Organism Overview: Anaplasma phagocytophilum


 
polA protein networkhttps://string-db.org/network/212042.APH_0001DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
rpe protein networkhttps://string-db.org/network/212042.APH_0002Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
APH_0003 protein networkhttps://string-db.org/network/212042.APH_0003Putative ABC transporter, permease protein; Identified by similarity to GB:AAS14650.1; match to protein family HMM PF02405.
APH_0004 protein networkhttps://string-db.org/network/212042.APH_0004ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
APH_0005 protein networkhttps://string-db.org/network/212042.APH_0005Hypothetical protein; Identified by Glimmer2; putative.
APH_0006 protein networkhttps://string-db.org/network/212042.APH_0006Es1 family protein; Identified by similarity to SP:P26428; match to protein family HMM PF01965.
metK protein networkhttps://string-db.org/network/212042.APH_0007S-adenosylmethionine synthetase; Identified by similarity to SP:P04384; match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to pro [...]
APH_0009 protein networkhttps://string-db.org/network/212042.APH_0009Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; Identified by match to protein family HMM PF01494; match to protein family HMM TIGR01988.
APH_0011 protein networkhttps://string-db.org/network/212042.APH_0011Hypothetical protein; Identified by Glimmer2; putative.
glyQ-1 protein networkhttps://string-db.org/network/212042.APH_0013glycyl-tRNA synthetase, alpha subunit; Identified by similarity to SP:P00960; match to protein family HMM PF02091; match to protein family HMM TIGR00388.
glyS protein networkhttps://string-db.org/network/212042.APH_0014glycyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211.
dnaJ protein networkhttps://string-db.org/network/212042.APH_0015Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an [...]
nadC protein networkhttps://string-db.org/network/212042.APH_0016Nicotinate-nucleotide pyrophosphorylase; Identified by similarity to SP:P39666; match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; Be [...]
plsY protein networkhttps://string-db.org/network/212042.APH_0017Conserved hypothetical protein TIGR00023; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme u [...]
ruvC protein networkhttps://string-db.org/network/212042.APH_0018Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to st [...]
APH_0019 protein networkhttps://string-db.org/network/212042.APH_0019Cytochrome c oxidase, subunit III; Identified by match to protein family HMM PF00510.
hemE protein networkhttps://string-db.org/network/212042.APH_0020Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
APH_0021 protein networkhttps://string-db.org/network/212042.APH_0021Putative hemolysin; Identified by similarity to SP:Q54318; match to protein family HMM PF00571; match to protein family HMM PF03471.
APH_0022 protein networkhttps://string-db.org/network/212042.APH_0022Phage prohead protease, HK97 family; Identified by similarity to SP:P49860; match to protein family HMM PF04586; match to protein family HMM TIGR01543.
APH_0023 protein networkhttps://string-db.org/network/212042.APH_0023Phage portal protein, HK97 family; Identified by match to protein family HMM PF04860; match to protein family HMM TIGR01537.
APH_0024 protein networkhttps://string-db.org/network/212042.APH_0024Hypothetical protein; Identified by Glimmer2; putative.
APH_0025 protein networkhttps://string-db.org/network/212042.APH_0025Putative biotin synthesis protein BioC; Identified by similarity to SP:P12999.
nadA protein networkhttps://string-db.org/network/212042.APH_0026Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.
fdxA protein networkhttps://string-db.org/network/212042.APH_0027Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
APH_0028 protein networkhttps://string-db.org/network/212042.APH_0028Hypothetical protein; Identified by Glimmer2; putative.
APH_0032 protein networkhttps://string-db.org/network/212042.APH_0032Conserved domain protein.
APH_0033 protein networkhttps://string-db.org/network/212042.APH_0033Hypothetical protein; Identified by Glimmer2; putative.
trpS protein networkhttps://string-db.org/network/212042.APH_0035tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
grpE protein networkhttps://string-db.org/network/212042.APH_0036Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nu [...]
ribD protein networkhttps://string-db.org/network/212042.APH_0037Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-termi [...]
pyrG protein networkhttps://string-db.org/network/212042.APH_0038CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the fo [...]
secG protein networkhttps://string-db.org/network/212042.APH_0039Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
xerD protein networkhttps://string-db.org/network/212042.APH_0040Tyrosine recombinase XerD; Identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
APH_0041 protein networkhttps://string-db.org/network/212042.APH_0041ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
APH_0042 protein networkhttps://string-db.org/network/212042.APH_0042Malate dehydrogenase; Identified by similarity to SP:O30808; match to protein family HMM PF00390; match to protein family HMM PF01515; match to protein family HMM PF03949.
APH_0043 protein networkhttps://string-db.org/network/212042.APH_0043Conserved hypothetical protein; Identified by similarity to GB:AAS14671.1.
APH_0044 protein networkhttps://string-db.org/network/212042.APH_0044Identified by match to protein family HMM PF00361.
APH_0045 protein networkhttps://string-db.org/network/212042.APH_0045Identified by match to protein family HMM PF02470.
APH_0046 protein networkhttps://string-db.org/network/212042.APH_0046Conserved domain protein.
nrdR protein networkhttps://string-db.org/network/212042.APH_0047ATP cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
APH_0050 protein networkhttps://string-db.org/network/212042.APH_0050Hypothetical protein; Identified by Glimmer2; putative.
APH_0051 protein networkhttps://string-db.org/network/212042.APH_0051Iron-binding protein; Identified by similarity to GB:AAD03802.1; match to protein family HMM PF01547.
APH_0052 protein networkhttps://string-db.org/network/212042.APH_0052Conserved hypothetical protein; Identified by similarity to GB:CAC47765.1; match to protein family HMM PF03966; Belongs to the UPF0434 family.
rpsP protein networkhttps://string-db.org/network/212042.APH_0054Ribosomal protein S16; Identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; Belongs to the bacterial ribosomal protein bS16 family.
APH_0056 protein networkhttps://string-db.org/network/212042.APH_0056Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
APH_0057 protein networkhttps://string-db.org/network/212042.APH_0057Hypothetical protein; Identified by Glimmer2; putative.
APH_0058 protein networkhttps://string-db.org/network/212042.APH_0058S-adenosylmethionine synthetase, truncated; Identified by similarity to SP:P04384; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; [...]
pheS protein networkhttps://string-db.org/network/212042.APH_0059phenylalanyl-tRNA synthetase, alpha subunit; Identified by similarity to SP:P08312; match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468 [...]
rplT protein networkhttps://string-db.org/network/212042.APH_0060Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing function [...]
rpmI protein networkhttps://string-db.org/network/212042.APH_0061Ribosomal protein L35; Identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; Belongs to the bacterial ribosomal protein bL35 family.
APH_0062 protein networkhttps://string-db.org/network/212042.APH_0062Conserved hypothetical protein; Identified by similarity to GB:AAL02641.1; match to protein family HMM PF06242.
rho-1 protein networkhttps://string-db.org/network/212042.APH_0064Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
lpdA-1 protein networkhttps://string-db.org/network/212042.APH_0065Dihydrolipoamide dehydrogenase; Identified by similarity to SP:P54533; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to prot [...]
APH_0066 protein networkhttps://string-db.org/network/212042.APH_0066DnaJ domain protein; Identified by match to protein family HMM PF00226.
APH_0067 protein networkhttps://string-db.org/network/212042.APH_0067NifU domain protein; Identified by match to protein family HMM PF01106.
APH_0068 protein networkhttps://string-db.org/network/212042.APH_0068Hypothetical protein; Identified by Glimmer2; putative.
thiS protein networkhttps://string-db.org/network/212042.APH_0069Thiamine biosynthesis protein ThiS; Identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683.
APH_0070 protein networkhttps://string-db.org/network/212042.APH_0070Thiamin biosynthesis ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moie [...]
