. |
| coaX protein network | https://string-db.org/network/309801.trd_1062 | Bvg accessory factor; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family. |
| trd_1063 protein network | https://string-db.org/network/309801.trd_1063 | Putative sgc region protein sgcX; Identified by match to protein family HMM PF05343. |
| fusA-2 protein network | https://string-db.org/network/309801.trd_1064 | Translation elongation factor G; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; [...] |
| trd_1065 protein network | https://string-db.org/network/309801.trd_1065 | Ribonuclease HI. |
| thrS protein network | https://string-db.org/network/309801.trd_1067 | threonyl-tRNA synthetase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; Belon [...] |
| trd_1068 protein network | https://string-db.org/network/309801.trd_1068 | Identified by match to protein family HMM PF01244. |
| trd_1069 protein network | https://string-db.org/network/309801.trd_1069 | Putative methyltransferase; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_1070 protein network | https://string-db.org/network/309801.trd_1070 | N-acetylglucosamine-6-phoshatase or p-nitrophenyl phosphatase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460; Belongs to the HAD-like hydrolase superfam [...] |
| trd_1071 protein network | https://string-db.org/network/309801.trd_1071 | Probable peptidic bond hydrolase; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01910. |
| trd_1072 protein network | https://string-db.org/network/309801.trd_1072 | Domain of unknown function protein; Identified by match to protein family HMM PF03737. |
| trd_1073 protein network | https://string-db.org/network/309801.trd_1073 | Putative lipoprotein. |
| trd_1074 protein network | https://string-db.org/network/309801.trd_1074 | ABC-2 type transporter superfamily; Identified by match to protein family HMM PF01061. |
| trd_1075 protein network | https://string-db.org/network/309801.trd_1075 | Multidrug ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| trd_1076 protein network | https://string-db.org/network/309801.trd_1076 | Possible transcriptional regulatory protein; Identified by match to protein family HMM PF01047. |
| trd_1077 protein network | https://string-db.org/network/309801.trd_1077 | Conserved hypothetical protein. |
| moaC protein network | https://string-db.org/network/309801.trd_1078 | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC fami [...] |
| mnmA protein network | https://string-db.org/network/309801.trd_1079 | tRNA methyl transferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. |
| trd_1080 protein network | https://string-db.org/network/309801.trd_1080 | Aminotransferase, class III; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. |
| greA-2 protein network | https://string-db.org/network/309801.trd_1081 | Transcription elongation factor greA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...] |
| trd_1082 protein network | https://string-db.org/network/309801.trd_1082 | Putative YbaK / prolyl-tRNA synthetases associated domain; Identified by match to protein family HMM PF04073. |
| trd_1083 protein network | https://string-db.org/network/309801.trd_1083 | Hypothetical sugar kinase; Identified by match to protein family HMM PF00294. |
| trd_1084 protein network | https://string-db.org/network/309801.trd_1084 | Protein jag; Identified by match to protein family HMM PF01424. |
| trd_1085 protein network | https://string-db.org/network/309801.trd_1085 | Inner membrane protein oxaA; Identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592. |
| trd_1086 protein network | https://string-db.org/network/309801.trd_1086 | Conserved hypothetical protein TIGR00278; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. |
| rnpA protein network | https://string-db.org/network/309801.trd_1087 | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...] |
| rpmH protein network | https://string-db.org/network/309801.trd_1088 | Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family. |
| trd_1089 protein network | https://string-db.org/network/309801.trd_1089 | Beta-lactamase; Identified by match to protein family HMM PF00144. |
| trd_1090 protein network | https://string-db.org/network/309801.trd_1090 | GAF domain protein; Identified by match to protein family HMM PF01590. |
| trd_1091 protein network | https://string-db.org/network/309801.trd_1091 | Response regulator; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966; match to protein family HMM TIGR00277. |
| trd_1092 protein network | https://string-db.org/network/309801.trd_1092 | Putative major facilitator superfamily; Identified by match to protein family HMM PF07690. |
| ileS protein network | https://string-db.org/network/309801.trd_1093 | isoleucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM TIGR00392. |
| trd_1094 protein network | https://string-db.org/network/309801.trd_1094 | Conserved hypothetical protein; Identified by match to protein family HMM PF08242. |
| trd_1095 protein network | https://string-db.org/network/309801.trd_1095 | Identified by match to protein family HMM PF04909. |
| pfp protein network | https://string-db.org/network/309801.trd_1096 | 6-phosphofructokinase isozyme 1; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of AT [...] |
| trd_1097 protein network | https://string-db.org/network/309801.trd_1097 | Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992. |
| murI protein network | https://string-db.org/network/309801.trd_1098 | Aspartate racemase; Identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; Belongs to the aspartate/glutamate racemases family. |
| trd_1099 protein network | https://string-db.org/network/309801.trd_1099 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1100 protein network | https://string-db.org/network/309801.trd_1100 | Putative FesM; Identified by match to protein family HMM PF00037. |
| trd_1101 protein network | https://string-db.org/network/309801.trd_1101 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1102 protein network | https://string-db.org/network/309801.trd_1102 | senC homolog; Identified by match to protein family HMM PF02630. |
| trd_1103 protein network | https://string-db.org/network/309801.trd_1103 | Taurine--pyruvate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. |
| trd_1104 protein network | https://string-db.org/network/309801.trd_1104 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1105 protein network | https://string-db.org/network/309801.trd_1105 | Glutamate synthase [nadph] large chain precursor; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein fam [...] |
| trd_1106 protein network | https://string-db.org/network/309801.trd_1106 | Nitrogen regulatory protein P-II; Identified by match to protein family HMM PF00543; Belongs to the P(II) protein family. |
| amt protein network | https://string-db.org/network/309801.trd_1107 | Ammonium transporter; Identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836. |
| trd_1108 protein network | https://string-db.org/network/309801.trd_1108 | Hypothetical protein; Identified by glimmer; putative. |
| mutS protein network | https://string-db.org/network/309801.trd_1109 | DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...] |
| trd_1110 protein network | https://string-db.org/network/309801.trd_1110 | Putative MFS transporter; Identified by match to protein family HMM PF07690. |
| trd_1111 protein network | https://string-db.org/network/309801.trd_1111 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1112 protein network | https://string-db.org/network/309801.trd_1112 | Conserved hypothetical protein. |
| trd_1113 protein network | https://string-db.org/network/309801.trd_1113 | Putative sodium/solute symporter; Identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. |
| trd_1114 protein network | https://string-db.org/network/309801.trd_1114 | DNA polymerase III epsilon subunit; Identified by match to protein family HMM PF00929; match to protein family HMM TIGR00573. |
| trd_1115 protein network | https://string-db.org/network/309801.trd_1115 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1116 protein network | https://string-db.org/network/309801.trd_1116 | CBS domain protein; Identified by match to protein family HMM PF00027; match to protein family HMM PF00571; match to protein family HMM PF03445. |
| trd_1117 protein network | https://string-db.org/network/309801.trd_1117 | Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501. |
| trd_1118 protein network | https://string-db.org/network/309801.trd_1118 | YwfM; Identified by match to protein family HMM PF00892. |
| trd_1119 protein network | https://string-db.org/network/309801.trd_1119 | Penicillin acylase II; Identified by match to protein family HMM PF01804. |
| trd_1120 protein network | https://string-db.org/network/309801.trd_1120 | Putative membrane protein. |
| trd_1121 protein network | https://string-db.org/network/309801.trd_1121 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535; match to protein family HMM PF05157. |
| hemA protein network | https://string-db.org/network/309801.trd_1122 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). |
| hemL protein network | https://string-db.org/network/309801.trd_1123 | Glutamate-1-semialdehyde-2,1-aminomutase; Identified by match to protein family HMM PF00202; match to protein family HMM TIGR00713. |
| hemB protein network | https://string-db.org/network/309801.trd_1124 | Delta-aminolevulinic acid dehydratase; Identified by match to protein family HMM PF00490; Belongs to the ALAD family. |
| hemD protein network | https://string-db.org/network/309801.trd_1125 | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. |
| trd_1126 protein network | https://string-db.org/network/309801.trd_1126 | Sulfide dehydrogenase; Identified by match to protein family HMM PF07992. |
| folE protein network | https://string-db.org/network/309801.trd_1127 | GTP cyclohydrolase I; Identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063. |
| trd_1128 protein network | https://string-db.org/network/309801.trd_1128 | CDP-alcohol phosphatidyltransferase family; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. |
| trd_1129 protein network | https://string-db.org/network/309801.trd_1129 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. |
| trd_1130 protein network | https://string-db.org/network/309801.trd_1130 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1131 protein network | https://string-db.org/network/309801.trd_1131 | Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; Belongs to the DEAD box helicase family. |
| trd_1132 protein network | https://string-db.org/network/309801.trd_1132 | Conserved hypothetical protein TIGR01033; Identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033. |
| trd_1133 protein network | https://string-db.org/network/309801.trd_1133 | Putative membrane protein. |
| trd_1134 protein network | https://string-db.org/network/309801.trd_1134 | Putative pyridoxal phosphate-dependent enzyme; Identified by match to protein family HMM PF01212; match to protein family HMM PF03841. |
| trd_1135 protein network | https://string-db.org/network/309801.trd_1135 | Sugar ABC transportor, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. |
| trd_1136 protein network | https://string-db.org/network/309801.trd_1136 | Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528. |
| trd_1137 protein network | https://string-db.org/network/309801.trd_1137 | Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528. |
| trd_1138 protein network | https://string-db.org/network/309801.trd_1138 | Putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. |
| trd_1139 protein network | https://string-db.org/network/309801.trd_1139 | Acetyl-coenzyme A synthetase; Identified by match to protein family HMM PF00501. |
| trd_1140 protein network | https://string-db.org/network/309801.trd_1140 | Conserved hypothetical protein TIGR00026; Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. |
| tal protein network | https://string-db.org/network/309801.trd_1141 | Transaldolase and glucose-6-phosphate isomerase bifunctional protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. |
| gnd protein network | https://string-db.org/network/309801.trd_1142 | 6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein f [...] |
| zwf protein network | https://string-db.org/network/309801.trd_1143 | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. |
| trd_1144 protein network | https://string-db.org/network/309801.trd_1144 | Conserved hypothetical protein. |
| trd_1145 protein network | https://string-db.org/network/309801.trd_1145 | Putative permidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein; Identified by match to protein family HMM PF01547. |
| pgl protein network | https://string-db.org/network/309801.trd_1146 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. |
| trd_1147 protein network | https://string-db.org/network/309801.trd_1147 | Protein of unknown function (DUF420) superfamily; Identified by match to protein family HMM PF04238. |
| trd_1148 protein network | https://string-db.org/network/309801.trd_1148 | Phosphonoacetate hydrolase; Identified by match to protein family HMM PF01663. |
| trd_1149 protein network | https://string-db.org/network/309801.trd_1149 | Probable nodulation ATP-binding ABC transporter protein; Identified by match to protein family HMM PF00005. |
| trd_1150 protein network | https://string-db.org/network/309801.trd_1150 | Identified by match to protein family HMM PF01061; similar to B1496_F2_59. |
| trd_1151 protein network | https://string-db.org/network/309801.trd_1151 | Putative conserved hypothetical protein TIGR00104; Identified by match to protein family HMM PF01980; match to protein family HMM TIGR00104. |
| trd_1152 protein network | https://string-db.org/network/309801.trd_1152 | Nitrate reductase (NAD(P)H); Identified by match to protein family HMM PF00174; match to protein family HMM PF03404. |
| trd_1153 protein network | https://string-db.org/network/309801.trd_1153 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1154 protein network | https://string-db.org/network/309801.trd_1154 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1155 protein network | https://string-db.org/network/309801.trd_1155 | Hypothetical protein; Identified by glimmer; putative. |
| rplY protein network | https://string-db.org/network/309801.trd_1156 | Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein b [...] |
| trd_1157 protein network | https://string-db.org/network/309801.trd_1157 | Multidrug-efflux transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. |
| trd_1158 protein network | https://string-db.org/network/309801.trd_1158 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. |
| trd_1159 protein network | https://string-db.org/network/309801.trd_1159 | Phytoene synthetase; Identified by match to protein family HMM PF00494. |
| trd_1160 protein network | https://string-db.org/network/309801.trd_1160 | Conserved hypothetical protein. |
| trd_1161 protein network | https://string-db.org/network/309801.trd_1161 | Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535. |
| trd_1162 protein network | https://string-db.org/network/309801.trd_1162 | Protein of unknown function (DUF422) family; Identified by match to protein family HMM PF04240. |
| trd_1163 protein network | https://string-db.org/network/309801.trd_1163 | Phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR02734. |
| ispH protein network | https://string-db.org/network/309801.trd_1164 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...] |
| trd_1165 protein network | https://string-db.org/network/309801.trd_1165 | Glycolate oxidase subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913. |
| dnaA protein network | https://string-db.org/network/309801.trd_1166 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...] |
| trd_1167 protein network | https://string-db.org/network/309801.trd_1167 | Conserved hypothetical protein. |
| trd_1168 protein network | https://string-db.org/network/309801.trd_1168 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1169 protein network | https://string-db.org/network/309801.trd_1169 | Regulatory protein, MarR; Identified by match to protein family HMM PF01022; match to protein family HMM PF01047; match to protein family HMM PF01978. |
| trd_1170 protein network | https://string-db.org/network/309801.trd_1170 | Putative drug transport protein; Identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; Belongs to the major facilitator superfamily. |
| trd_1171 protein network | https://string-db.org/network/309801.trd_1171 | Identified by match to protein family HMM PF02566. |
| trd_1172 protein network | https://string-db.org/network/309801.trd_1172 | Putative thiosulfate sulfurtransferase precursor; Identified by match to protein family HMM PF00581. |