APH_0071 protein networkhttps://string-db.org/network/212042.APH_0071Conserved hypothetical protein; Identified by similarity to GB:AAL02970.1.
gltX-1 protein networkhttps://string-db.org/network/212042.APH_0072glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
APH_0074 protein networkhttps://string-db.org/network/212042.APH_0074Conserved hypothetical protein; Identified by similarity to GB:AAS14910.1.
APH_0075 protein networkhttps://string-db.org/network/212042.APH_0075Putative methyltransferase; Identified by match to protein family HMM PF03602.
p44-65 protein networkhttps://string-db.org/network/212042.APH_0076P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0077 protein networkhttps://string-db.org/network/212042.APH_0077Auxin efflux carrier family protein; Identified by match to protein family HMM PF03547.
APH_0078 protein networkhttps://string-db.org/network/212042.APH_0078Putative oxidoreductase; Identified by match to protein family HMM PF04800.
xseB protein networkhttps://string-db.org/network/212042.APH_0079Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
trx protein networkhttps://string-db.org/network/212042.APH_0080Thioredoxin; Identified by similarity to SP:P00274; match to protein family HMM PF00085; match to protein family HMM TIGR01068; Belongs to the thioredoxin family.
virB9-2 protein networkhttps://string-db.org/network/212042.APH_0081Type IV secretion system protein VirB9-2; Name change from VirB9-1 to VirB9-2. PMID: 20670295.
pdhA protein networkhttps://string-db.org/network/212042.APH_0082Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
APH_0083 protein networkhttps://string-db.org/network/212042.APH_0083Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
APH_0087 protein networkhttps://string-db.org/network/212042.APH_0087Putative phosphoribosylglycinamide formyltransferase, truncated; Identified by similarity to SP:Q64737; match to protein family HMM PF00551.
guaB protein networkhttps://string-db.org/network/212042.APH_0088Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesi [...]
ppnK protein networkhttps://string-db.org/network/212042.APH_0089ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl [...]
APH_0090 protein networkhttps://string-db.org/network/212042.APH_0090Putative 50S ribosomal protein L31; Identified by similarity to SP:Q03223; Belongs to the bacterial ribosomal protein bL31 family.
APH_0091 protein networkhttps://string-db.org/network/212042.APH_0091Conserved domain protein.
fabD protein networkhttps://string-db.org/network/212042.APH_0092Malonyl CoA-acyl carrier protein transacylase; Identified by similarity to SP:P71019; match to protein family HMM PF00698; match to protein family HMM TIGR00128.
tmk protein networkhttps://string-db.org/network/212042.APH_0093Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
APH_0094 protein networkhttps://string-db.org/network/212042.APH_0094Putative membrane protein; Identified by match to protein family HMM PF07690.
APH_0095 protein networkhttps://string-db.org/network/212042.APH_0095Hypothetical protein; Identified by Glimmer2; putative.
APH_0096 protein networkhttps://string-db.org/network/212042.APH_0096Tim44-like domain protein; Identified by match to protein family HMM PF04280.
secB protein networkhttps://string-db.org/network/212042.APH_0097Protein-export protein SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, [...]
APH_0098 protein networkhttps://string-db.org/network/212042.APH_0098Conserved hypothetical protein; Identified by similarity to GB:AAS14712.1.
APH_0099 protein networkhttps://string-db.org/network/212042.APH_0099Hypothetical protein; Identified by Glimmer2; putative.
APH_0100 protein networkhttps://string-db.org/network/212042.APH_0100Hypothetical protein; Identified by Glimmer2; putative.
APH_0101 protein networkhttps://string-db.org/network/212042.APH_0101Peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193; Belongs to the peptidase M16 family.
APH_0102 protein networkhttps://string-db.org/network/212042.APH_0102Hypothetical protein; Identified by Glimmer2; putative.
APH_0103 protein networkhttps://string-db.org/network/212042.APH_0103Oxidoreductase, 2-nitropropane dioxygenase family; Identified by similarity to GB:AAS13931.1; match to protein family HMM PF03060.
APH_0104 protein networkhttps://string-db.org/network/212042.APH_0104Uridylate kinase, truncated; Identified by similarity to SP:P29464.
ribE protein networkhttps://string-db.org/network/212042.APH_0106Riboflavin synthase, alpha subunit; Identified by similarity to SP:P51961; match to protein family HMM PF00677; match to protein family HMM TIGR00187.
mfd protein networkhttps://string-db.org/network/212042.APH_0107Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated tr [...]
APH_0108 protein networkhttps://string-db.org/network/212042.APH_0108Hypothetical protein; Identified by Glimmer2; putative.
rnhA protein networkhttps://string-db.org/network/212042.APH_0109Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
APH_0110 protein networkhttps://string-db.org/network/212042.APH_0110Acetamidase/formamidase family protein.
pyrH protein networkhttps://string-db.org/network/212042.APH_0111Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
frr protein networkhttps://string-db.org/network/212042.APH_0112Ribosome recycling factor; Identified by similarity to SP:P16174; match to protein family HMM PF01765; match to protein family HMM TIGR00496.
APH_0113 protein networkhttps://string-db.org/network/212042.APH_0113Putative phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
p44-66 protein networkhttps://string-db.org/network/212042.APH_0115P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0116 protein networkhttps://string-db.org/network/212042.APH_0116Hypothetical protein; Identified by Glimmer2; putative.
APH_0117 protein networkhttps://string-db.org/network/212042.APH_0117Hypothetical protein; Identified by Glimmer2; putative.
APH_0118 protein networkhttps://string-db.org/network/212042.APH_0118Hypothetical protein; Identified by Glimmer2; putative.
purC protein networkhttps://string-db.org/network/212042.APH_0119Phosphoribosylaminoimidazole-succinocarboxamide synthase; Identified by similarity to SP:P12046; match to protein family HMM PF01259; match to protein family HMM TIGR00081; Belongs to the SAICAR [...]
hisS protein networkhttps://string-db.org/network/212042.APH_0120histidyl-tRNA synthetase; Identified by similarity to SP:P04804; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.
APH_0121 protein networkhttps://string-db.org/network/212042.APH_0121Hypothetical protein; Identified by Glimmer2; putative.
APH_0122 protein networkhttps://string-db.org/network/212042.APH_0122Thiol:disulfide oxidoreductase; Identified by similarity to GB:AAM22615.1; match to protein family HMM PF01323.
ctaA protein networkhttps://string-db.org/network/212042.APH_0123Putative cytochrome oxidase assembly protein; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
APH_0124 protein networkhttps://string-db.org/network/212042.APH_0124Hypothetical protein; Identified by Glimmer2; putative.
ccmA protein networkhttps://string-db.org/network/212042.APH_0125Heme exporter protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact r [...]
APH_0126 protein networkhttps://string-db.org/network/212042.APH_0126Hypothetical protein; Identified by Glimmer2; putative.
APH_0127 protein networkhttps://string-db.org/network/212042.APH_0127Hypothetical protein; Identified by Glimmer2; putative.
APH_0128 protein networkhttps://string-db.org/network/212042.APH_0128Hypothetical protein; Identified by Glimmer2; putative.
APH_0129 protein networkhttps://string-db.org/network/212042.APH_0129tubulin/FtsZ family, C-terminal domain protein; Identified by match to protein family HMM PF03953.
dcd protein networkhttps://string-db.org/network/212042.APH_0130Putative deoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP.
APH_0131 protein networkhttps://string-db.org/network/212042.APH_0131Conserved domain protein.
p44-21 protein networkhttps://string-db.org/network/212042.APH_0132P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0133 protein networkhttps://string-db.org/network/212042.APH_0133Hypothetical protein; Identified by Glimmer2; putative.
p44-80 protein networkhttps://string-db.org/network/212042.APH_0134P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0135 protein networkhttps://string-db.org/network/212042.APH_0135Cold shock protein, CSD family; Identified by match to protein family HMM PF00313.
ntrY protein networkhttps://string-db.org/network/212042.APH_0136Nitrogen regulation protein/Sensor Histidine Kinase NtrY; Name change according to the cited literature. PMID: 16882029.
APH_0137 protein networkhttps://string-db.org/network/212042.APH_0137Putative ribonuclease D; Identified by similarity to SP:P09155; match to protein family HMM PF01612.
ligA protein networkhttps://string-db.org/network/212042.APH_0138DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as t [...]
APH_0139 protein networkhttps://string-db.org/network/212042.APH_0139Identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; Belongs to the glutaredoxin family. Monothiol subfamily.
APH_0140 protein networkhttps://string-db.org/network/212042.APH_0140Identified by match to protein family HMM PF01722; Belongs to the BolA/IbaG family.
APH_0141 protein networkhttps://string-db.org/network/212042.APH_0141Putative thiol:disulfide oxidoreductase; Identified by similarity to SP:P33926.
p44-87 protein networkhttps://string-db.org/network/212042.APH_0142P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-81 protein networkhttps://string-db.org/network/212042.APH_0143P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-C protein networkhttps://string-db.org/network/212042.APH_0144P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-8 protein networkhttps://string-db.org/network/212042.APH_0145Encodes a full-length P44 outer membrane protein.
p44-N protein networkhttps://string-db.org/network/212042.APH_0146P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0147 protein networkhttps://string-db.org/network/212042.APH_0147Guanylate kinase, truncated; Identified by similarity to SP:P60548.
APH_0149 protein networkhttps://string-db.org/network/212042.APH_0149TRAP transporter, 4TM/12TM fusion protein; Identified by match to protein family HMM PF06808; match to protein family HMM TIGR02123.
APH_0150 protein networkhttps://string-db.org/network/212042.APH_0150Identified by match to protein family HMM PF02674.
rpsF protein networkhttps://string-db.org/network/212042.APH_0151Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
rpsR protein networkhttps://string-db.org/network/212042.APH_0152Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal p [...]
rplI protein networkhttps://string-db.org/network/212042.APH_0153Ribosomal protein L9; Binds to the 23S rRNA.
glyA protein networkhttps://string-db.org/network/212042.APH_0154Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major so [...]
APH_0155 protein networkhttps://string-db.org/network/212042.APH_0155Hypothetical protein; Identified by Glimmer2; putative.
APH_0156 protein networkhttps://string-db.org/network/212042.APH_0156Frataxin-like domain protein; Belongs to the frataxin family.
APH_0157 protein networkhttps://string-db.org/network/212042.APH_0157Putative ABC transporter, ATP-binding protein/permease protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
sdhA-1 protein networkhttps://string-db.org/network/212042.APH_0158Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR018 [...]
sdhB-1 protein networkhttps://string-db.org/network/212042.APH_0159Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384; Belongs to the succinate dehydrogenase/fumarate reductase i [...]
APH_0160 protein networkhttps://string-db.org/network/212042.APH_0160Putative thymidylate synthase, flavin-dependent, truncated; Identified by similarity to GB:AAU03772.1.
sdhA-2 protein networkhttps://string-db.org/network/212042.APH_0161Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR018 [...]
sdhB-2 protein networkhttps://string-db.org/network/212042.APH_0162Succinate dehydrogenase, iron-sulfur protein; Identified by match to protein family HMM PF00111; match to protein family HMM TIGR00384.
thyX protein networkhttps://string-db.org/network/212042.APH_0163Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylene [...]
APH_0164 protein networkhttps://string-db.org/network/212042.APH_0164Bicyclomycin resistance protein; Identified by similarity to SP:P28246; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00710.
glyQ-2 protein networkhttps://string-db.org/network/212042.APH_0165glycyl-tRNA synthetase, alpha subunit; Identified by similarity to SP:P00960; match to protein family HMM PF02091; match to protein family HMM TIGR00388.
ruvB protein networkhttps://string-db.org/network/212042.APH_0166Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ruvA protein networkhttps://string-db.org/network/212042.APH_0167Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand [...]
ccmC protein networkhttps://string-db.org/network/212042.APH_0168Heme exporter protein CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
APH_0169 protein networkhttps://string-db.org/network/212042.APH_0169Hypothetical protein; Identified by Glimmer2; putative.
gmk protein networkhttps://string-db.org/network/212042.APH_0170Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
p44-45 protein networkhttps://string-db.org/network/212042.APH_0171Encodes a full-length P44 outer membrane protein.
p44-C-2 protein networkhttps://string-db.org/network/212042.APH_0172P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0173 protein networkhttps://string-db.org/network/212042.APH_0173Hypothetical protein; Identified by Glimmer2; putative.
p44-55 protein networkhttps://string-db.org/network/212042.APH_0174P44-55 outer membrane protein, silent; Encodes a full-length P44 outer membrane protein.
folD protein networkhttps://string-db.org/network/212042.APH_0175Methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis [...]
APH_0177 protein networkhttps://string-db.org/network/212042.APH_0177Hypothetical protein; Identified by Glimmer2; putative.
APH_0178 protein networkhttps://string-db.org/network/212042.APH_0178Hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.
APH_0179 protein networkhttps://string-db.org/network/212042.APH_0179Conserved hypothetical protein; Identified by similarity to PIR:A71691; match to protein family HMM PF00561.
cycM protein networkhttps://string-db.org/network/212042.APH_0180Cytochrome C, membrane-bound; Identified by similarity to SP:P30323; match to protein family HMM PF00034.
APH_0181 protein networkhttps://string-db.org/network/212042.APH_0181Identified by match to protein family HMM PF00361.
APH_0182 protein networkhttps://string-db.org/network/212042.APH_0182Hypothetical protein; Identified by Glimmer2; putative.
APH_0184 protein networkhttps://string-db.org/network/212042.APH_0184Hypothetical protein; Identified by Glimmer2; putative.
ppdK protein networkhttps://string-db.org/network/212042.APH_0185Pyruvate, phosphate dikinase; Identified by similarity to SP:P22983; match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protei [...]
APH_0186 protein networkhttps://string-db.org/network/212042.APH_0186Hypothetical protein; Identified by Glimmer2; putative.
APH_0187 protein networkhttps://string-db.org/network/212042.APH_0187HAD-superfamily hydrolase, subfamily IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549.
APH_0188 protein networkhttps://string-db.org/network/212042.APH_0188Hypothetical protein; Identified by Glimmer2; putative.
APH_0189 protein networkhttps://string-db.org/network/212042.APH_0189Hypothetical protein; Identified by Glimmer2; putative.
aspS protein networkhttps://string-db.org/network/212042.APH_0190aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: [...]
APH_0191 protein networkhttps://string-db.org/network/212042.APH_0191Hypothetical protein; Identified by Glimmer2; putative.
APH_0192 protein networkhttps://string-db.org/network/212042.APH_0192Putative osmotically inducible protein; Identified by similarity to SP:P27291; match to protein family HMM PF04972.
gshB protein networkhttps://string-db.org/network/212042.APH_0193Glutathione synthetase; Identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM TIGR01380; Belongs to the prokaryotic GSH synthase family.
APH_0194 protein networkhttps://string-db.org/network/212042.APH_0194Hypothetical protein; Identified by Glimmer2; putative.
APH_0195 protein networkhttps://string-db.org/network/212042.APH_0195Cell division protein FtsQ; Identified by match to protein family HMM PF03799.
ntrX protein networkhttps://string-db.org/network/212042.APH_0196Response Regulator NtrX, putative nitrogen assimilation regulatory protein; Name change according to the cited literature. PMID: 16882029.
APH_0197 protein networkhttps://string-db.org/network/212042.APH_0197Hypothetical protein; Identified by Glimmer2; putative.
gpsA protein networkhttps://string-db.org/network/212042.APH_0198Glycerol-3-phosphate dehydrogenase (NAD(P)+); Identified by similarity to SP:P37606; match to protein family HMM PF01210; match to protein family HMM PF03807; match to protein family HMM PF07479; [...]
xerC protein networkhttps://string-db.org/network/212042.APH_0200Tyrosine recombinase XerC; Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family.
purM-1 protein networkhttps://string-db.org/network/212042.APH_0202Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.