| trd_1173 protein network | https://string-db.org/network/309801.trd_1173 | Identified by match to protein family HMM PF01592. |
| trd_1174 protein network | https://string-db.org/network/309801.trd_1174 | Identified by match to protein family HMM PF05694. |
| trd_1175 protein network | https://string-db.org/network/309801.trd_1175 | Putative membrane protein. |
| trd_1176 protein network | https://string-db.org/network/309801.trd_1176 | Phosphoesterase PHP, N-terminal; Identified by match to protein family HMM PF02811. |
| trd_1177 protein network | https://string-db.org/network/309801.trd_1177 | Conserved hypothetical protein TIGR00486; Identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486. |
| glmM protein network | https://string-db.org/network/309801.trd_1178 | Phosphomannomutase; Identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880. |
| trd_1179 protein network | https://string-db.org/network/309801.trd_1179 | Protein of unknown function (DUF402) family; Identified by match to protein family HMM PF04167. |
| trd_1180 protein network | https://string-db.org/network/309801.trd_1180 | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764. |
| trd_1181 protein network | https://string-db.org/network/309801.trd_1181 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1182 protein network | https://string-db.org/network/309801.trd_1182 | Alanine racemase, N-terminal domain family; Identified by match to protein family HMM PF01168. |
| purN protein network | https://string-db.org/network/309801.trd_1183 | Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...] |
| guaA protein network | https://string-db.org/network/309801.trd_1184 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. |
| trd_1185 protein network | https://string-db.org/network/309801.trd_1185 | Nitrate/nitrite response regulator protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. |
| purD protein network | https://string-db.org/network/309801.trd_1186 | Phosphoribosylamine--glycine ligase; Identified by match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR0 [...] |
| trd_1187 protein network | https://string-db.org/network/309801.trd_1187 | Putative hydrolase, NUDIX family; Identified by match to protein family HMM PF00293. |
| ade protein network | https://string-db.org/network/309801.trd_1190 | Adenine deaminase; Identified by match to protein family HMM PF01979; match to protein family HMM TIGR01178; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. |
| trd_1191 protein network | https://string-db.org/network/309801.trd_1191 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1192 protein network | https://string-db.org/network/309801.trd_1192 | Putative MerR-family transcriptional regulator; Identified by match to protein family HMM PF00376. |
| trd_1193 protein network | https://string-db.org/network/309801.trd_1193 | Conserved hypothetical protein TIGR00259; Identified by match to protein family HMM PF03437; match to protein family HMM TIGR00259. |
| recJ protein network | https://string-db.org/network/309801.trd_1194 | single-stranded-DNA-specific exonuclease RecJ; Identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644. |
| trd_1195 protein network | https://string-db.org/network/309801.trd_1195 | Transcriptional repressor; Identified by match to protein family HMM PF01325; match to protein family HMM PF02742; match to protein family HMM PF04023. |
| trd_1196 protein network | https://string-db.org/network/309801.trd_1196 | Identified by match to protein family HMM PF00149. |
| trd_1197 protein network | https://string-db.org/network/309801.trd_1197 | Isoprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. |
| trd_1198 protein network | https://string-db.org/network/309801.trd_1198 | Conserved hypothetical protein; Identified by match to protein family HMM PF08735. |
| trd_1199 protein network | https://string-db.org/network/309801.trd_1199 | Putative Zn-dependent protease; Identified by match to protein family HMM PF04298. |
| trd_1200 protein network | https://string-db.org/network/309801.trd_1200 | Hypothetical protein; Identified by glimmer; putative. |
| clpX protein network | https://string-db.org/network/309801.trd_1201 | ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...] |
| clpP protein network | https://string-db.org/network/309801.trd_1202 | Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belong [...] |
| tig protein network | https://string-db.org/network/309801.trd_1203 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs t [...] |
| trd_1204 protein network | https://string-db.org/network/309801.trd_1204 | Conserved hypothetical protein. |
| trd_1205 protein network | https://string-db.org/network/309801.trd_1205 | Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF06240. |
| trd_1206 protein network | https://string-db.org/network/309801.trd_1206 | [2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799. |
| trd_1207 protein network | https://string-db.org/network/309801.trd_1207 | Oxidoreductase, large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. |
| trd_1208 protein network | https://string-db.org/network/309801.trd_1208 | Carbon monoxide dehydrogenase medium chain; Identified by match to protein family HMM PF00941; match to protein family HMM PF03450. |
| trd_1209 protein network | https://string-db.org/network/309801.trd_1209 | Putative ATPase, AAA family; Identified by match to protein family HMM PF00004; match to protein family HMM PF07726; match to protein family HMM PF07728. |
| trd_1210 protein network | https://string-db.org/network/309801.trd_1210 | VWA domain containing CoxE-like protein; Identified by match to protein family HMM PF05762. |
| trd_1211 protein network | https://string-db.org/network/309801.trd_1211 | Putative xanthine dehydrogenase accessory factor subfamily, putative; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to ex [...] |
| trd_1212 protein network | https://string-db.org/network/309801.trd_1212 | Putative xanthine dehydrogenase accessory factor subfamily, putative; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to ex [...] |
| trd_1213 protein network | https://string-db.org/network/309801.trd_1213 | Conserved hypothetical protein. |
| trd_1214 protein network | https://string-db.org/network/309801.trd_1214 | Identified by match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. |
| trd_1215 protein network | https://string-db.org/network/309801.trd_1215 | Carbon-monoxide dehydrogenase, large subunit; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. |
| trd_1216 protein network | https://string-db.org/network/309801.trd_1216 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1217 protein network | https://string-db.org/network/309801.trd_1217 | Identified by match to protein family HMM PF01578; match to protein family HMM TIGR01191. |
| trd_1218 protein network | https://string-db.org/network/309801.trd_1218 | Identified by match to protein family HMM PF01061. |
| ccmA protein network | https://string-db.org/network/309801.trd_1219 | Heme ABC exporter, ATP-binding protein CcmA; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01189. |
| trd_1220 protein network | https://string-db.org/network/309801.trd_1220 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1221 protein network | https://string-db.org/network/309801.trd_1221 | CcmH, cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase. |
| trd_1222 protein network | https://string-db.org/network/309801.trd_1222 | Cytochrome C-type biogenesis protein; Identified by match to protein family HMM PF01578. |
| trd_1223 protein network | https://string-db.org/network/309801.trd_1223 | Cytochrome c-type biogenesis protein CycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in [...] |
| trd_1224 protein network | https://string-db.org/network/309801.trd_1224 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1225 protein network | https://string-db.org/network/309801.trd_1225 | C-type cytochrome biogenesis protein/thioredoxin dsbE; Identified by match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534. |
| murA protein network | https://string-db.org/network/309801.trd_1226 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. |
| atpC protein network | https://string-db.org/network/309801.trd_1227 | ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. |
| atpD protein network | https://string-db.org/network/309801.trd_1228 | ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase [...] |
| atpG protein network | https://string-db.org/network/309801.trd_1229 | ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the f [...] |
| atpA protein network | https://string-db.org/network/309801.trd_1230 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains fa [...] |
| atpH protein network | https://string-db.org/network/309801.trd_1231 | ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...] |
| atpF protein network | https://string-db.org/network/309801.trd_1232 | ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. |
| atpE protein network | https://string-db.org/network/309801.trd_1233 | ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extra [...] |
| atpB protein network | https://string-db.org/network/309801.trd_1234 | ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. |
| trd_1235 protein network | https://string-db.org/network/309801.trd_1235 | Hypothetical protein; Identified by glimmer; putative. |
| pyrG protein network | https://string-db.org/network/309801.trd_1236 | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...] |
| trd_1237 protein network | https://string-db.org/network/309801.trd_1237 | Conserved hypothetical protein. |
| recX protein network | https://string-db.org/network/309801.trd_1238 | Regulatory protein recX; Modulates RecA activity; Belongs to the RecX family. |
| trd_1239 protein network | https://string-db.org/network/309801.trd_1239 | Uncharacterized ACR; COG1434 superfamily; identified by match to protein family HMM PF02698. |
| leuS protein network | https://string-db.org/network/309801.trd_1240 | leucyl-tRNA synthetase; Identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; Belongs [...] |
| trd_1241 protein network | https://string-db.org/network/309801.trd_1241 | Hypothetical protein; Identified by glimmer; putative. |
| rimO protein network | https://string-db.org/network/309801.trd_1243 | MiaB-like tRNA modifying enzyme YliG, TIGR01125; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. |
| trd_1244 protein network | https://string-db.org/network/309801.trd_1244 | CDP-alcohol phosphatidyltransferase family; Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. |
| trd_1245 protein network | https://string-db.org/network/309801.trd_1245 | Protein of unknown function (DUF1648) family; Identified by match to protein family HMM PF07853. |
| trd_1246 protein network | https://string-db.org/network/309801.trd_1246 | Putative post-translocation molecular chaperone; Identified by match to protein family HMM PF00639. |
| rpsR protein network | https://string-db.org/network/309801.trd_1247 | 30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosom [...] |
| trd_1248 protein network | https://string-db.org/network/309801.trd_1248 | Single-stranded DNA binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621. |
| rpsF protein network | https://string-db.org/network/309801.trd_1249 | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. |
| trd_1250 protein network | https://string-db.org/network/309801.trd_1250 | Hypothetical protein; Identified by glimmer; putative. |
| thrB protein network | https://string-db.org/network/309801.trd_1251 | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. |
| thrC protein network | https://string-db.org/network/309801.trd_1252 | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. |
| trd_1253 protein network | https://string-db.org/network/309801.trd_1253 | Oligopeptide transport system permease protein appC; Identified by match to protein family HMM PF00528. |
| trd_1254 protein network | https://string-db.org/network/309801.trd_1254 | Oligopeptide transport system permease protein appB; Identified by match to protein family HMM PF00528. |
| trd_1255 protein network | https://string-db.org/network/309801.trd_1255 | Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. |
| trd_1256 protein network | https://string-db.org/network/309801.trd_1256 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1257 protein network | https://string-db.org/network/309801.trd_1257 | Conserved hypothetical protein. |
| glgA protein network | https://string-db.org/network/309801.trd_1258 | Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. |
| glgC protein network | https://string-db.org/network/309801.trd_1259 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between AT [...] |
| accD protein network | https://string-db.org/network/309801.trd_1260 | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carr [...] |
| accA protein network | https://string-db.org/network/309801.trd_1261 | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its c [...] |
| trd_1262 protein network | https://string-db.org/network/309801.trd_1262 | Probable HspC2 heat shock protein; Identified by match to protein family HMM PF00011; Belongs to the small heat shock protein (HSP20) family. |
| trd_1263 protein network | https://string-db.org/network/309801.trd_1263 | Identified by match to protein family HMM PF00571; match to protein family HMM PF02163; Belongs to the peptidase M50B family. |
| pyrB protein network | https://string-db.org/network/309801.trd_1264 | Aspartate carbamoyltransferase; Identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to the aspartate/ornithine c [...] |
| trd_1265 protein network | https://string-db.org/network/309801.trd_1265 | RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. |
| trd_1266 protein network | https://string-db.org/network/309801.trd_1266 | RecF/RecN/SMC N terminal domain protein; Identified by match to protein family HMM PF02463. |
| trd_1267 protein network | https://string-db.org/network/309801.trd_1267 | Putative protease/transporter; Identified by match to protein family HMM PF01957. |
| trd_1268 protein network | https://string-db.org/network/309801.trd_1268 | Mechanosensory protein 2; Identified by match to protein family HMM PF01145. |
| trd_1269 protein network | https://string-db.org/network/309801.trd_1269 | Protease IV, signal peptide peptidase; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706. |
| trd_1270 protein network | https://string-db.org/network/309801.trd_1270 | Hypothetical conserved protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/deph [...] |
| trd_1271 protein network | https://string-db.org/network/309801.trd_1271 | Similar to A. fulgidus predicted coding region. |
| trd_1272 protein network | https://string-db.org/network/309801.trd_1272 | Putative membrane protein. |
| trd_1273 protein network | https://string-db.org/network/309801.trd_1273 | Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| trd_1274 protein network | https://string-db.org/network/309801.trd_1274 | Two-component sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. |
| trd_1275 protein network | https://string-db.org/network/309801.trd_1275 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| dxs protein network | https://string-db.org/network/309801.trd_1276 | 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (D [...] |
| gidB protein network | https://string-db.org/network/309801.trd_1277 | Methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. |
| trd_1278 protein network | https://string-db.org/network/309801.trd_1278 | Putative pyridine nucleotide-disulphide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01266; match to protein family HMM PF02852; match to prote [...] |
| trd_1279 protein network | https://string-db.org/network/309801.trd_1279 | Dipeptide transport system permease protein dppB; Identified by match to protein family HMM PF00528. |
| trd_1280 protein network | https://string-db.org/network/309801.trd_1280 | Inner membrane ABC transporter permease protein yddQ; Identified by match to protein family HMM PF00528. |
| trd_1281 protein network | https://string-db.org/network/309801.trd_1281 | Putative oligopeptide ABC transporter substrate-binding protein; Identified by match to protein family HMM PF00496. |
| trd_1282 protein network | https://string-db.org/network/309801.trd_1282 | Putative arginine deiminase; Identified by match to protein family HMM PF02274. |
| trd_1283 protein network | https://string-db.org/network/309801.trd_1283 | Putative hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01460. |