APH_0203 protein networkhttps://string-db.org/network/212042.APH_0203Hypothetical protein; Identified by Glimmer2; putative.
APH_0204 protein networkhttps://string-db.org/network/212042.APH_0204Hypothetical protein; Identified by Glimmer2; putative.
APH_0206 protein networkhttps://string-db.org/network/212042.APH_0206Conserved hypothetical protein; Identified by similarity to GB:AAS13843.1.
rsfS protein networkhttps://string-db.org/network/212042.APH_0207Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50 [...]
APH_0208 protein networkhttps://string-db.org/network/212042.APH_0208Peptidase, M48 family; Identified by match to protein family HMM PF01435; match to protein family HMM PF07719.
APH_0209 protein networkhttps://string-db.org/network/212042.APH_0209Conserved hypothetical protein; Identified by similarity to GB:AAL08839.1.
purM-2 protein networkhttps://string-db.org/network/212042.APH_0210Phosphoribosylformylglycinamidine cyclo-ligase; Identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878.
APH_0211 protein networkhttps://string-db.org/network/212042.APH_0211Phosphoribosylformylglycinamidine synthase domain protein; Identified by similarity to SP:P15254.
folK protein networkhttps://string-db.org/network/212042.APH_02122-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Identified by similarity to SP:P29252; match to protein family HMM PF01288; match to protein family HMM TIGR01498.
purL protein networkhttps://string-db.org/network/212042.APH_0213Putative phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent co [...]
APH_0215 protein networkhttps://string-db.org/network/212042.APH_0215Hypothetical protein; Identified by Glimmer2; putative.
APH_0217 protein networkhttps://string-db.org/network/212042.APH_0217Hypothetical protein; Identified by Glimmer2; putative.
bioB protein networkhttps://string-db.org/network/212042.APH_0218Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily [...]
APH_0219 protein networkhttps://string-db.org/network/212042.APH_0219Hypothetical protein; Identified by Glimmer2; putative.
APH_0220 protein networkhttps://string-db.org/network/212042.APH_0220Conserved hypothetical protein; Identified by similarity to GB:AAS14547.1.
APH_0221 protein networkhttps://string-db.org/network/212042.APH_0221Putative lipoprotein NlpD; Identified by similarity to SP:P33648; match to protein family HMM PF01551.
glpX protein networkhttps://string-db.org/network/212042.APH_0222Fructose-1,6-bisphosphatase, class II; Identified by match to protein family HMM PF03320; match to protein family HMM TIGR00330.
mnmG protein networkhttps://string-db.org/network/212042.APH_0224Pyridine nucleotide-disulfide oxidoreductase; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-c [...]
APH_0225 protein networkhttps://string-db.org/network/212042.APH_0225Putative phosphoribosylformylglycinamidine synthase I; Identified by similarity to SP:P15254.
p44-68 protein networkhttps://string-db.org/network/212042.APH_0229Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
purN protein networkhttps://string-db.org/network/212042.APH_0230Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylg [...]
pepA protein networkhttps://string-db.org/network/212042.APH_0231Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
APH_0232 protein networkhttps://string-db.org/network/212042.APH_0232Dioxygenase family protein; Identified by similarity to SP:P15110; match to protein family HMM PF00775.
APH_0233 protein networkhttps://string-db.org/network/212042.APH_0233Hypothetical protein; Identified by Glimmer2; putative.
clpB protein networkhttps://string-db.org/network/212042.APH_0235ATP-dependent chaperone protein ClpB; Identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; Belongs [...]
APH_0236 protein networkhttps://string-db.org/network/212042.APH_0236Oxidoreductase, short chain dehydrogenase/reductase family; Identified by match to protein family HMM PF00106.
APH_0237 protein networkhttps://string-db.org/network/212042.APH_0237Hypothetical protein; Identified by Glimmer2; putative.
APH_0238 protein networkhttps://string-db.org/network/212042.APH_0238Hypothetical protein; Identified by Glimmer2; putative.
APH_0239 protein networkhttps://string-db.org/network/212042.APH_0239Hypothetical protein; Identified by Glimmer2; putative.
groL protein networkhttps://string-db.org/network/212042.APH_024060 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
groS protein networkhttps://string-db.org/network/212042.APH_024110 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
radC protein networkhttps://string-db.org/network/212042.APH_0242DNA repair protein RadC; Identified by similarity to SP:P25531; match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.
lipB protein networkhttps://string-db.org/network/212042.APH_0243Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can al [...]
APH_0244 protein networkhttps://string-db.org/network/212042.APH_0244Hypothetical protein; Identified by Glimmer2; putative.
pyrC protein networkhttps://string-db.org/network/212042.APH_0245Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family [...]
APH_0246 protein networkhttps://string-db.org/network/212042.APH_0246DNA / pantothenate metabolism flavoprotein family protein; Identified by similarity to SP:P24285; match to protein family HMM PF04127.
fumC protein networkhttps://string-db.org/network/212042.APH_0247Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamil [...]
APH_0248 protein networkhttps://string-db.org/network/212042.APH_0248Hypothetical protein; Identified by Glimmer2; putative.
carB protein networkhttps://string-db.org/network/212042.APH_0249Carbamoyl-phosphate synthase, large subunit; Identified by similarity to SP:P00968; match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02786; [...]
APH_0250 protein networkhttps://string-db.org/network/212042.APH_0250valyl-tRNA synthetase, truncated; Identified by similarity to SP:O26861.
APH_0253 protein networkhttps://string-db.org/network/212042.APH_0253Hypothetical protein; Identified by Glimmer2; putative.
folP protein networkhttps://string-db.org/network/212042.APH_0254Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate [...]
APH_0255 protein networkhttps://string-db.org/network/212042.APH_0255Hypothetical protein; Identified by Glimmer2; putative.
APH_0256 protein networkhttps://string-db.org/network/212042.APH_0256Type I secretion system ATPase/hypothetical protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01842.
qor protein networkhttps://string-db.org/network/212042.APH_0257Quinone oxidoreductase; Identified by similarity to SP:P28304; match to protein family HMM PF00107.
APH_0258 protein networkhttps://string-db.org/network/212042.APH_0258ATP-dependent DNA helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580.
APH_0259 protein networkhttps://string-db.org/network/212042.APH_0259Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
APH_0260 protein networkhttps://string-db.org/network/212042.APH_0260SPFH domain/band 7 family protein; Identified by match to protein family HMM PF01145.
hemH protein networkhttps://string-db.org/network/212042.APH_0263Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
APH_0264 protein networkhttps://string-db.org/network/212042.APH_0264Hypothetical protein; Identified by Glimmer2; putative.
APH_0265 protein networkhttps://string-db.org/network/212042.APH_0265Hypothetical protein; Identified by Glimmer2; putative.
APH_0266 protein networkhttps://string-db.org/network/212042.APH_0266Conserved hypothetical protein; Identified by similarity to GB:AAS14743.1.
APH_0267 protein networkhttps://string-db.org/network/212042.APH_0267Conserved hypothetical protein; Identified by similarity to GB:BAB50572.1.
APH_0268 protein networkhttps://string-db.org/network/212042.APH_0268Transketolase, thiamine diphosphate binding domain, N-terminal fragment; Matched to N-terminus of full length Tkt (660 aa). Peptides match to this protein was detected in human HL-60 cells by glo [...]
APH_0269 protein networkhttps://string-db.org/network/212042.APH_0269Hypothetical protein; Identified by Glimmer2; putative.
APH_0270 protein networkhttps://string-db.org/network/212042.APH_0270Hypothetical protein; Identified by Glimmer2; putative.
ihfB protein networkhttps://string-db.org/network/212042.APH_0271Integration host factor, beta subunit; Identified by similarity to SP:Q06607; match to protein family HMM PF00216.
sppA protein networkhttps://string-db.org/network/212042.APH_0272Signal peptide peptidase SppA, 36K type; Identified by match to protein family HMM PF01343; match to protein family HMM TIGR00706.
rpsA protein networkhttps://string-db.org/network/212042.APH_0273Ribosomal protein S1; Identified by similarity to SP:P02349; match to protein family HMM PF00575.
cmkB protein networkhttps://string-db.org/network/212042.APH_0274Cytidylate monophosphate kinase; Identified by match to protein family HMM PF02224.