| trd_1284 protein network | https://string-db.org/network/309801.trd_1284 | Putative hydroxyindole O-methyltransferase; Identified by match to protein family HMM PF00891; match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_1285 protein network | https://string-db.org/network/309801.trd_1285 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase; Identified by match to protein family HMM PF00535. |
| trd_1286 protein network | https://string-db.org/network/309801.trd_1286 | Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_1288 protein network | https://string-db.org/network/309801.trd_1288 | Identified by match to protein family HMM PF00994; match to protein family HMM TIGR00200; Belongs to the CinA family. |
| ybeY protein network | https://string-db.org/network/309801.trd_1289 | Putative conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the [...] |
| trd_1290 protein network | https://string-db.org/network/309801.trd_1290 | 7TM-HD extracellular domain protein; Identified by match to protein family HMM PF01966; match to protein family HMM PF07697; match to protein family HMM TIGR00277. |
| trd_1291 protein network | https://string-db.org/network/309801.trd_1291 | GatB/Yqey domain superfamily; Identified by match to protein family HMM PF02637. |
| trd_1292 protein network | https://string-db.org/network/309801.trd_1292 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1294 protein network | https://string-db.org/network/309801.trd_1294 | Putative lipoprotein. |
| trd_1295 protein network | https://string-db.org/network/309801.trd_1295 | Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_1296 protein network | https://string-db.org/network/309801.trd_1296 | Putative lipoprotein. |
| trd_1297 protein network | https://string-db.org/network/309801.trd_1297 | Putative membrane protein. |
| trd_1298 protein network | https://string-db.org/network/309801.trd_1298 | Putative membrane protein. |
| trd_1299 protein network | https://string-db.org/network/309801.trd_1299 | Glycosyltransferase; Identified by match to protein family HMM PF00534. |
| groL protein network | https://string-db.org/network/309801.trd_1300 | Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. |
| groS protein network | https://string-db.org/network/309801.trd_1301 | Chaperonin, 10 kDa; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. |
| trd_1302 protein network | https://string-db.org/network/309801.trd_1302 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1303 protein network | https://string-db.org/network/309801.trd_1303 | Aspartate aminotransferase A; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266. |
| trd_1304 protein network | https://string-db.org/network/309801.trd_1304 | Hypothetical protein; Identified by glimmer; putative. |
| selD protein network | https://string-db.org/network/309801.trd_1305 | Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. |
| ksgA protein network | https://string-db.org/network/309801.trd_1306 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...] |
| ispE protein network | https://string-db.org/network/309801.trd_1307 | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. |
| trd_1308 protein network | https://string-db.org/network/309801.trd_1308 | Identified by match to protein family HMM PF03061. |
| trd_1309 protein network | https://string-db.org/network/309801.trd_1309 | Molybdopterin biosynthesis protein; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237. |
| trd_1310 protein network | https://string-db.org/network/309801.trd_1310 | Identified by match to protein family HMM PF01398. |
| trd_1311 protein network | https://string-db.org/network/309801.trd_1311 | Molybdopterin converting factor, subunit 1; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01687. |
| trd_1312 protein network | https://string-db.org/network/309801.trd_1312 | Cysteine synthase B; Identified by match to protein family HMM PF00291. |
| trd_1313 protein network | https://string-db.org/network/309801.trd_1313 | Stk1; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714. |
| trd_1314 protein network | https://string-db.org/network/309801.trd_1314 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1315 protein network | https://string-db.org/network/309801.trd_1315 | Cytochrome C and Quinol oxidase polypeptide I superfamily; Identified by match to protein family HMM PF00115. |
| trd_1316 protein network | https://string-db.org/network/309801.trd_1316 | Amino acid permease superfamily; Identified by match to protein family HMM PF00324. |
| trd_1317 protein network | https://string-db.org/network/309801.trd_1317 | Amino acid permease superfamily; Identified by match to protein family HMM PF00324. |
| trd_1318 protein network | https://string-db.org/network/309801.trd_1318 | Putative cyclase superfamily; Identified by match to protein family HMM PF04199. |
| trd_1319 protein network | https://string-db.org/network/309801.trd_1319 | Identified by match to protein family HMM PF00149. |
| trd_1320 protein network | https://string-db.org/network/309801.trd_1320 | Conserved hypothetical protein. |
| trd_1321 protein network | https://string-db.org/network/309801.trd_1321 | Putative MOSC domain; Identified by match to protein family HMM PF03473. |
| trd_1322 protein network | https://string-db.org/network/309801.trd_1322 | Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047. |
| trd_1323 protein network | https://string-db.org/network/309801.trd_1323 | Putative gluconokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. |
| folK protein network | https://string-db.org/network/309801.trd_1324 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498. |
| folP protein network | https://string-db.org/network/309801.trd_1325 | Dihydropteroate synthase; Identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496. |
| folB protein network | https://string-db.org/network/309801.trd_1326 | Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. |
| trd_1327 protein network | https://string-db.org/network/309801.trd_1327 | Putative membrane protein. |
| trd_1328 protein network | https://string-db.org/network/309801.trd_1328 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1329 protein network | https://string-db.org/network/309801.trd_1329 | Putative site-specific recombinase, phage integrase family; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. |
| trd_1330 protein network | https://string-db.org/network/309801.trd_1330 | Conserved hypothetical protein. |
| ggt-3 protein network | https://string-db.org/network/309801.trd_1331 | Gamma-glutamyltransferase; Identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066. |
| trd_1332 protein network | https://string-db.org/network/309801.trd_1332 | Hypothetical membrane protein, conserved, family; Identified by match to protein family HMM PF01925. |
| trd_1333 protein network | https://string-db.org/network/309801.trd_1333 | Conserved hypothetical protein; Identified by match to protein family HMM PF07843. |
| trd_1334 protein network | https://string-db.org/network/309801.trd_1334 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1335 protein network | https://string-db.org/network/309801.trd_1335 | Putative Domain of unknown function; Identified by match to protein family HMM PF01925. |
| trd_1336 protein network | https://string-db.org/network/309801.trd_1336 | Cell envelope-related transcriptional attenuator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. |
| trd_1337 protein network | https://string-db.org/network/309801.trd_1337 | Copper binding proteins, plastocyanin/azurin family; Identified by match to protein family HMM PF00127. |
| trd_1338 protein network | https://string-db.org/network/309801.trd_1338 | Putative cytochrome c heme-binding subunit. |
| trd_1339 protein network | https://string-db.org/network/309801.trd_1339 | Threonine synthase; Identified by match to protein family HMM PF00291. |
| trd_1340 protein network | https://string-db.org/network/309801.trd_1340 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. |
| trd_1341 protein network | https://string-db.org/network/309801.trd_1341 | Appr-1-p processing enzyme family protein; Identified by match to protein family HMM PF01661. |
| trd_1342 protein network | https://string-db.org/network/309801.trd_1342 | Tartrate dehydrogenase; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR02089. |
| trd_1343 protein network | https://string-db.org/network/309801.trd_1343 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to t [...] |
| trd_1344 protein network | https://string-db.org/network/309801.trd_1344 | DedA family; Identified by match to protein family HMM PF09335. |
| trd_1345 protein network | https://string-db.org/network/309801.trd_1345 | Putative dehydrogenase; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560. |
| trd_1348 protein network | https://string-db.org/network/309801.trd_1348 | Identified by match to protein family HMM PF07883. |
| metE protein network | https://string-db.org/network/309801.trd_1349 | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation [...] |
| trd_1350 protein network | https://string-db.org/network/309801.trd_1350 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1351 protein network | https://string-db.org/network/309801.trd_1351 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1352 protein network | https://string-db.org/network/309801.trd_1352 | Uncharacterized ACR (DUF711) superfamily; Identified by match to protein family HMM PF05167. |
| trd_1353 protein network | https://string-db.org/network/309801.trd_1353 | Beta-lactamase; Identified by match to protein family HMM PF00144. |
| trd_1354 protein network | https://string-db.org/network/309801.trd_1354 | Conserved hypothetical protein; Similar to chain A, Crystal Structure Of The Conserved Protein Tt1542 From Thermus Thermophilus Hb8; identified by match to protein family HMM PF02585. |
| trd_1355 protein network | https://string-db.org/network/309801.trd_1355 | Putative oxidoreductase. |
| trd_1356 protein network | https://string-db.org/network/309801.trd_1356 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1357 protein network | https://string-db.org/network/309801.trd_1357 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1358 protein network | https://string-db.org/network/309801.trd_1358 | Putative frnE protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_1359 protein network | https://string-db.org/network/309801.trd_1359 | DoxX subfamily; Identified by match to protein family HMM PF07681. |
| trd_1360 protein network | https://string-db.org/network/309801.trd_1360 | YceI like family; Identified by match to protein family HMM PF04264; Belongs to the UPF0312 family. |
| trd_1361 protein network | https://string-db.org/network/309801.trd_1361 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1362 protein network | https://string-db.org/network/309801.trd_1362 | Hypothetical conserved protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF01638. |
| trd_1363 protein network | https://string-db.org/network/309801.trd_1363 | Periplasmic binding protein. |
| trd_1364 protein network | https://string-db.org/network/309801.trd_1364 | Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. |
| trd_1365 protein network | https://string-db.org/network/309801.trd_1365 | Putative integral membrane protein. |
| trd_1366 protein network | https://string-db.org/network/309801.trd_1366 | Transcriptional regulatory protein degU; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. |
| trd_1367 protein network | https://string-db.org/network/309801.trd_1367 | GAF domain protein; Identified by match to protein family HMM PF01590. |
| trd_1369 protein network | https://string-db.org/network/309801.trd_1369 | Identified by match to protein family HMM PF00753. |
| trd_1370 protein network | https://string-db.org/network/309801.trd_1370 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1371 protein network | https://string-db.org/network/309801.trd_1371 | Identified by match to protein family HMM PF03734. |
| trd_1372 protein network | https://string-db.org/network/309801.trd_1372 | Deoxyribodipyrimidine photo-lyase; Identified by match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family. |
| trd_1373 protein network | https://string-db.org/network/309801.trd_1373 | Penicillin-binding protein 2; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF05223; match to protein family HMM TIGR03423. |
| trd_1374 protein network | https://string-db.org/network/309801.trd_1374 | Probable phytoene dehydrogenase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593. |
| prs-2 protein network | https://string-db.org/network/309801.trd_1375 | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hy [...] |
| rnc protein network | https://string-db.org/network/309801.trd_1376 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...] |
| trd_1377 protein network | https://string-db.org/network/309801.trd_1377 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1378 protein network | https://string-db.org/network/309801.trd_1378 | Uncharacterized ACR; COG1993 subfamily; identified by match to protein family HMM PF02641. |
| crcB protein network | https://string-db.org/network/309801.trd_1379 | crcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. |
| tatA-3 protein network | https://string-db.org/network/309801.trd_1380 | Conserved domain protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide acros [...] |
| hemG protein network | https://string-db.org/network/309801.trd_1381 | Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. |
| trd_1382 protein network | https://string-db.org/network/309801.trd_1382 | Exopolysaccharide biosynthesis protein; Identified by match to protein family HMM PF02811. |
| hemH protein network | https://string-db.org/network/309801.trd_1383 | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. |
| hemE protein network | https://string-db.org/network/309801.trd_1384 | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. |
| trd_1385 protein network | https://string-db.org/network/309801.trd_1385 | Putative methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015. |
| trd_1386 protein network | https://string-db.org/network/309801.trd_1386 | Putative lipoprotein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_1387 protein network | https://string-db.org/network/309801.trd_1387 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Identified by match to protein family HMM PF01689. |
| trd_1388 protein network | https://string-db.org/network/309801.trd_1388 | 4-oxalocrotonate decarboxylase; Identified by match to protein family HMM PF01689. |
| trd_1389 protein network | https://string-db.org/network/309801.trd_1389 | Putative tautomerase; Identified by match to protein family HMM PF01361; Belongs to the 4-oxalocrotonate tautomerase family. |
| trd_1390 protein network | https://string-db.org/network/309801.trd_1390 | Putative hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561. |
| trd_1391 protein network | https://string-db.org/network/309801.trd_1391 | StyB protein; Identified by match to protein family HMM PF01613. |
| trd_1392 protein network | https://string-db.org/network/309801.trd_1392 | 4-hydroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of a [...] |
| trd_1393 protein network | https://string-db.org/network/309801.trd_1393 | Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic c [...] |
| trd_1394 protein network | https://string-db.org/network/309801.trd_1394 | Putative transcriptional regulator; Identified by match to protein family HMM PF01614; match to protein family HMM PF09339. |
| trd_1395 protein network | https://string-db.org/network/309801.trd_1395 | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component; Identified by match to protein family HMM PF03241. |
| trd_1396 protein network | https://string-db.org/network/309801.trd_1396 | Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903. |
| trd_1397 protein network | https://string-db.org/network/309801.trd_1397 | Putative ABC transporter substrate binding protein; Identified by match to protein family HMM PF01094. |
| trd_1398 protein network | https://string-db.org/network/309801.trd_1398 | ABC-transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. |
| trd_1399 protein network | https://string-db.org/network/309801.trd_1399 | Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. |
| trd_1400 protein network | https://string-db.org/network/309801.trd_1400 | Putative branched amino acid related transport system, bifunctional protein; Identified by match to protein family HMM PF00005. |
| trd_1401 protein network | https://string-db.org/network/309801.trd_1401 | Branched-chain amino acid ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| trd_1402 protein network | https://string-db.org/network/309801.trd_1402 | Identified by match to protein family HMM PF04909. |
| trd_1403 protein network | https://string-db.org/network/309801.trd_1403 | Putative branched-chain amino acid binding protein; Identified by match to protein family HMM PF01094. |