APH_0275 protein networkhttps://string-db.org/network/212042.APH_0275RNA methyltransferase, TrmH family, group 3; Identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; Belongs to the class IV [...]
tuf-1 protein networkhttps://string-db.org/network/212042.APH_0278Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
rpsJ protein networkhttps://string-db.org/network/212042.APH_0279Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
rplC protein networkhttps://string-db.org/network/212042.APH_0280Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosom [...]
rplD protein networkhttps://string-db.org/network/212042.APH_0281Ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes mul [...]
rplW protein networkhttps://string-db.org/network/212042.APH_0282Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking [...]
rplB protein networkhttps://string-db.org/network/212042.APH_0283Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has [...]
rpsS protein networkhttps://string-db.org/network/212042.APH_0284Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
rplV protein networkhttps://string-db.org/network/212042.APH_0285Ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S as [...]
rpsC protein networkhttps://string-db.org/network/212042.APH_0286Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
rplP protein networkhttps://string-db.org/network/212042.APH_0287Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
rpmC protein networkhttps://string-db.org/network/212042.APH_0288Ribosomal protein L29; Identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; Belongs to the universal ribosomal protein uL29 family.
rpsQ protein networkhttps://string-db.org/network/212042.APH_0289Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
rplN protein networkhttps://string-db.org/network/212042.APH_0290Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
rplX protein networkhttps://string-db.org/network/212042.APH_0291Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.
rplE protein networkhttps://string-db.org/network/212042.APH_0292Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In [...]
rpsN protein networkhttps://string-db.org/network/212042.APH_0293Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the [...]
rpsH protein networkhttps://string-db.org/network/212042.APH_0294Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the [...]
rplF protein networkhttps://string-db.org/network/212042.APH_0295Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA [...]
rplR protein networkhttps://string-db.org/network/212042.APH_029650S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protubera [...]
rpsE protein networkhttps://string-db.org/network/212042.APH_0297Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.
rplO protein networkhttps://string-db.org/network/212042.APH_0298Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
secY protein networkhttps://string-db.org/network/212042.APH_0299Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at [...]
adk protein networkhttps://string-db.org/network/212042.APH_0300Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolis [...]
rpsM protein networkhttps://string-db.org/network/212042.APH_0301Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of [...]
rpsK protein networkhttps://string-db.org/network/212042.APH_0302Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs t [...]
rpoA protein networkhttps://string-db.org/network/212042.APH_0303DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplQ protein networkhttps://string-db.org/network/212042.APH_0304Ribosomal protein L17; Identified by similarity to SP:P02416; match to protein family HMM PF01196; match to protein family HMM TIGR00059.
pheT protein networkhttps://string-db.org/network/212042.APH_0305phenylalanyl-tRNA synthetase, beta subunit; Identified by similarity to SP:P07395; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; m [...]
APH_0306 protein networkhttps://string-db.org/network/212042.APH_0306Identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360.
APH_0307 protein networkhttps://string-db.org/network/212042.APH_0307Identified by match to protein family HMM PF01235.
rnpA protein networkhttps://string-db.org/network/212042.APH_0308Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. [...]
rpmH protein networkhttps://string-db.org/network/212042.APH_0309Ribosomal protein L34; Identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; Belongs to the bacterial ribosomal protein bL34 family.
ubiA protein networkhttps://string-db.org/network/212042.APH_03104-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubi [...]
APH_0311 protein networkhttps://string-db.org/network/212042.APH_0311Identified by match to protein family HMM PF01613.
APH_0312 protein networkhttps://string-db.org/network/212042.APH_0312Hypothetical protein; Identified by Glimmer2; putative.
pstB protein networkhttps://string-db.org/network/212042.APH_0313Phosphate ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
tgt protein networkhttps://string-db.org/network/212042.APH_0314Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in [...]
rpmF protein networkhttps://string-db.org/network/212042.APH_0315Ribosomal protein L32; Identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; Belongs to the bacterial ribosomal protein bL32 family.
plsX protein networkhttps://string-db.org/network/212042.APH_0316Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fa [...]
fabH protein networkhttps://string-db.org/network/212042.APH_03173-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first [...]
p44-N-2 protein networkhttps://string-db.org/network/212042.APH_0318P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
p44-69 protein networkhttps://string-db.org/network/212042.APH_0319Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0320 protein networkhttps://string-db.org/network/212042.APH_0320Hypothetical protein; Identified by Glimmer2; putative.
tadA protein networkhttps://string-db.org/network/212042.APH_0321Cytidine and deoxycytidylate deaminase family protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deami [...]
APH_0322 protein networkhttps://string-db.org/network/212042.APH_0322Conserved hypothetical protein; Identified by similarity to GB:AAS14136.1.
dnaB protein networkhttps://string-db.org/network/212042.APH_0323Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DN [...]
APH_0325 protein networkhttps://string-db.org/network/212042.APH_0325Oxidoreductase, FAD-binding protein; Identified by match to protein family HMM PF01266.
APH_0328 protein networkhttps://string-db.org/network/212042.APH_0328Conserved domain protein.
ispA protein networkhttps://string-db.org/network/212042.APH_0329Geranyltranstransferase; Identified by similarity to SP:Q08291; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
nrdA protein networkhttps://string-db.org/network/212042.APH_0331Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [...]
APH_0332 protein networkhttps://string-db.org/network/212042.APH_0332Conserved hypothetical protein TIGR00250; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
APH_0333 protein networkhttps://string-db.org/network/212042.APH_0333Hypothetical protein; Identified by Glimmer2; putative.
purA protein networkhttps://string-db.org/network/212042.APH_0336Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to t [...]
APH_0337 protein networkhttps://string-db.org/network/212042.APH_0337Primosomal protein N truncated.
APH_0338 protein networkhttps://string-db.org/network/212042.APH_0338OmpA family protein; Identified by similarity to SP:P07176; match to protein family HMM PF00691.
APH_0339 protein networkhttps://string-db.org/network/212042.APH_0339Putative thermostable metallocarboxypeptidase; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
tkt protein networkhttps://string-db.org/network/212042.APH_0340Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
APH_0341 protein networkhttps://string-db.org/network/212042.APH_0341Putative monovalent cation/proton antiporter, MrpF/PhaF subunit; Identified by match to protein family HMM PF04066.
APH_0342 protein networkhttps://string-db.org/network/212042.APH_0342Monovalent cation/proton antiporter, MnhG/PhaG subunit.
APH_0344 protein networkhttps://string-db.org/network/212042.APH_0344Putative monovalent cation/proton antiporter; Identified by similarity to GB:AAS14942.1; match to protein family HMM PF00420.
APH_0345 protein networkhttps://string-db.org/network/212042.APH_0345Ribonuclease, Rne/Rng family; Identified by similarity to SP:P21513; match to protein family HMM PF00575; match to protein family HMM TIGR00757.
dnaK protein networkhttps://string-db.org/network/212042.APH_0346Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
APH_0347 protein networkhttps://string-db.org/network/212042.APH_0347Identified by match to protein family HMM PF03364.
APH_0348 protein networkhttps://string-db.org/network/212042.APH_0348Identified by match to protein family HMM PF00361.
ffh protein networkhttps://string-db.org/network/212042.APH_0349Signal recognition particle protein; Identified by similarity to SP:P07019; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to [...]
era protein networkhttps://string-db.org/network/212042.APH_0350GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly als [...]
APH_0351 protein networkhttps://string-db.org/network/212042.APH_0351Conserved hypothetical protein; Identified by similarity to GB:AAS14435.1.
APH_0352 protein networkhttps://string-db.org/network/212042.APH_0352Conserved hypothetical protein; Identified by similarity to GB:AAS13980.1; match to protein family HMM TIGR02281.
APH_0353 protein networkhttps://string-db.org/network/212042.APH_0353Metallopeptidase, M24 family; Identified by match to protein family HMM PF00557.
APH_0354 protein networkhttps://string-db.org/network/212042.APH_0354Conserved hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
APH_0355 protein networkhttps://string-db.org/network/212042.APH_0355Conserved hypothetical protein; Identified by similarity to GB:AAS14235.1.
priA protein networkhttps://string-db.org/network/212042.APH_0356Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its h [...]
APH_0357 protein networkhttps://string-db.org/network/212042.APH_0357Hypothetical protein; Identified by Glimmer2; putative.
APH_0358 protein networkhttps://string-db.org/network/212042.APH_0358Hypothetical protein; Identified by Glimmer2; putative.
rpmB protein networkhttps://string-db.org/network/212042.APH_0359Ribosomal protein L28; Identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; Belongs to the bacterial ribosomal protein bL28 family.
APH_0360 protein networkhttps://string-db.org/network/212042.APH_0360Hypothetical protein; Identified by Glimmer2; putative.
APH_0361 protein networkhttps://string-db.org/network/212042.APH_0361Hypothetical protein; Identified by Glimmer2; putative.
APH_0362 protein networkhttps://string-db.org/network/212042.APH_0362Ribosomal large subunit pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
APH_0363 protein networkhttps://string-db.org/network/212042.APH_0363Hypothetical protein; Identified by Glimmer2; putative.
pccA protein networkhttps://string-db.org/network/212042.APH_0364propionyl-CoA carboxylase, alpha subunit; Identified by similarity to SP:P05165; match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02785; mat [...]
APH_0365 protein networkhttps://string-db.org/network/212042.APH_0365Hypothetical protein; Identified by Glimmer2; putative.
APH_0366 protein networkhttps://string-db.org/network/212042.APH_0366Hypothetical protein; Identified by Glimmer2; putative.
lipA protein networkhttps://string-db.org/network/212042.APH_0367Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes [...]
APH_0369 protein networkhttps://string-db.org/network/212042.APH_0369Hypothetical protein; Identified by Glimmer2; putative.
pstA protein networkhttps://string-db.org/network/212042.APH_0370Phosphate ABC transporter, permease protein PtsA; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974.
sodB protein networkhttps://string-db.org/network/212042.APH_0371Fe superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
virB3 protein networkhttps://string-db.org/network/212042.APH_0372Type IV secretion system protein VirB3; Identified by similarity to GB:AAM00406.1; match to protein family HMM PF05101.
virB4-1 protein networkhttps://string-db.org/network/212042.APH_0373Type IV secretion system protein VirB4 (VirB4-1); Name change from VirB4-1 to VirB4-2. PMID: 20670295.
virB6-1 protein networkhttps://string-db.org/network/212042.APH_0374Type IV secretion system protein VirB6-1; Name change from VirB6 to VirB6-1. PMID: 18952796, 20670295.
virB6-2 protein networkhttps://string-db.org/network/212042.APH_0375Type IV secretion system protein VirB6 family (VirB6-2); Name change from VirB6 to VirB6-2. PMID: 18952796, 20670295.
virB6-3 protein networkhttps://string-db.org/network/212042.APH_0376Type IV secretion system protein VirB6 family (VirB6-3); Name change from VirB6 to VirB6-3. PMID: 18952796, 20670295.
virB6-4 protein networkhttps://string-db.org/network/212042.APH_0377Type IV secretion system protein VirB6 family (VirB6-4); Name change from VirB6 to VirB6-4. PMID: 18952796, 20670295.
APH_0378 protein networkhttps://string-db.org/network/212042.APH_0378Identified by similarity to GB:AAS14953.1; match to protein family HMM TIGR02217.
dut protein networkhttps://string-db.org/network/212042.APH_0379Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intrace [...]
ispH protein networkhttps://string-db.org/network/212042.APH_03804-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethyl [...]
carA protein networkhttps://string-db.org/network/212042.APH_0381Carbamoyl-phosphate synthase, small subunit; Identified by similarity to SP:P25993; match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368 [...]
APH_0382 protein networkhttps://string-db.org/network/212042.APH_0382HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0385 protein networkhttps://string-db.org/network/212042.APH_0385HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0386 protein networkhttps://string-db.org/network/212042.APH_0386HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0387 protein networkhttps://string-db.org/network/212042.APH_0387HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0388 protein networkhttps://string-db.org/network/212042.APH_0388Hypothetical protein; Identified by Glimmer2; putative.
gpmI protein networkhttps://string-db.org/network/212042.APH_03892,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
der protein networkhttps://string-db.org/network/212042.APH_0390Putative GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Eng [...]
APH_0391 protein networkhttps://string-db.org/network/212042.APH_0391Hypothetical protein; Identified by Glimmer2; putative.
APH_0392 protein networkhttps://string-db.org/network/212042.APH_0392PQQ enzyme repeat domain protein.
lpdA-2 protein networkhttps://string-db.org/network/212042.APH_0393Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF03486; m [...]
APH_0394 protein networkhttps://string-db.org/network/212042.APH_0394Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
infA protein networkhttps://string-db.org/network/212042.APH_0395Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl- [...]
maf protein networkhttps://string-db.org/network/212042.APH_0396Maf protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
rpsB protein networkhttps://string-db.org/network/212042.APH_0397Ribosomal protein S2; Identified by similarity to SP:P02351; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family.
tsf protein networkhttps://string-db.org/network/212042.APH_0398Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis [...]
APH_0399 protein networkhttps://string-db.org/network/212042.APH_0399ABC 3 transport family protein; Identified by match to protein family HMM PF00950.
APH_0400 protein networkhttps://string-db.org/network/212042.APH_0400Hypothetical protein; Identified by Glimmer2; putative.
petA protein networkhttps://string-db.org/network/212042.APH_0401Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that genera [...]
petB protein networkhttps://string-db.org/network/212042.APH_0402Ubiquinol-cytochrome c reductase, cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an [...]
petC protein networkhttps://string-db.org/network/212042.APH_0403Ubiquinol-cytochrome c reductase, cytochrome c1; Identified by similarity to SP:P23135; match to protein family HMM PF02167.
asp62 protein networkhttps://string-db.org/network/212042.APH_0404Anaplasma surface protein P62 (Asp62); Name change according to the cited literature. PMID: 17766422.
asp55 protein networkhttps://string-db.org/network/212042.APH_0405Anaplasma surface protein P55 (Asp55); Name change according to the cited literature. PMID: 17766422.
APH_0406 protein networkhttps://string-db.org/network/212042.APH_0406Hypothetical protein; Identified by Glimmer2; putative.
gltX-2 protein networkhttps://string-db.org/network/212042.APH_0408glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end [...]
APH_0409 protein networkhttps://string-db.org/network/212042.APH_0409Hypothetical protein; Identified by Glimmer2; putative.
mutM protein networkhttps://string-db.org/network/212042.APH_0411formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a [...]
APH_0412 protein networkhttps://string-db.org/network/212042.APH_0412Glucose-inhibited division protein, degenerate; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA [...]
pccB protein networkhttps://string-db.org/network/212042.APH_0415propionyl-CoA carboxylase, beta subunit; Identified by similarity to SP:P05166; match to protein family HMM PF01039.
APH_0416 protein networkhttps://string-db.org/network/212042.APH_0416Hypothetical protein; Identified by Glimmer2; putative.
APH_0417 protein networkhttps://string-db.org/network/212042.APH_0417Type IV secretion system protein VirB4, N-terminal truncated; Identified by similarity to GB:AAM00407.1.
APH_0418 protein networkhttps://string-db.org/network/212042.APH_0418Type IV secretion system protein VirB6,C-terminal truncated.