| trd_1404 protein network | https://string-db.org/network/309801.trd_1404 | ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. |
| trd_1405 protein network | https://string-db.org/network/309801.trd_1405 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease fa [...] |
| trd_1406 protein network | https://string-db.org/network/309801.trd_1406 | High-affinity branched-chain amino acid transport ATP-binding proteinlivF; Identified by match to protein family HMM PF00005. |
| trd_1407 protein network | https://string-db.org/network/309801.trd_1407 | Receptor family ligand binding region; Identified by match to protein family HMM PF01094. |
| trd_1408 protein network | https://string-db.org/network/309801.trd_1408 | Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; [...] |
| trd_1409 protein network | https://string-db.org/network/309801.trd_1409 | Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [...] |
| trd_1410 protein network | https://string-db.org/network/309801.trd_1410 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1411 protein network | https://string-db.org/network/309801.trd_1411 | Glycosyltransferase, MGT family; Identified by match to protein family HMM TIGR01426. |
| trd_1412 protein network | https://string-db.org/network/309801.trd_1412 | Conserved hypothetical protein. |
| trd_1413 protein network | https://string-db.org/network/309801.trd_1413 | Conserved hypothetical protein. |
| trd_1414 protein network | https://string-db.org/network/309801.trd_1414 | Cation-transporting ATPase pacS; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR00003 [...] |
| trd_1415 protein network | https://string-db.org/network/309801.trd_1415 | Uncharacterized BCR; COG1937 family; identified by match to protein family HMM PF02583. |
| trd_1416 protein network | https://string-db.org/network/309801.trd_1416 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1417 protein network | https://string-db.org/network/309801.trd_1417 | Putative poly-gamma-glutamate biosynthesis enzyme. |
| trd_1418 protein network | https://string-db.org/network/309801.trd_1418 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1419 protein network | https://string-db.org/network/309801.trd_1419 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1420 protein network | https://string-db.org/network/309801.trd_1420 | EAL domain protein; Identified by match to protein family HMM PF00563. |
| trd_1421 protein network | https://string-db.org/network/309801.trd_1421 | Glutamate-1-semialdehyde 2,1-aminomutase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotrans [...] |
| trd_1422 protein network | https://string-db.org/network/309801.trd_1422 | Conserved domain protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. |
| trd_1423 protein network | https://string-db.org/network/309801.trd_1423 | Hypothetical protein; Identified by glimmer; putative. |
| rpmE protein network | https://string-db.org/network/309801.trd_1424 | Conserved domain protein; Binds the 23S rRNA. |
| rpmA protein network | https://string-db.org/network/309801.trd_1425 | Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. |
| rplU protein network | https://string-db.org/network/309801.trd_1426 | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. |
| trd_1427 protein network | https://string-db.org/network/309801.trd_1427 | Putative membrane protein. |
| trd_1428 protein network | https://string-db.org/network/309801.trd_1428 | Hypothetical protein; Identified by glimmer; putative. |
| argF protein network | https://string-db.org/network/309801.trd_1429 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs t [...] |
| trd_1430 protein network | https://string-db.org/network/309801.trd_1430 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1434 protein network | https://string-db.org/network/309801.trd_1434 | Small heat shock protein; Identified by match to protein family HMM PF00011; match to protein family HMM PF04969; Belongs to the small heat shock protein (HSP20) family. |
| trd_1435 protein network | https://string-db.org/network/309801.trd_1435 | Rod shape-determining protein RodA; Identified by match to protein family HMM PF01098; Belongs to the SEDS family. |
| trd_1436 protein network | https://string-db.org/network/309801.trd_1436 | Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalentl [...] |
| trd_1437 protein network | https://string-db.org/network/309801.trd_1437 | Sporulation initiation inhibitor protein soj; Identified by match to protein family HMM PF01656. |
| guaB protein network | https://string-db.org/network/309801.trd_1438 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...] |
| trd_1439 protein network | https://string-db.org/network/309801.trd_1439 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1440 protein network | https://string-db.org/network/309801.trd_1440 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1441 protein network | https://string-db.org/network/309801.trd_1441 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1442 protein network | https://string-db.org/network/309801.trd_1442 | Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296; match to protein family HMM TIGR03560. |
| trd_1443 protein network | https://string-db.org/network/309801.trd_1443 | Conserved hypothetical protein. |
| trd_1444 protein network | https://string-db.org/network/309801.trd_1444 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1445 protein network | https://string-db.org/network/309801.trd_1445 | Putative cyclase superfamily; Identified by match to protein family HMM PF04199. |
| trd_1446 protein network | https://string-db.org/network/309801.trd_1446 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1447 protein network | https://string-db.org/network/309801.trd_1447 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1448 protein network | https://string-db.org/network/309801.trd_1448 | Putative integral membrane protein; Identified by match to protein family HMM PF07690. |
| trd_1449 protein network | https://string-db.org/network/309801.trd_1449 | Cation transport ATPases; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to [...] |
| trd_1450 protein network | https://string-db.org/network/309801.trd_1450 | Putative FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266. |
| trd_1451 protein network | https://string-db.org/network/309801.trd_1451 | Magnesium transporting ATPase, P-type 1; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene mo [...] |
| trd_1452 protein network | https://string-db.org/network/309801.trd_1452 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| dnaJ protein network | https://string-db.org/network/309801.trd_1453 | Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...] |
| trd_1454 protein network | https://string-db.org/network/309801.trd_1454 | Conserved hypothetical protein. |
| trd_1455 protein network | https://string-db.org/network/309801.trd_1455 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1456 protein network | https://string-db.org/network/309801.trd_1456 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1457 protein network | https://string-db.org/network/309801.trd_1457 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1458 protein network | https://string-db.org/network/309801.trd_1458 | Probable 4-aminobutyrate aminotransferase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. |
| trd_1459 protein network | https://string-db.org/network/309801.trd_1459 | Putative carboxypeptidase G2; Identified by match to protein family HMM PF01546; match to protein family HMM PF07687. |
| trd_1460 protein network | https://string-db.org/network/309801.trd_1460 | Protein of unknown function superfamily; Identified by match to protein family HMM PF01936. |
| dapB-2 protein network | https://string-db.org/network/309801.trd_1461 | Dihydrodipicolinate reductase, N-terminus domain protein; Identified by match to protein family HMM PF01113. |
| trd_1462 protein network | https://string-db.org/network/309801.trd_1462 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1463 protein network | https://string-db.org/network/309801.trd_1463 | Putative hydrolase; Identified by match to protein family HMM PF03747. |
| trd_1464 protein network | https://string-db.org/network/309801.trd_1464 | Hydrolase, CbbY/CbbZ/GpH/YieH family; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. |
| trd_1465 protein network | https://string-db.org/network/309801.trd_1465 | Putative membrane protein. |
| trd_1466 protein network | https://string-db.org/network/309801.trd_1466 | Conserved hypothetical protein. |
| trd_1467 protein network | https://string-db.org/network/309801.trd_1467 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1468 protein network | https://string-db.org/network/309801.trd_1468 | Aldehyde dehydrogenase (nadp) family protein; Identified by match to protein family HMM PF00171; match to protein family HMM PF05893. |
| trd_1469 protein network | https://string-db.org/network/309801.trd_1469 | Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206. |
| nuoI protein network | https://string-db.org/network/309801.trd_1470 | Nadh-quinone oxidoreductase chain i; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| trd_1471 protein network | https://string-db.org/network/309801.trd_1471 | Formate dehydrogenase, alpha subunit homolog; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family [...] |
| trd_1472 protein network | https://string-db.org/network/309801.trd_1472 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1473 protein network | https://string-db.org/network/309801.trd_1473 | Hypothetical protein; Identified by glimmer; putative. |
| gatB protein network | https://string-db.org/network/309801.trd_1474 | glutaminyl-tRNA synthase, glutamine-hydrolyzing, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu [...] |
| trd_1476 protein network | https://string-db.org/network/309801.trd_1476 | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. |
| trd_1477 protein network | https://string-db.org/network/309801.trd_1477 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1478 protein network | https://string-db.org/network/309801.trd_1478 | Potassium channel related protein; Identified by match to protein family HMM PF02080; match to protein family HMM PF02254. |
| trd_1479 protein network | https://string-db.org/network/309801.trd_1479 | Trk system potassium uptake protein trkA; Identified by match to protein family HMM PF02254. |
| trd_1480 protein network | https://string-db.org/network/309801.trd_1480 | Identified by match to protein family HMM PF00582. |
| trd_1481 protein network | https://string-db.org/network/309801.trd_1481 | Identified by match to protein family HMM PF00149. |
| trd_1482 protein network | https://string-db.org/network/309801.trd_1482 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1483 protein network | https://string-db.org/network/309801.trd_1483 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1484 protein network | https://string-db.org/network/309801.trd_1484 | Transcription regulator, ArsR family; Identified by match to protein family HMM PF01022. |
| trd_1485 protein network | https://string-db.org/network/309801.trd_1485 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1486 protein network | https://string-db.org/network/309801.trd_1486 | Putative integral membrane transporter; Identified by match to protein family HMM PF02683. |
| trd_1487 protein network | https://string-db.org/network/309801.trd_1487 | Transporter, major facilitator family; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. |
| trd_1488 protein network | https://string-db.org/network/309801.trd_1488 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1489 protein network | https://string-db.org/network/309801.trd_1489 | Putative efflux protein; Identified by match to protein family HMM PF07690. |
| trd_1490 protein network | https://string-db.org/network/309801.trd_1490 | Cupin domain protein; Identified by match to protein family HMM PF07883. |
| trd_1491 protein network | https://string-db.org/network/309801.trd_1491 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1492 protein network | https://string-db.org/network/309801.trd_1492 | Dihydrolipoamide S-acetyltransferase; Identified by match to protein family HMM PF00364; match to protein family HMM PF00561; match to protein family HMM PF02129; match to protein family HMM PF02 [...] |
| trd_1493 protein network | https://string-db.org/network/309801.trd_1493 | TPP-dependent acetoin dehydrogenase alpha-subunit; Identified by match to protein family HMM PF00676. |
| trd_1494 protein network | https://string-db.org/network/309801.trd_1494 | 2-oxoisovalerate dehydrogenase beta subunit; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. |
| trd_1495 protein network | https://string-db.org/network/309801.trd_1495 | Acetoin catabolism protein X; Identified by match to protein family HMM PF01513. |
| trd_1496 protein network | https://string-db.org/network/309801.trd_1496 | Identified by match to protein family HMM PF02308. |
| trd_1497 protein network | https://string-db.org/network/309801.trd_1497 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1498 protein network | https://string-db.org/network/309801.trd_1498 | Putative membrane protein mmpL7. |
| trd_1499 protein network | https://string-db.org/network/309801.trd_1499 | Putative lipoprotein. |
| trd_1500 protein network | https://string-db.org/network/309801.trd_1500 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1501 protein network | https://string-db.org/network/309801.trd_1501 | RNA polymerase ECF-type sigma factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor [...] |
| trd_1502 protein network | https://string-db.org/network/309801.trd_1502 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1503 protein network | https://string-db.org/network/309801.trd_1503 | Copper transport ATP-binding protein nosF; Identified by match to protein family HMM PF00005. |
| trd_1504 protein network | https://string-db.org/network/309801.trd_1504 | Putative ABC-type transport system involved in multi-copper enzyme maturation, permease component. |
| trd_1505 protein network | https://string-db.org/network/309801.trd_1505 | Processing protease; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family. |
| trd_1506 protein network | https://string-db.org/network/309801.trd_1506 | Putative metallo-beta-lactamase superfamily; Identified by match to protein family HMM PF00753. |
| trd_1507 protein network | https://string-db.org/network/309801.trd_1507 | Competence/damage-inducible protein CinA C-terminal domain; Identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family. |
| trd_1508 protein network | https://string-db.org/network/309801.trd_1508 | Putative membrane transport protein; Identified by match to protein family HMM PF07690. |
| trd_1509 protein network | https://string-db.org/network/309801.trd_1509 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1510 protein network | https://string-db.org/network/309801.trd_1510 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1511 protein network | https://string-db.org/network/309801.trd_1511 | Putative 3-methyladenine DNA glycosylase; Identified by match to protein family HMM PF02245; match to protein family HMM TIGR00567; Belongs to the DNA glycosylase MPG family. |
| valS protein network | https://string-db.org/network/309801.trd_1512 | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...] |
| trd_1513 protein network | https://string-db.org/network/309801.trd_1513 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1514 protein network | https://string-db.org/network/309801.trd_1514 | Hypothetical protein; Identified by glimmer; putative. |
| lysJ protein network | https://string-db.org/network/309801.trd_1515 | Acetylornithine aminotransferase; Catalyzes the transfer of the amino group of L-glutamate to [LysW]-aminoadipate 6-semialdehyde, generating [LysW]-gamma-L-lysine. Belongs to the class-III pyrido [...] |
| argB protein network | https://string-db.org/network/309801.trd_1516 | Acetylglutamate kinase; Catalyzes the phosphorylation of LysW-gamma-alpha- aminoadipate; Belongs to the acetylglutamate kinase family. LysZ subfamily. |
| trd_1517 protein network | https://string-db.org/network/309801.trd_1517 | Conserved hypothetical protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242. |
| argC protein network | https://string-db.org/network/309801.trd_1518 | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of [LysW]- aminoadipate 6-phosphate to yield [LysW]-aminoadipate 6-semialdehyde. Belongs to the NAGSA dehydrog [...] |
| lysX protein network | https://string-db.org/network/309801.trd_1519 | Lysine biosynthesis enzyme LysX; Identified by match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF08443; [...] |