APH_0419 protein networkhttps://string-db.org/network/212042.APH_0419Type IV secretion system protein VirB4, truncated; Identified by similarity to GB:AAM00407.1.
prfA protein networkhttps://string-db.org/network/212042.APH_0420Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
engB protein networkhttps://string-db.org/network/212042.APH_0421Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. E [...]
argB protein networkhttps://string-db.org/network/212042.APH_0422Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate.
hemF protein networkhttps://string-db.org/network/212042.APH_0423Coproporphyrinogen III oxidase, aerobic; Identified by similarity to SP:P36553; match to protein family HMM PF01218.
APH_0424 protein networkhttps://string-db.org/network/212042.APH_0424Identified by match to protein family HMM PF00375; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
APH_0425 protein networkhttps://string-db.org/network/212042.APH_0425Hypothetical protein; Identified by Glimmer2; putative.
APH_0426 protein networkhttps://string-db.org/network/212042.APH_0426Hypothetical protein; Identified by Glimmer2; putative.
serS protein networkhttps://string-db.org/network/212042.APH_0427seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further [...]
APH_0428 protein networkhttps://string-db.org/network/212042.APH_0428Putative DNA recombination protein RmuC; Identified by similarity to SP:P27850; match to protein family HMM PF02646.
APH_0429 protein networkhttps://string-db.org/network/212042.APH_0429Hypothetical protein; Identified by Glimmer2; putative.
virB8-2 protein networkhttps://string-db.org/network/212042.APH_0430Type IV secretion system protein VirB8-2; Name change from VirB8-1 to VirB8-2. PMID: 20670295.
miaA protein networkhttps://string-db.org/network/212042.APH_0431tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to th [...]
APH_0432 protein networkhttps://string-db.org/network/212042.APH_0432Conserved hypothetical protein; Identified by similarity to GB:AAS14508.1.
APH_0433 protein networkhttps://string-db.org/network/212042.APH_0433Conserved domain protein.
nuoF protein networkhttps://string-db.org/network/212042.APH_0434NADH dehydrogenase I, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
nuoJ protein networkhttps://string-db.org/network/212042.APH_0435NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocati [...]
nuoK protein networkhttps://string-db.org/network/212042.APH_0436NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoL protein networkhttps://string-db.org/network/212042.APH_0437NADH dehydrogenase I, L subunit; Identified by similarity to SP:P29924; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
nuoM protein networkhttps://string-db.org/network/212042.APH_0438NADH dehydrogenase I, M subunit; Identified by similarity to SP:P29925; match to protein family HMM PF00361; match to protein family HMM TIGR01972.
nuoN protein networkhttps://string-db.org/network/212042.APH_0439NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
dxr protein networkhttps://string-db.org/network/212042.APH_04401-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Be [...]
APH_0441 protein networkhttps://string-db.org/network/212042.APH_0441Hypothetical protein; Identified by Glimmer2; putative.
ispG protein networkhttps://string-db.org/network/212042.APH_04424-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate.
tatC protein networkhttps://string-db.org/network/212042.APH_0443Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their sign [...]
APH_0444 protein networkhttps://string-db.org/network/212042.APH_0444Transporter, AcrB/AcrD/AcrF family; Identified by match to protein family HMM PF00873; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
nusA protein networkhttps://string-db.org/network/212042.APH_0445N utilization substance protein A; Participates in both transcription termination and antitermination.
infB protein networkhttps://string-db.org/network/212042.APH_0446Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to [...]
rbfA protein networkhttps://string-db.org/network/212042.APH_0447Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but n [...]
APH_0448 protein networkhttps://string-db.org/network/212042.APH_0448Translation elongation factor G, truncated.
APH_0449 protein networkhttps://string-db.org/network/212042.APH_0449Integral membrane protein, TerC family; Identified by match to protein family HMM PF03741.
clpA protein networkhttps://string-db.org/network/212042.APH_0450ATP-dependent Clp protease, ATP-binding subunit ClpA; Identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM [...]
typA protein networkhttps://string-db.org/network/212042.APH_0451GTP-binding protein TypA; Identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match [...]
APH_0455 protein networkhttps://string-db.org/network/212042.APH_0455HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0456 protein networkhttps://string-db.org/network/212042.APH_0456Hypothetical protein; Identified by Glimmer2; putative.
APH_0457 protein networkhttps://string-db.org/network/212042.APH_0457HGE-14 protein; Identified by similarity to GB:AAK69700.1.
APH_0458 protein networkhttps://string-db.org/network/212042.APH_0458Hypothetical protein; Identified by Glimmer2; putative.
APH_0459 protein networkhttps://string-db.org/network/212042.APH_0459Hypothetical protein; Identified by Glimmer2; putative.
APH_0460 protein networkhttps://string-db.org/network/212042.APH_0460Hypothetical protein; Identified by Glimmer2; putative.
APH_0461 protein networkhttps://string-db.org/network/212042.APH_0461Hypothetical protein; Identified by Glimmer2; putative.
APH_0462 protein networkhttps://string-db.org/network/212042.APH_0462aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
APH_0463 protein networkhttps://string-db.org/network/212042.APH_0463Peptide chain release factor 2, truncated; Identified by similarity to SP:P28367.
ssb protein networkhttps://string-db.org/network/212042.APH_0465Single-strand binding protein; Identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621.
APH_0466 protein networkhttps://string-db.org/network/212042.APH_0466Hypothetical protein; Identified by Glimmer2; putative.
APH_0467 protein networkhttps://string-db.org/network/212042.APH_0467Hypothetical protein; Identified by Glimmer2; putative.
APH_0468 protein networkhttps://string-db.org/network/212042.APH_0468Peptide chain release factor 2, truncated; Identified by similarity to SP:P07012; match to protein family HMM PF03462.
APH_0469 protein networkhttps://string-db.org/network/212042.APH_0469Putative malonyl-CoA decarboxylase; Identified by similarity to GB:AAD48994.1; match to protein family HMM PF05292.
gatB protein networkhttps://string-db.org/network/212042.APH_0470glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
APH_0471 protein networkhttps://string-db.org/network/212042.APH_0471Exodeoxyribonuclease III, N-terminal truncated; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633.
fabI protein networkhttps://string-db.org/network/212042.APH_0473Enoyl-(acyl-carrier-protein) reductase; Identified by similarity to SP:P54616.
dnaA protein networkhttps://string-db.org/network/212042.APH_0474Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically doub [...]
APH_0475 protein networkhttps://string-db.org/network/212042.APH_0475Hypothetical protein; Identified by Glimmer2; putative.
APH_0476 protein networkhttps://string-db.org/network/212042.APH_0476Hypothetical protein; Identified by Glimmer2; putative.
APH_0477 protein networkhttps://string-db.org/network/212042.APH_0477Hypothetical protein; Identified by Glimmer2; putative.
APH_0478 protein networkhttps://string-db.org/network/212042.APH_0478aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
prfB protein networkhttps://string-db.org/network/212042.APH_0479Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
APH_0480 protein networkhttps://string-db.org/network/212042.APH_0480Conserved hypothetical protein TIGR01033; Identified by similarity to GB:AAS14201.1; match to protein family HMM PF01709; match to protein family HMM TIGR01033.
APH_0481 protein networkhttps://string-db.org/network/212042.APH_0481Identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765.
bioA protein networkhttps://string-db.org/network/212042.APH_0482Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Identified by similarity to SP:P12995; match to protein family HMM PF00202; match to protein family HMM TIGR00508; Belongs to the class [...]
APH_0483 protein networkhttps://string-db.org/network/212042.APH_0483Hypothetical protein; Identified by Glimmer2; putative.
APH_0484 protein networkhttps://string-db.org/network/212042.APH_0484Hypothetical protein; Identified by Glimmer2; putative.
APH_0487 protein networkhttps://string-db.org/network/212042.APH_0487Hypothetical protein; Identified by Glimmer2; putative.
APH_0488 protein networkhttps://string-db.org/network/212042.APH_0488Hypothetical protein; Identified by Glimmer2; putative.