| lysK protein network | https://string-db.org/network/309801.trd_1520 | N-acetyl-ornithine/N-acetyl-lysine deacetylase subfamily; Catalyzes the release of L-lysine from [LysW]-gamma-L-lysine. |
| trd_1521 protein network | https://string-db.org/network/309801.trd_1521 | Putative lysine biosynthesis enzyme LysX; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene m [...] |
| lysW protein network | https://string-db.org/network/309801.trd_1522 | Lysine biosynthesis protein LysW; Identified by match to protein family HMM TIGR01206. |
| trd_1523 protein network | https://string-db.org/network/309801.trd_1523 | Putative ABC transporter periplasmic binding protein A; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. |
| trd_1524 protein network | https://string-db.org/network/309801.trd_1524 | Dipeptide ABC transporter permease; Identified by match to protein family HMM PF00528. |
| trd_1525 protein network | https://string-db.org/network/309801.trd_1525 | Oligopeptide ABC transporter permease protein; Identified by match to protein family HMM PF00528. |
| trd_1526 protein network | https://string-db.org/network/309801.trd_1526 | Conserved hypothetical protein; Identified by match to protein family HMM PF01022; match to protein family HMM PF08279. |
| trd_1527 protein network | https://string-db.org/network/309801.trd_1527 | Hypothetical protein; Identified by glimmer; putative. |
| cadA protein network | https://string-db.org/network/309801.trd_1528 | Cadmium-translocating P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR0 [...] |
| trd_1529 protein network | https://string-db.org/network/309801.trd_1529 | Putative ArsR-family regulator; Identified by match to protein family HMM PF01022. |
| metG protein network | https://string-db.org/network/309801.trd_1530 | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. |
| trd_1531 protein network | https://string-db.org/network/309801.trd_1531 | Probable soluble lytic murein transglycosylase precursor; Identified by match to protein family HMM PF00515; match to protein family HMM PF01464; match to protein family HMM PF07719; match to pro [...] |
| trd_1532 protein network | https://string-db.org/network/309801.trd_1532 | Conserved hypothetical protein. |
| trd_1533 protein network | https://string-db.org/network/309801.trd_1533 | Conserved hypothetical protein. |
| trd_1534 protein network | https://string-db.org/network/309801.trd_1534 | Conserved hypothetical protein. |
| trd_1535 protein network | https://string-db.org/network/309801.trd_1535 | dolichol-P-glucose synthetase; Identified by match to protein family HMM PF00535. |
| trd_1536 protein network | https://string-db.org/network/309801.trd_1536 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. |
| trd_1538 protein network | https://string-db.org/network/309801.trd_1538 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1539 protein network | https://string-db.org/network/309801.trd_1539 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1540 protein network | https://string-db.org/network/309801.trd_1540 | Putative transcriptional regulator; Identified by match to protein family HMM PF08279. |
| trd_1541 protein network | https://string-db.org/network/309801.trd_1541 | N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosy [...] |
| trd_1542 protein network | https://string-db.org/network/309801.trd_1542 | Putative membrane protein. |
| trd_1543 protein network | https://string-db.org/network/309801.trd_1543 | ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664. |
| trd_1544 protein network | https://string-db.org/network/309801.trd_1544 | Bifunctional protein hldE; Identified by match to protein family HMM PF00294. |
| trd_1545 protein network | https://string-db.org/network/309801.trd_1545 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1546 protein network | https://string-db.org/network/309801.trd_1546 | Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296. |
| trd_1547 protein network | https://string-db.org/network/309801.trd_1547 | Hdac6 protein; Identified by match to protein family HMM PF00850. |
| trd_1548 protein network | https://string-db.org/network/309801.trd_1548 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| uvrB protein network | https://string-db.org/network/309801.trd_1549 | Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...] |
| trd_1551 protein network | https://string-db.org/network/309801.trd_1551 | Putative two-component system response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196. |
| trd_1552 protein network | https://string-db.org/network/309801.trd_1552 | Putative two component system histidine kinase; Identified by match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF07730. |
| trd_1553 protein network | https://string-db.org/network/309801.trd_1553 | HesB/YadR/YfhF; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family. |
| trd_1554 protein network | https://string-db.org/network/309801.trd_1554 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1556 protein network | https://string-db.org/network/309801.trd_1556 | Hypothetical protein; Identified by glimmer; putative. |
| glnA protein network | https://string-db.org/network/309801.trd_1557 | Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653. |
| glnA-2 protein network | https://string-db.org/network/309801.trd_1558 | Glutamine synthetase, type I; Identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653. |
| trd_1559 protein network | https://string-db.org/network/309801.trd_1559 | c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; mat [...] |
| trd_1560 protein network | https://string-db.org/network/309801.trd_1560 | Methylmalonyl Coenzyme A mutase; Identified by match to protein family HMM PF01642; match to protein family HMM TIGR00641. |
| trd_1561 protein network | https://string-db.org/network/309801.trd_1561 | Hypothetical protein; Identified by glimmer; putative. |
| lon-2 protein network | https://string-db.org/network/309801.trd_1562 | ATP-dependent protease La; Identified by match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match [...] |
| trd_1563 protein network | https://string-db.org/network/309801.trd_1563 | Peptidase, M28 family; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF04389. |
| trd_1564 protein network | https://string-db.org/network/309801.trd_1564 | Lipoyltransferase; Identified by match to protein family HMM PF00293. |
| trd_1565 protein network | https://string-db.org/network/309801.trd_1565 | Rod shape-determining protein mreB; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02491; match to protein fa [...] |
| trd_1566 protein network | https://string-db.org/network/309801.trd_1566 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1567 protein network | https://string-db.org/network/309801.trd_1567 | Cysteine desulfurase/cysteine sulfinate desulfinase; Identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein [...] |
| trd_1568 protein network | https://string-db.org/network/309801.trd_1568 | Putative molybdopterin biosynthesis MoeB protein; Identified by match to protein family HMM PF00899; match to protein family HMM PF05237. |
| trd_1569 protein network | https://string-db.org/network/309801.trd_1569 | Prephenate dehydrogenase; Identified by match to protein family HMM PF02153; match to protein family HMM PF02737; match to protein family HMM PF03807. |
| trd_1570 protein network | https://string-db.org/network/309801.trd_1570 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1571 protein network | https://string-db.org/network/309801.trd_1571 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1572 protein network | https://string-db.org/network/309801.trd_1572 | Aldh; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. |
| trd_1573 protein network | https://string-db.org/network/309801.trd_1573 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1574 protein network | https://string-db.org/network/309801.trd_1574 | Putative monooxygenase; Identified by match to protein family HMM PF00296. |
| trd_1575 protein network | https://string-db.org/network/309801.trd_1575 | Putative lipoprotein. |
| trd_1576 protein network | https://string-db.org/network/309801.trd_1576 | Putative lipoprotein. |
| trd_1577 protein network | https://string-db.org/network/309801.trd_1577 | Putative lipoprotein. |
| trd_1578 protein network | https://string-db.org/network/309801.trd_1578 | Conserved hypothetical protein. |
| trd_1579 protein network | https://string-db.org/network/309801.trd_1579 | Uroporphyrinogen decarboxylase; Identified by match to protein family HMM PF01208; Belongs to the uroporphyrinogen decarboxylase family. |
| trd_1580 protein network | https://string-db.org/network/309801.trd_1580 | Hypothetical protein; Identified by glimmer; putative. |
| cad protein network | https://string-db.org/network/309801.trd_1581 | Lysine decarboxylase; Identified by match to protein family HMM PF00202; match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF01276; match to pr [...] |
| trd_1582 protein network | https://string-db.org/network/309801.trd_1582 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1583 protein network | https://string-db.org/network/309801.trd_1583 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1584 protein network | https://string-db.org/network/309801.trd_1584 | Conserved hypothetical protein. |
| trd_1585 protein network | https://string-db.org/network/309801.trd_1585 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1587 protein network | https://string-db.org/network/309801.trd_1587 | Thermitase; Identified by match to protein family HMM PF00082. |
| trd_1589 protein network | https://string-db.org/network/309801.trd_1589 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1590 protein network | https://string-db.org/network/309801.trd_1590 | Uncharacterized ACR; COG1565 family; identified by match to protein family HMM PF02636. |
| trd_1591 protein network | https://string-db.org/network/309801.trd_1591 | O-methyltransferase. |
| trd_1592 protein network | https://string-db.org/network/309801.trd_1592 | Glycosyltransferase; Identified by match to protein family HMM PF00535. |
| trd_1593 protein network | https://string-db.org/network/309801.trd_1593 | dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase; Identified by match to protein family HMM PF00535. |
| trd_1594 protein network | https://string-db.org/network/309801.trd_1594 | Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. |
| trd_1595 protein network | https://string-db.org/network/309801.trd_1595 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1596 protein network | https://string-db.org/network/309801.trd_1596 | Conserved hypothetical protein. |
| trd_1597 protein network | https://string-db.org/network/309801.trd_1597 | Hypothetical membrane spanning protein. |
| trd_1598 protein network | https://string-db.org/network/309801.trd_1598 | Putative hemagglutinin/hemolysin-related protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curren [...] |
| trd_1599 protein network | https://string-db.org/network/309801.trd_1599 | Histidine kinase PhoR1; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08448; match to [...] |
| phoP protein network | https://string-db.org/network/309801.trd_1600 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| trd_1601 protein network | https://string-db.org/network/309801.trd_1601 | Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732. |
| trd_1602 protein network | https://string-db.org/network/309801.trd_1602 | Mannose-1-phosphate guanylyltransferase (GDP); Identified by match to protein family HMM PF00483. |
| topA protein network | https://string-db.org/network/309801.trd_1603 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...] |
| hslV protein network | https://string-db.org/network/309801.trd_1604 | Heat shock protein HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. |
| hslU protein network | https://string-db.org/network/309801.trd_1605 | Heat shock protein HslVU, ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. |
| trd_1606 protein network | https://string-db.org/network/309801.trd_1606 | Dolichyl-phosphate mannose synthase related protein; Identified by match to protein family HMM PF00535. |
| trd_1607 protein network | https://string-db.org/network/309801.trd_1607 | Transcriptional repressor; Identified by match to protein family HMM PF00480. |
| trd_1608 protein network | https://string-db.org/network/309801.trd_1608 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1609 protein network | https://string-db.org/network/309801.trd_1609 | Putative dipeptide ABC transporter dipeptide-binding protein; Identified by match to protein family HMM PF00496. |
| ilvE protein network | https://string-db.org/network/309801.trd_1610 | Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. |
| trd_1611 protein network | https://string-db.org/network/309801.trd_1611 | Glutamate-1-semialdehyde 2,1-aminomutase; Identified by match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. |
| trd_1612 protein network | https://string-db.org/network/309801.trd_1612 | 1-aminocyclopropane-1-carboxylate deaminase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR01275. |
| priA protein network | https://string-db.org/network/309801.trd_1613 | Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...] |
| def protein network | https://string-db.org/network/309801.trd_1614 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...] |
| gmk protein network | https://string-db.org/network/309801.trd_1615 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. |
| trd_1616 protein network | https://string-db.org/network/309801.trd_1616 | Putative fibronectin-binding protein; Identified by match to protein family HMM PF05670; match to protein family HMM PF05833. |
| tatC protein network | https://string-db.org/network/309801.trd_1617 | Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their sign [...] |
| acpP protein network | https://string-db.org/network/309801.trd_1618 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. |
| nusB protein network | https://string-db.org/network/309801.trd_1619 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator seque [...] |
| accC protein network | https://string-db.org/network/309801.trd_1620 | acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein [...] |
| fabG protein network | https://string-db.org/network/309801.trd_1621 | 3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...] |
| fabD protein network | https://string-db.org/network/309801.trd_1622 | Malonyl CoA-acyl carrier protein transacylase; Identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128. |
| fabH protein network | https://string-db.org/network/309801.trd_1623 | 3-oxoacyl-[acyl-carrier-protein] synthase III protein 1; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes [...] |
| rpmF protein network | https://string-db.org/network/309801.trd_1624 | Hypothetical protein; Identified by glimmer; putative; Belongs to the bacterial ribosomal protein bL32 family. |
| trd_1625 protein network | https://string-db.org/network/309801.trd_1625 | Uncharacterized ACR; COG1399; identified by match to protein family HMM PF02620. |
| trd_1626 protein network | https://string-db.org/network/309801.trd_1626 | 2-dehydro-3-deoxyglucarate aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family. |
| ilvE-2 protein network | https://string-db.org/network/309801.trd_1627 | Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. |
| trd_1628 protein network | https://string-db.org/network/309801.trd_1628 | Identified by match to protein family HMM PF00496. |
| trd_1629 protein network | https://string-db.org/network/309801.trd_1629 | Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the AB [...] |
| trd_1630 protein network | https://string-db.org/network/309801.trd_1630 | Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the AB [...] |
| trd_1631 protein network | https://string-db.org/network/309801.trd_1631 | Metal-dependent protease; Identified by match to protein family HMM PF02163. |
| scpA protein network | https://string-db.org/network/309801.trd_1632 | Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA awa [...] |
| scpB protein network | https://string-db.org/network/309801.trd_1633 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA awa [...] |
| iscS protein network | https://string-db.org/network/309801.trd_1634 | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental [...] |
| trd_1635 protein network | https://string-db.org/network/309801.trd_1635 | Transcriptional regulator superfamily; Identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738. |
| prfB protein network | https://string-db.org/network/309801.trd_1636 | Peptide chain release factor 2, programmed frameshift; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. |
| trd_1637 protein network | https://string-db.org/network/309801.trd_1637 | Hypothetical protein; Identified by glimmer; putative. |
| hrcA protein network | https://string-db.org/network/309801.trd_1638 | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. |
| grpE protein network | https://string-db.org/network/309801.trd_1639 | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...] |
| dnaK protein network | https://string-db.org/network/309801.trd_1640 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. |
| trd_1641 protein network | https://string-db.org/network/309801.trd_1641 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1642 protein network | https://string-db.org/network/309801.trd_1642 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_1643 protein network | https://string-db.org/network/309801.trd_1643 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_1644 protein network | https://string-db.org/network/309801.trd_1644 | Putative phage structural protein. |
| trd_1645 protein network | https://string-db.org/network/309801.trd_1645 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1646 protein network | https://string-db.org/network/309801.trd_1646 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1647 protein network | https://string-db.org/network/309801.trd_1647 | N-acetylmuramoyl-L-alanine amidase, family 2; Identified by match to protein family HMM PF01510. |
| trd_1648 protein network | https://string-db.org/network/309801.trd_1648 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1654 protein network | https://string-db.org/network/309801.trd_1654 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1655 protein network | https://string-db.org/network/309801.trd_1655 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1656 protein network | https://string-db.org/network/309801.trd_1656 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1657 protein network | https://string-db.org/network/309801.trd_1657 | Putative helix-turn-helix, Fis-type; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| trd_1658 protein network | https://string-db.org/network/309801.trd_1658 | Putative S-layer associated protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| trd_1659 protein network | https://string-db.org/network/309801.trd_1659 | Glycerophosphoryl diester phosphodiesterase; Identified by match to protein family HMM PF03009. |
| trd_1660 protein network | https://string-db.org/network/309801.trd_1660 | GAF domain protein; Identified by match to protein family HMM PF01590. |
| trd_1661 protein network | https://string-db.org/network/309801.trd_1661 | Membrane-associated phospholipid phosphatase; Identified by match to protein family HMM PF01569. |
| ispH-2 protein network | https://string-db.org/network/309801.trd_1662 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...] |
| trd_1663 protein network | https://string-db.org/network/309801.trd_1663 | Hydrolase, HAD superfamily; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. |
| rfbD protein network | https://string-db.org/network/309801.trd_1664 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. |
| trd_1665 protein network | https://string-db.org/network/309801.trd_1665 | Hypothetical protein; Identified by glimmer; putative; Belongs to the glycosyl hydrolase 5 (cellulase A) family. |
| nfo protein network | https://string-db.org/network/309801.trd_1666 | Probable endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyr [...] |
| trd_1667 protein network | https://string-db.org/network/309801.trd_1667 | Putative sensor kinase; Identified by match to protein family HMM PF02518; match to protein family HMM PF07730. |
| hexB protein network | https://string-db.org/network/309801.trd_1668 | DNA mismatch repair protein HexB; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...] |
| trd_1669 protein network | https://string-db.org/network/309801.trd_1669 | Transcriptional regulatory protein degU; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08279. |
| trd_1670 protein network | https://string-db.org/network/309801.trd_1670 | RDD family protein; Identified by match to protein family HMM PF06271. |
| trd_1671 protein network | https://string-db.org/network/309801.trd_1671 | Putative periplasmic dipeptide transport substrate-binding protein; Identified by match to protein family HMM PF00496. |
| trd_1672 protein network | https://string-db.org/network/309801.trd_1672 | Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| trd_1673 protein network | https://string-db.org/network/309801.trd_1673 | ABC transporter, membrane spanning protein (dipeptide); Identified by match to protein family HMM PF00528. |
| trd_1674 protein network | https://string-db.org/network/309801.trd_1674 | Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528. |
| trd_1675 protein network | https://string-db.org/network/309801.trd_1675 | Inner membrane ABC transporter permease protein ycjP; Identified by match to protein family HMM PF00528. |
| trd_1676 protein network | https://string-db.org/network/309801.trd_1676 | Putative Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. |
| trd_1677 protein network | https://string-db.org/network/309801.trd_1677 | Putative groEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family. |
| trd_1678 protein network | https://string-db.org/network/309801.trd_1678 | BNR/Asp-box repeat domain protein; Identified by match to protein family HMM PF02012. |
| queF protein network | https://string-db.org/network/309801.trd_1679 | GTP cyclohydrolase family protein; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. [...] |
| trd_1680 protein network | https://string-db.org/network/309801.trd_1680 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1681 protein network | https://string-db.org/network/309801.trd_1681 | Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein; Identified by match to protein family HMM PF00391. |
| accB protein network | https://string-db.org/network/309801.trd_1682 | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...] |
| trd_1683 protein network | https://string-db.org/network/309801.trd_1683 | Pyruvate carboxylase subunit B; Identified by match to protein family HMM PF00682. |
| trd_1684 protein network | https://string-db.org/network/309801.trd_1684 | Sugar phosphatase of the HAD superfamily; Identified by match to protein family HMM PF00702. |
| trd_1685 protein network | https://string-db.org/network/309801.trd_1685 | Putative phenylacetate-CoA ligase. |
| trd_1687 protein network | https://string-db.org/network/309801.trd_1687 | Lipase; Identified by match to protein family HMM PF07859. |
| trd_1688 protein network | https://string-db.org/network/309801.trd_1688 | Catalytic LigB subunit of aromatic ring-opening dioxygenase superfamily; Identified by match to protein family HMM PF02900. |
| trd_1689 protein network | https://string-db.org/network/309801.trd_1689 | Conserved hypothetical protein. |
| leuA protein network | https://string-db.org/network/309801.trd_1690 | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isoprop [...] |
| leuC protein network | https://string-db.org/network/309801.trd_1691 | 3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. |
| leuD protein network | https://string-db.org/network/309801.trd_1692 | 3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. Le [...] |
| leuB protein network | https://string-db.org/network/309801.trd_1693 | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-met [...] |
| trd_1694 protein network | https://string-db.org/network/309801.trd_1694 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1695 protein network | https://string-db.org/network/309801.trd_1695 | Spore peptidoglycan hydrolase; Identified by match to protein family HMM PF00704. |
| aroQ protein network | https://string-db.org/network/309801.trd_1696 | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. |
| trd_1697 protein network | https://string-db.org/network/309801.trd_1697 | PepQ; Identified by match to protein family HMM PF00557; match to protein family HMM PF01321; Belongs to the peptidase M24B family. |
| efp protein network | https://string-db.org/network/309801.trd_1698 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...] |
| accB-2 protein network | https://string-db.org/network/309801.trd_1699 | acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the car [...] |
| xseA protein network | https://string-db.org/network/309801.trd_1700 | Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...] |
| xseB protein network | https://string-db.org/network/309801.trd_1701 | Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...] |
| trd_1702 protein network | https://string-db.org/network/309801.trd_1702 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1703 protein network | https://string-db.org/network/309801.trd_1703 | Serine proteinase; Identified by match to protein family HMM PF00082; match to protein family HMM PF05922; Belongs to the peptidase S8 family. |
| trd_1704 protein network | https://string-db.org/network/309801.trd_1704 | Conserved hypothetical protein. |
| trd_1705 protein network | https://string-db.org/network/309801.trd_1705 | Hypothetical transcriptional regulator; Identified by match to protein family HMM PF01047. |
| trd_1707 protein network | https://string-db.org/network/309801.trd_1707 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1708 protein network | https://string-db.org/network/309801.trd_1708 | Molybdenum cofactor biosynthesis protein D/E; Identified by match to protein family HMM PF02391; match to protein family HMM PF02597; match to protein family HMM TIGR01682; match to protein famil [...] |
| trd_1709 protein network | https://string-db.org/network/309801.trd_1709 | Putative molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. |
| trd_1710 protein network | https://string-db.org/network/309801.trd_1710 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1711 protein network | https://string-db.org/network/309801.trd_1711 | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to chan [...] |
| obg protein network | https://string-db.org/network/309801.trd_1712 | Putative GTPase of unknown function subfamily; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydr [...] |
| sigA-2 protein network | https://string-db.org/network/309801.trd_1713 | RNA polymerase sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is [...] |
| lysA protein network | https://string-db.org/network/309801.trd_1714 | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. |
| trd_1715 protein network | https://string-db.org/network/309801.trd_1715 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. |
| coaE protein network | https://string-db.org/network/309801.trd_1716 | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. |
| trd_1717 protein network | https://string-db.org/network/309801.trd_1717 | Glutamine amidotransferase, class II/dipeptidase; Identified by match to protein family HMM PF01244. |
| trd_1718 protein network | https://string-db.org/network/309801.trd_1718 | Srebp protease/cbs domain; Identified by match to protein family HMM PF00571; match to protein family HMM PF02163; Belongs to the peptidase M50B family. |
| trd_1719 protein network | https://string-db.org/network/309801.trd_1719 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1720 protein network | https://string-db.org/network/309801.trd_1720 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1721 protein network | https://string-db.org/network/309801.trd_1721 | Hypothetical protein; Identified by glimmer; putative. |
| dtd protein network | https://string-db.org/network/309801.trd_1722 | D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischar [...] |
| ispF protein network | https://string-db.org/network/309801.trd_1723 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...] |
| ispD protein network | https://string-db.org/network/309801.trd_1724 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). |
| trd_1725 protein network | https://string-db.org/network/309801.trd_1725 | Nucleotide binding protein, PINc; Identified by match to protein family HMM PF01850; match to protein family HMM PF01938. |
| trd_1726 protein network | https://string-db.org/network/309801.trd_1726 | Putative PHP domain; Identified by match to protein family HMM PF02811. |
| trd_1727 protein network | https://string-db.org/network/309801.trd_1727 | spoVS-related protein. |
| pyk protein network | https://string-db.org/network/309801.trd_1728 | Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family. |
| trd_1729 protein network | https://string-db.org/network/309801.trd_1729 | Alchohol dehydrogenase; Similar to chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution; an automated process has ident [...] |
| trd_1730 protein network | https://string-db.org/network/309801.trd_1730 | Zinc-dependent alcohol dehydrogenase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| trd_1732 protein network | https://string-db.org/network/309801.trd_1732 | Similar to A. fulgidus predicted coding region; identified by match to protein family HMM PF04008. |
| pdhA protein network | https://string-db.org/network/309801.trd_1733 | TPP-dependent acetoin dehydrogenase alpha-subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). |
| trd_1734 protein network | https://string-db.org/network/309801.trd_1734 | Pyruvate dehydrogenase E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. |
| aceF protein network | https://string-db.org/network/309801.trd_1735 | Pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family H [...] |
| trd_1736 protein network | https://string-db.org/network/309801.trd_1736 | Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be [...] |
| trd_1737 protein network | https://string-db.org/network/309801.trd_1737 | Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1738 protein network | https://string-db.org/network/309801.trd_1738 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1739 protein network | https://string-db.org/network/309801.trd_1739 | Conserved hypothetical protein. |
| uvrA protein network | https://string-db.org/network/309801.trd_1740 | Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...] |
| trd_1741 protein network | https://string-db.org/network/309801.trd_1741 | Putative endonuclease; Identified by match to protein family HMM PF01844. |
| serS protein network | https://string-db.org/network/309801.trd_1742 | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...] |
| trd_1743 protein network | https://string-db.org/network/309801.trd_1743 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1744 protein network | https://string-db.org/network/309801.trd_1744 | Prokaryotic protein of unknown function (DUF849); Identified by match to protein family HMM PF05853. |
| trd_1745 protein network | https://string-db.org/network/309801.trd_1745 | MlrC C-terminus family; Identified by match to protein family HMM PF07171; match to protein family HMM PF07364. |
| smc protein network | https://string-db.org/network/309801.trd_1746 | Putative chromosome segregation protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. |
| galE protein network | https://string-db.org/network/309801.trd_1747 | UDP-glucose 4-epimerase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to [...] |
| ppa protein network | https://string-db.org/network/309801.trd_1748 | Inorganic pyrophosphatase; Identified by match to protein family HMM PF00719. |
| trd_1749 protein network | https://string-db.org/network/309801.trd_1749 | Thiosulfate sulfurtransferase; Identified by match to protein family HMM PF00581. |
| trd_1750 protein network | https://string-db.org/network/309801.trd_1750 | Putative periplasmic immunogenic protein; Identified by match to protein family HMM PF04402. |
| trd_1751 protein network | https://string-db.org/network/309801.trd_1751 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1752 protein network | https://string-db.org/network/309801.trd_1752 | RNA polymerase sigma-H factor; Identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; [...] |
| trd_1753 protein network | https://string-db.org/network/309801.trd_1753 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1754 protein network | https://string-db.org/network/309801.trd_1754 | Putative two-component system response regulator; Identified by match to protein family HMM PF00196. |
| trd_1755 protein network | https://string-db.org/network/309801.trd_1755 | Septum formation initiator family; Identified by match to protein family HMM PF04977. |
| gatA protein network | https://string-db.org/network/309801.trd_1756 | glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-t [...] |
| gatC protein network | https://string-db.org/network/309801.trd_1757 | glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...] |
| trd_1758 protein network | https://string-db.org/network/309801.trd_1758 | Identified by match to protein family HMM PF00232. |
| dnaX protein network | https://string-db.org/network/309801.trd_1759 | DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' [...] |
| rsmI protein network | https://string-db.org/network/309801.trd_1760 | Conserved hypothetical protein TIGR00096; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. |
| trd_1761 protein network | https://string-db.org/network/309801.trd_1761 | L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. |
| fad protein network | https://string-db.org/network/309801.trd_1762 | enoyl-CoA hydratase; Identified by match to protein family HMM PF00378. |
| trd_1763 protein network | https://string-db.org/network/309801.trd_1763 | Hypothetical conserved protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1764 protein network | https://string-db.org/network/309801.trd_1764 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1765 protein network | https://string-db.org/network/309801.trd_1765 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1766 protein network | https://string-db.org/network/309801.trd_1766 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1767 protein network | https://string-db.org/network/309801.trd_1767 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. |
| trd_1768 protein network | https://string-db.org/network/309801.trd_1768 | Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588. |
| trd_1769 protein network | https://string-db.org/network/309801.trd_1769 | Hypothetical protein; Identified by glimmer; putative. |
| ndk protein network | https://string-db.org/network/309801.trd_1770 | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...] |
| trd_1771 protein network | https://string-db.org/network/309801.trd_1771 | Tetratricopeptide repeat family. |
| trd_1773 protein network | https://string-db.org/network/309801.trd_1773 | Sarcosine oxidase; Identified by match to protein family HMM PF01266. |
| trd_1774 protein network | https://string-db.org/network/309801.trd_1774 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1775 protein network | https://string-db.org/network/309801.trd_1775 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1776 protein network | https://string-db.org/network/309801.trd_1776 | Metal-transporting P-type ATPase; Identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01 [...] |
| trd_1777 protein network | https://string-db.org/network/309801.trd_1777 | Phosphoglycerate dehydrogenase SerA; Identified by match to protein family HMM PF00389; match to protein family HMM PF01842; match to protein family HMM PF02826; match to protein family HMM PF034 [...] |
| trd_1778 protein network | https://string-db.org/network/309801.trd_1778 | Putative mannosyl transferase; Identified by match to protein family HMM PF00534; match to protein family HMM TIGR02149. |
| trd_1779 protein network | https://string-db.org/network/309801.trd_1779 | Hypothetical protein; Identified by glimmer; putative. |
| nuoA protein network | https://string-db.org/network/309801.trd_1780 | Nadh ubiquinone oxidoreductase chain a; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the e [...] |
| nuoB protein network | https://string-db.org/network/309801.trd_1781 | Nadh dehydrogenase i, b subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...] |
| nuoC protein network | https://string-db.org/network/309801.trd_1782 | Nadh-quinone oxidoreductase chain c; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| nuoD protein network | https://string-db.org/network/309801.trd_1783 | NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...] |
| nuoH protein network | https://string-db.org/network/309801.trd_1784 | Nadh-quinone oxidoreductase chain h; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzy [...] |
| trd_1785 protein network | https://string-db.org/network/309801.trd_1785 | Nadh dehydrogenase i chain j; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation [...] |
| nuoK protein network | https://string-db.org/network/309801.trd_1786 | Nadh dehydrogenase subunit 4l; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in [...] |
| trd_1787 protein network | https://string-db.org/network/309801.trd_1787 | Nadh dehydrogenase i chain 5; Identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974. |
| trd_1788 protein network | https://string-db.org/network/309801.trd_1788 | Nadh-quinone oxidoreductase chain m; Identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972. |
| nuoN protein network | https://string-db.org/network/309801.trd_1789 | Nadh dehydrogenase chain n; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in thi [...] |
| trd_1790 protein network | https://string-db.org/network/309801.trd_1790 | Putative acetyltransferase; Identified by match to protein family HMM PF00583. |
| trd_1791 protein network | https://string-db.org/network/309801.trd_1791 | Conserved hypothetical protein. |
| trd_1792 protein network | https://string-db.org/network/309801.trd_1792 | Identified by match to protein family HMM PF00155. |
| trd_1793 protein network | https://string-db.org/network/309801.trd_1793 | alanyl-tRNA synthetase; Identified by match to protein family HMM PF07973. |
| trd_1794 protein network | https://string-db.org/network/309801.trd_1794 | Putative Phosphoribosyl transferase domain; Identified by match to protein family HMM PF00156. |
| rnj protein network | https://string-db.org/network/309801.trd_1795 | Metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or dec [...] |
| trd_1796 protein network | https://string-db.org/network/309801.trd_1796 | Putative cytochrome oxidase assembly protein. |
| trd_1797 protein network | https://string-db.org/network/309801.trd_1797 | Hypothetical protein; Identified by glimmer; putative. |
| queC protein network | https://string-db.org/network/309801.trd_1798 | exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. |
| ychF protein network | https://string-db.org/network/309801.trd_1799 | GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. |
| trd_1800 protein network | https://string-db.org/network/309801.trd_1800 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1801 protein network | https://string-db.org/network/309801.trd_1801 | Putative membrane protein. |
| trd_1802 protein network | https://string-db.org/network/309801.trd_1802 | Class II Aldolase and Adducin N-terminal domain protein; Identified by match to protein family HMM PF00596. |
| sucD protein network | https://string-db.org/network/309801.trd_1803 | succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repre [...] |
| sucC protein network | https://string-db.org/network/309801.trd_1804 | succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus repre [...] |
| trd_1805 protein network | https://string-db.org/network/309801.trd_1805 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1806 protein network | https://string-db.org/network/309801.trd_1806 | 3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. |
| trd_1807 protein network | https://string-db.org/network/309801.trd_1807 | TPP-dependent acetoin dehydrogenase alpha-subunit; Identified by match to protein family HMM PF00676. |
| trd_1808 protein network | https://string-db.org/network/309801.trd_1808 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase beta subunit; Identified by match to protein family HMM PF02779; match to protein family HMM PF02780. |
| trd_1809 protein network | https://string-db.org/network/309801.trd_1809 | Universal stress protein; Identified by match to protein family HMM PF00582. |
| trd_1810 protein network | https://string-db.org/network/309801.trd_1810 | Putative oxidoreductase protein; Identified by match to protein family HMM PF02615; Belongs to the LDH2/MDH2 oxidoreductase family. |
| trd_1811 protein network | https://string-db.org/network/309801.trd_1811 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1812 protein network | https://string-db.org/network/309801.trd_1812 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1813 protein network | https://string-db.org/network/309801.trd_1813 | Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; mat [...] |
| trd_1814 protein network | https://string-db.org/network/309801.trd_1814 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1815 protein network | https://string-db.org/network/309801.trd_1815 | B12-dependent ribonucleoside diphosphate reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA re [...] |
| trd_1816 protein network | https://string-db.org/network/309801.trd_1816 | Response regulator uvrY; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF08281. |
| trd_1817 protein network | https://string-db.org/network/309801.trd_1817 | Probable transmembrane two component system sensor kinase transcription regulator protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein [...] |
| ffh protein network | https://string-db.org/network/309801.trd_1818 | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nasce [...] |
| ftsY protein network | https://string-db.org/network/309801.trd_1819 | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the [...] |
| trd_1820 protein network | https://string-db.org/network/309801.trd_1820 | DNA repair protein radC homolog; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family. |
| trd_1821 protein network | https://string-db.org/network/309801.trd_1821 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1822 protein network | https://string-db.org/network/309801.trd_1822 | N-acetylmuramoyl-L-alanine amidase domain protein; Identified by match to protein family HMM PF01510. |
| trd_1823 protein network | https://string-db.org/network/309801.trd_1823 | Putative membrane protein. |
| trd_1824 protein network | https://string-db.org/network/309801.trd_1824 | Glycosyl hydrolase, family 15; Identified by match to protein family HMM PF00723. |
| trd_1825 protein network | https://string-db.org/network/309801.trd_1825 | Aldehyde dehydrogenase aldh; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family. |
| trd_1826 protein network | https://string-db.org/network/309801.trd_1826 | YCII-related domain superfamily; Identified by match to protein family HMM PF03795. |
| phoU protein network | https://string-db.org/network/309801.trd_1827 | Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake. |
| pstB protein network | https://string-db.org/network/309801.trd_1828 | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the A [...] |
| pstB-2 protein network | https://string-db.org/network/309801.trd_1829 | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the A [...] |
| pstA protein network | https://string-db.org/network/309801.trd_1830 | Phosphate ABC transporter, permease protein PstA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974. |
| pstC protein network | https://string-db.org/network/309801.trd_1831 | Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the memb [...] |
| pstS protein network | https://string-db.org/network/309801.trd_1832 | Phosphate ABC transporter, periplasmic phosphate-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409; match to protein family HMM TIGR02136. |
| trd_1833 protein network | https://string-db.org/network/309801.trd_1833 | Phosphate regulatory protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. |
| trd_1834 protein network | https://string-db.org/network/309801.trd_1834 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1835 protein network | https://string-db.org/network/309801.trd_1835 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1836 protein network | https://string-db.org/network/309801.trd_1836 | N-acetyltransferase, gnat family; Identified by match to protein family HMM PF00583. |
| trd_1837 protein network | https://string-db.org/network/309801.trd_1837 | Protein of unknown function superfamily; Identified by match to protein family HMM PF01904. |
| trd_1838 protein network | https://string-db.org/network/309801.trd_1838 | Type I phosphodiesterase / nucleotide pyrophosphatase superfamily; Identified by match to protein family HMM PF01663. |
| trd_1839 protein network | https://string-db.org/network/309801.trd_1839 | Oligopeptide ABC transpoter oligopeptide-binding protein; Identified by match to protein family HMM PF00496. |
| trd_1840 protein network | https://string-db.org/network/309801.trd_1840 | Dipeptide transport system permease protein dppC; Identified by match to protein family HMM PF00528. |
| trd_1841 protein network | https://string-db.org/network/309801.trd_1841 | Putative transport system permease protein; Identified by match to protein family HMM PF00528. |
| trd_1842 protein network | https://string-db.org/network/309801.trd_1842 | Aut protein; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125. |
| mviN-2 protein network | https://string-db.org/network/309801.trd_1843 | Integral membrane protein MviN; Identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695. |
| trd_1845 protein network | https://string-db.org/network/309801.trd_1845 | Cytosine deaminase; Identified by match to protein family HMM PF07969. |
| trd_1846 protein network | https://string-db.org/network/309801.trd_1846 | Protein of unknown function (DUF820) family; Identified by match to protein family HMM PF05685. |
| trd_1847 protein network | https://string-db.org/network/309801.trd_1847 | Carbon monoxide dehydrogenase large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. |
| trd_1848 protein network | https://string-db.org/network/309801.trd_1848 | Carbon monoxide dehydrogenase large chain; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738. |
| trd_1849 protein network | https://string-db.org/network/309801.trd_1849 | Glycosyl transferase, family 2:Glycosyl transferase, group 1; Identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242. |
| trd_1850 protein network | https://string-db.org/network/309801.trd_1850 | Identified by match to protein family HMM PF00903. |
| trd_1851 protein network | https://string-db.org/network/309801.trd_1851 | Putative peptidase; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343. |
| trd_1852 protein network | https://string-db.org/network/309801.trd_1852 | Glyoxylate reductase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. |
| trd_1853 protein network | https://string-db.org/network/309801.trd_1853 | Putative hydantoinase; Identified by match to protein family HMM PF06032. |
| trd_1854 protein network | https://string-db.org/network/309801.trd_1854 | Putative YGGT family; Identified by match to protein family HMM PF02325. |
| trd_1855 protein network | https://string-db.org/network/309801.trd_1855 | Hydantoinase; Identified by match to protein family HMM PF01968; match to protein family HMM PF05378. |
| trd_1856 protein network | https://string-db.org/network/309801.trd_1856 | Putative membrane protein. |
| trd_1857 protein network | https://string-db.org/network/309801.trd_1857 | Bacterial protein of unknown function (DUF951); Identified by match to protein family HMM PF06107. |
| trd_1858 protein network | https://string-db.org/network/309801.trd_1858 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1859 protein network | https://string-db.org/network/309801.trd_1859 | Transporter, major facilitator family; Identified by match to protein family HMM PF07690. |
| trd_1860 protein network | https://string-db.org/network/309801.trd_1860 | Inner membrane ABC transporter permease protein yddQ; Identified by match to protein family HMM PF00528. |
| trd_1861 protein network | https://string-db.org/network/309801.trd_1861 | Dipeptide transport system permease protein dppB; Identified by match to protein family HMM PF00528. |
| trd_1862 protein network | https://string-db.org/network/309801.trd_1862 | Putative dipeptide ABC transporter; Identified by match to protein family HMM PF00496; match to protein family HMM TIGR01409. |
| hypF protein network | https://string-db.org/network/309801.trd_1863 | [NiFe] hydrogenase maturation protein HypF; Identified by match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HM [...] |
| trd_1864 protein network | https://string-db.org/network/309801.trd_1864 | Glutaredoxin 3; Identified by match to protein family HMM PF00462. |
| trd_1865 protein network | https://string-db.org/network/309801.trd_1865 | Phosphoheptose isomerase. |
| hypE protein network | https://string-db.org/network/309801.trd_1866 | Hydrogenase expression/formation protein HypE; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124. |
| hypD protein network | https://string-db.org/network/309801.trd_1867 | Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075. |
| trd_1868 protein network | https://string-db.org/network/309801.trd_1868 | Hydrogenase maturation factor. |
| hypC protein network | https://string-db.org/network/309801.trd_1869 | Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074. |
| hypB protein network | https://string-db.org/network/309801.trd_1870 | Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073. |
| hypA protein network | https://string-db.org/network/309801.trd_1871 | Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. |
| trd_1872 protein network | https://string-db.org/network/309801.trd_1872 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1873 protein network | https://string-db.org/network/309801.trd_1873 | F420-nonreducing hydrogenase; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072. |
| trd_1874 protein network | https://string-db.org/network/309801.trd_1874 | Conserved hypothetical protein. |
| trd_1875 protein network | https://string-db.org/network/309801.trd_1875 | Conserved hypothetical protein. |
| trd_1876 protein network | https://string-db.org/network/309801.trd_1876 | Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may n [...] |
| trd_1877 protein network | https://string-db.org/network/309801.trd_1877 | Nickel-dependent hydrogenase, large subunit; Identified by match to protein family HMM PF00374. |
| trd_1878 protein network | https://string-db.org/network/309801.trd_1878 | Nickel-dependent hydrogenase, small subunit; Identified by match to protein family HMM PF01058. |
| rny protein network | https://string-db.org/network/309801.trd_1879 | Metal-dependent phosphohydrolase, HD region; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. |
| trd_1880 protein network | https://string-db.org/network/309801.trd_1880 | Conserved hypothetical protein. |
| trd_1881 protein network | https://string-db.org/network/309801.trd_1881 | FHA domain protein; Identified by match to protein family HMM PF00498. |
| trd_1882 protein network | https://string-db.org/network/309801.trd_1882 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1883 protein network | https://string-db.org/network/309801.trd_1883 | Putative multidrug-efflux transporter; Identified by match to protein family HMM PF07690. |
| trd_1884 protein network | https://string-db.org/network/309801.trd_1884 | L-allo-threonine aldolase; Identified by match to protein family HMM PF01212. |
| trd_1885 protein network | https://string-db.org/network/309801.trd_1885 | Identified by match to protein family HMM PF05163. |
| trd_1887 protein network | https://string-db.org/network/309801.trd_1887 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1888 protein network | https://string-db.org/network/309801.trd_1888 | Hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509. |
| gltX protein network | https://string-db.org/network/309801.trd_1890 | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...] |
| trd_1891 protein network | https://string-db.org/network/309801.trd_1891 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1892 protein network | https://string-db.org/network/309801.trd_1892 | Putative glycosyltransferase; Identified by match to protein family HMM PF00534. |
| trd_1893 protein network | https://string-db.org/network/309801.trd_1893 | Luciferase-like monooxygenase superfamily; Identified by match to protein family HMM PF00296. |
| thrC-2 protein network | https://string-db.org/network/309801.trd_1894 | Threonine synthase; Identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260. |
| mutM protein network | https://string-db.org/network/309801.trd_1895 | formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...] |
| trd_1896 protein network | https://string-db.org/network/309801.trd_1896 | Hit family protein; Identified by match to protein family HMM PF01230. |
| trd_1897 protein network | https://string-db.org/network/309801.trd_1897 | BNR/Asp-box repeat domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF02012. |
| trd_1898 protein network | https://string-db.org/network/309801.trd_1898 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1899 protein network | https://string-db.org/network/309801.trd_1899 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1900 protein network | https://string-db.org/network/309801.trd_1900 | Conserved hypothetical protein. |
| trd_1901 protein network | https://string-db.org/network/309801.trd_1901 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1902 protein network | https://string-db.org/network/309801.trd_1902 | Conserved hypothetical protein; Similar to chain A, Crystal Structure Of The Conserved Protein Tt1542 From Thermus Thermophilus Hb8; identified by match to protein family HMM PF02585. |
| trd_1903 protein network | https://string-db.org/network/309801.trd_1903 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1904 protein network | https://string-db.org/network/309801.trd_1904 | Identified by match to protein family HMM PF02416. |
| trd_1905 protein network | https://string-db.org/network/309801.trd_1905 | Trypsin domain protein; Identified by match to protein family HMM PF00089. |
| trd_1906 protein network | https://string-db.org/network/309801.trd_1906 | Putative oxidoreductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659. |
| trd_1907 protein network | https://string-db.org/network/309801.trd_1907 | Developmental regulator MorA; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; mat [...] |
| trd_1908 protein network | https://string-db.org/network/309801.trd_1908 | Putative membrane protein. |
| cysS-2 protein network | https://string-db.org/network/309801.trd_1909 | cysteinyl-tRNA synthetase; Identified by match to protein family HMM PF01406; match to protein family HMM PF09334; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA syn [...] |
| trd_1910 protein network | https://string-db.org/network/309801.trd_1910 | Peroxiredoxin, bacterioferritin comigratory protein homolog; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or [...] |
| trd_1911 protein network | https://string-db.org/network/309801.trd_1911 | Pyridine nucleotide-disulphide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF07992. |
| trd_1912 protein network | https://string-db.org/network/309801.trd_1912 | Bacterioferritin comigratory protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model [...] |
| trd_1913 protein network | https://string-db.org/network/309801.trd_1913 | Hypothetical protein. |
| trd_1914 protein network | https://string-db.org/network/309801.trd_1914 | Putative oxidoreductase. |
| trd_1915 protein network | https://string-db.org/network/309801.trd_1915 | Identified by match to protein family HMM PF00903. |
| trd_1916 protein network | https://string-db.org/network/309801.trd_1916 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1917 protein network | https://string-db.org/network/309801.trd_1917 | Putative haloacid dehalogenase-like hydrolase; Identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family [...] |
| trd_1918 protein network | https://string-db.org/network/309801.trd_1918 | Putative fumarylacetoacetate hydrolase family protein; Identified by match to protein family HMM PF01557. |
| trd_1919 protein network | https://string-db.org/network/309801.trd_1919 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1920 protein network | https://string-db.org/network/309801.trd_1920 | Conserved hypothetical protein. |
| trd_1921 protein network | https://string-db.org/network/309801.trd_1921 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1922 protein network | https://string-db.org/network/309801.trd_1922 | Putative cadherin domain/calx-beta domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the curre [...] |
| trd_1923 protein network | https://string-db.org/network/309801.trd_1923 | methylmalonyl-CoA epimerase; Similar to mitochondrial precursor; identified by match to protein family HMM PF00903. |
| trd_1924 protein network | https://string-db.org/network/309801.trd_1924 | Cell division inhibitor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at [...] |
| minD protein network | https://string-db.org/network/309801.trd_1925 | Septum site-determining protein MinD; Identified by match to protein family HMM PF01656; match to protein family HMM TIGR01968. |
| minC protein network | https://string-db.org/network/309801.trd_1926 | Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments tha [...] |
| trd_1927 protein network | https://string-db.org/network/309801.trd_1927 | Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423. |
| trd_1928 protein network | https://string-db.org/network/309801.trd_1928 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1929 protein network | https://string-db.org/network/309801.trd_1929 | Probable phosphoesterase; Identified by match to protein family HMM PF00149. |
| glgE protein network | https://string-db.org/network/309801.trd_1930 | Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved [...] |
| trd_1931 protein network | https://string-db.org/network/309801.trd_1931 | Alpha amylase, catalytic subdomain; Identified by match to protein family HMM PF00128; match to protein family HMM TIGR02456; match to protein family HMM TIGR02457. |
| treY protein network | https://string-db.org/network/309801.trd_1932 | Putative fusion of 4-alpha glucanotransferase and maltooligosyltrehalose synthase; Identified by match to protein family HMM PF02446. |
| glgB protein network | https://string-db.org/network/309801.trd_1933 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains [...] |
| trd_1934 protein network | https://string-db.org/network/309801.trd_1934 | Putative cobyric acid synthase; Identified by match to protein family HMM PF07685. |
| trd_1935 protein network | https://string-db.org/network/309801.trd_1935 | Glycosyl hydrolase, family 57; Identified by match to protein family HMM PF03065. |
| trd_1936 protein network | https://string-db.org/network/309801.trd_1936 | Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353. |
| trd_1937 protein network | https://string-db.org/network/309801.trd_1937 | Rod shape-determining protein; Involved in formation and maintenance of cell shape. |
| trd_1938 protein network | https://string-db.org/network/309801.trd_1938 | Rod shape-determining protein mreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904. |
| trd_1939 protein network | https://string-db.org/network/309801.trd_1939 | Lipoprotein precursor; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551. |
| trd_1940 protein network | https://string-db.org/network/309801.trd_1940 | Conserved hypothetical protein TIGR00147; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147. |
| trd_1941 protein network | https://string-db.org/network/309801.trd_1941 | Hypothetical protein; Similar to BH1952. |
| trd_1942 protein network | https://string-db.org/network/309801.trd_1942 | Probable alcohol dehydrogenase; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. |
| trd_1943 protein network | https://string-db.org/network/309801.trd_1943 | N-acyl-D-aspartate deacylase; Identified by match to protein family HMM PF01979; match to protein family HMM PF07908; match to protein family HMM PF07969. |
| trd_1944 protein network | https://string-db.org/network/309801.trd_1944 | Domain of unknown function protein; Identified by match to protein family HMM PF03737. |
| trd_1945 protein network | https://string-db.org/network/309801.trd_1945 | Mandelate racemase / muconate lactonizing enzyme, N-terminal domain protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746. |
| trd_1946 protein network | https://string-db.org/network/309801.trd_1946 | Senescence marker protein-30 (SMP-30); Identified by match to protein family HMM PF08450. |
| trd_1947 protein network | https://string-db.org/network/309801.trd_1947 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1948 protein network | https://string-db.org/network/309801.trd_1948 | Putative oxidoreductase protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; [...] |
| trd_1950 protein network | https://string-db.org/network/309801.trd_1950 | Maltose ABC transporter, permease; Identified by match to protein family HMM PF00528. |
| trd_1951 protein network | https://string-db.org/network/309801.trd_1951 | Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528. |
| trd_1952 protein network | https://string-db.org/network/309801.trd_1952 | Bacterial extracellular solute-binding proteins, family 5; Identified by match to protein family HMM PF00496. |
| trd_1954 protein network | https://string-db.org/network/309801.trd_1954 | Putative oligopeptide transport atp-binding abc transporter protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; [...] |
| trd_1955 protein network | https://string-db.org/network/309801.trd_1955 | Oligopeptide transport ATP-binding protein appF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC [...] |
| trd_1956 protein network | https://string-db.org/network/309801.trd_1956 | 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746. |
| trd_1957 protein network | https://string-db.org/network/309801.trd_1957 | Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746. |
| dgoA protein network | https://string-db.org/network/309801.trd_1958 | Probable galactonate dehydratase protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746; Belongs to the mandelate racemase/muconate lactonizing enzyme fam [...] |
| trd_1959 protein network | https://string-db.org/network/309801.trd_1959 | Putative lipoprotein. |
| trd_1960 protein network | https://string-db.org/network/309801.trd_1960 | Identified by match to protein family HMM PF03734. |
| trd_1961 protein network | https://string-db.org/network/309801.trd_1961 | Putative peptidase; Identified by match to protein family HMM PF01476. |
| trd_1962 protein network | https://string-db.org/network/309801.trd_1962 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1963 protein network | https://string-db.org/network/309801.trd_1963 | ComE operon protein 3; Identified by match to protein family HMM PF00753. |
| pgsA protein network | https://string-db.org/network/309801.trd_1964 | CDP-diacylglycerol--glycerol-3-phosphate 3 -phosphatidyltransferase (pgsA); Identified by match to protein family HMM PF01066; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. |
| trd_1965 protein network | https://string-db.org/network/309801.trd_1965 | Glycosyl transferase; Identified by match to protein family HMM PF00534. |
| trd_1966 protein network | https://string-db.org/network/309801.trd_1966 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1967 protein network | https://string-db.org/network/309801.trd_1967 | PRC-barrel domain protein; Identified by match to protein family HMM PF05239. |
| trd_1968 protein network | https://string-db.org/network/309801.trd_1968 | Putative penicillin-binding protein 1A; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912. |
| trd_1969 protein network | https://string-db.org/network/309801.trd_1969 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1970 protein network | https://string-db.org/network/309801.trd_1970 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1971 protein network | https://string-db.org/network/309801.trd_1971 | Putative amino acid oxidase; Identified by match to protein family HMM PF01266. |
| trd_1972 protein network | https://string-db.org/network/309801.trd_1972 | Polysulphide reductase, NrfD superfamily; Identified by match to protein family HMM PF03916. |
| trd_1973 protein network | https://string-db.org/network/309801.trd_1973 | Putative [Ni/Fe] hydrogenase, iron-sulfur cluster-binding subunit; Identified by match to protein family HMM PF00037. |
| trd_1974 protein network | https://string-db.org/network/309801.trd_1974 | Formate dehydrogenase, nitrate-inducible, major subunit (selenocysteine-containing); An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 [...] |
| trd_1975 protein network | https://string-db.org/network/309801.trd_1975 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1976 protein network | https://string-db.org/network/309801.trd_1976 | UspA; Identified by match to protein family HMM PF00582. |
| kefB protein network | https://string-db.org/network/309801.trd_1977 | Kef-type K+ transport systems, membrane components; Identified by match to protein family HMM PF00999. |
| trd_1978 protein network | https://string-db.org/network/309801.trd_1978 | Putative HEPN domain; Identified by match to protein family HMM PF05168. |
| trd_1979 protein network | https://string-db.org/network/309801.trd_1979 | Putative Nucleotidyltransferase domain; Identified by match to protein family HMM PF01909. |
| trd_1980 protein network | https://string-db.org/network/309801.trd_1980 | Putative endonuclease/exonuclease/phosphatase family protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended o [...] |
| trd_1981 protein network | https://string-db.org/network/309801.trd_1981 | Hypothetical protein; Identified by glimmer; putative. |
| trd_1982 protein network | https://string-db.org/network/309801.trd_1982 | Mechanosensitive ion channel; Identified by match to protein family HMM PF00924. |