APH_0492 protein networkhttps://string-db.org/network/212042.APH_0492Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
atpC protein networkhttps://string-db.org/network/212042.APH_0493ATP synthase F1, epsilon subunit; Identified by match to protein family HMM PF02823.
atpD protein networkhttps://string-db.org/network/212042.APH_0494ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase [...]
mgtE protein networkhttps://string-db.org/network/212042.APH_0496Magnesium transporter; Acts as a magnesium transporter.
truA protein networkhttps://string-db.org/network/212042.APH_0502tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
pyrB protein networkhttps://string-db.org/network/212042.APH_0503Aspartate carbamoyltransferase; Identified by similarity to SP:P56585; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; Belongs to [...]
rrmJ protein networkhttps://string-db.org/network/212042.APH_0504Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.
xth protein networkhttps://string-db.org/network/212042.APH_0505Exodeoxyribonuclease III; Identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633.
APH_0506 protein networkhttps://string-db.org/network/212042.APH_0506Hypothetical protein; Identified by Glimmer2; putative.
APH_0507 protein networkhttps://string-db.org/network/212042.APH_0507Hypothetical protein; Identified by Glimmer2; putative.
rpmJ protein networkhttps://string-db.org/network/212042.APH_0508Ribosomal protein L36; Identified by match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family.
APH_0509 protein networkhttps://string-db.org/network/212042.APH_0509Hypothetical protein; Identified by Glimmer2; putative.
APH_0510 protein networkhttps://string-db.org/network/212042.APH_0510Putative lipoprotein.
APH_0511 protein networkhttps://string-db.org/network/212042.APH_0511NADH dehydrogenase I, C subunit, truncated; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subun [...]
APH_0513 protein networkhttps://string-db.org/network/212042.APH_0513Smr domain protein; Identified by match to protein family HMM PF01713.
rpoZ protein networkhttps://string-db.org/network/212042.APH_0514DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and al [...]
apxR protein networkhttps://string-db.org/network/212042.APH_0515Expression regulator ApxR; Name change according to the cited literature. PMID: 17483233.
APH_0517 protein networkhttps://string-db.org/network/212042.APH_0517Hypothetical protein; Identified by Glimmer2; putative.
APH_0518 protein networkhttps://string-db.org/network/212042.APH_0518Hypothetical protein; Identified by Glimmer2; putative.
nuoA protein networkhttps://string-db.org/network/212042.APH_0519NADH dehydrogenase I, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoB protein networkhttps://string-db.org/network/212042.APH_0520NADH dehydrogenase I, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoC protein networkhttps://string-db.org/network/212042.APH_0521NADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
surE protein networkhttps://string-db.org/network/212042.APH_0524Stationary-phase survival protein SurE; Identified by similarity to SP:P36664; match to protein family HMM PF01975; match to protein family HMM TIGR00087.
ccmE protein networkhttps://string-db.org/network/212042.APH_0526Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in [...]
pyrF protein networkhttps://string-db.org/network/212042.APH_0527Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).
APH_0528 protein networkhttps://string-db.org/network/212042.APH_0528Hydrolase, TatD family; Identified by similarity to SP:P37346; match to protein family HMM PF01026; match to protein family HMM TIGR00010.
APH_0529 protein networkhttps://string-db.org/network/212042.APH_0529Hypothetical protein; Identified by Glimmer2; putative.
APH_0530 protein networkhttps://string-db.org/network/212042.APH_0530Hydrolase, TatD family, truncated; Identified by similarity to SP:P37346.
APH_0532 protein networkhttps://string-db.org/network/212042.APH_0532Hypothetical protein; Identified by Glimmer2; putative.
APH_0533 protein networkhttps://string-db.org/network/212042.APH_0533Hypothetical protein; Identified by Glimmer2; putative.
leuS protein networkhttps://string-db.org/network/212042.APH_0534leucyl-tRNA synthetase; Identified by similarity to SP:P56457; match to protein family HMM PF00133; match to protein family HMM TIGR00396; Belongs to the class-I aminoacyl-tRNA synthetase family.
p44-82 protein networkhttps://string-db.org/network/212042.APH_0535P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
uvrA protein networkhttps://string-db.org/network/212042.APH_0537Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed o [...]
nusB protein networkhttps://string-db.org/network/212042.APH_0538N utilization substance protein B; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of t [...]
ribH protein networkhttps://string-db.org/network/212042.APH_05396,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. [...]
yidC protein networkhttps://string-db.org/network/212042.APH_0540Inner membrane protein, 60 kDa; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane prot [...]
APH_0541 protein networkhttps://string-db.org/network/212042.APH_0541Putative membrane protein; Identified by match to protein family HMM PF02096.
APH_0542 protein networkhttps://string-db.org/network/212042.APH_0542Putative NADH-quinone oxidoreductase, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
pssA protein networkhttps://string-db.org/network/212042.APH_0543CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase [...]
psd protein networkhttps://string-db.org/network/212042.APH_0544Putative phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
APH_0545 protein networkhttps://string-db.org/network/212042.APH_0545heme/FAD-binding domain protein; Identified by similarity to GB:CAD84769.1; match to protein family HMM PF00175; match to protein family HMM PF00970.
APH_0546 protein networkhttps://string-db.org/network/212042.APH_0546Conserved domain protein.
efp protein networkhttps://string-db.org/network/212042.APH_0547Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functi [...]
APH_0548 protein networkhttps://string-db.org/network/212042.APH_0548Putative inositol monophosphatase.
rluC protein networkhttps://string-db.org/network/212042.APH_0549Ribosomal large subunit pseudouridine synthase C; Identified by similarity to SP:P23851; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR [...]
APH_0550 protein networkhttps://string-db.org/network/212042.APH_0550Hypothetical protein; Identified by Glimmer2; putative.
pleD protein networkhttps://string-db.org/network/212042.APH_0551Response regulator/GGDEF domain protein PleD; Name change according to the cited literature. PMID: 16882029.
APH_0552 protein networkhttps://string-db.org/network/212042.APH_0552Putative twin-arginine translocation protein TatB; Identified by similarity to SP:O69415; match to protein family HMM PF02416.
APH_0553 protein networkhttps://string-db.org/network/212042.APH_0553Identified by match to protein family HMM PF05088.
APH_0554 protein networkhttps://string-db.org/network/212042.APH_0554Putative exopolysaccharide synthesis protein ExoD; Identified by similarity to SP:Q52923; match to protein family HMM PF06055.
cysS protein networkhttps://string-db.org/network/212042.APH_0555cysteinyl-tRNA synthetase; Identified by similarity to SP:P21888; match to protein family HMM PF01406; match to protein family HMM TIGR00435; Belongs to the class-I aminoacyl-tRNA synthetase fami [...]
APH_0556 protein networkhttps://string-db.org/network/212042.APH_0556Hypothetical protein; Identified by Glimmer2; putative.
APH_0558 protein networkhttps://string-db.org/network/212042.APH_0558Hypothetical protein; Identified by Glimmer2; putative.
APH_0559 protein networkhttps://string-db.org/network/212042.APH_0559Hypothetical protein; Identified by Glimmer2; putative.
nrdB protein networkhttps://string-db.org/network/212042.APH_0560Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; [...]
APH_0561 protein networkhttps://string-db.org/network/212042.APH_0561Putative thiol-disulfide oxidoreductase; Identified by similarity to SP:P35160.
APH_0564 protein networkhttps://string-db.org/network/212042.APH_0564arginyl-tRNA synthetase, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
APH_0565 protein networkhttps://string-db.org/network/212042.APH_0565Conserved hypothetical protein; Identified by similarity to GB:AAS14408.1.
APH_0566 protein networkhttps://string-db.org/network/212042.APH_0566Conserved hypothetical protein; Identified by similarity to GB:AAS14410.1; match to protein family HMM PF02636.
APH_0569 protein networkhttps://string-db.org/network/212042.APH_0569Hypothetical protein; Identified by Glimmer2; putative.
APH_0570 protein networkhttps://string-db.org/network/212042.APH_0570Hypothetical protein; Identified by Glimmer2; putative.
dnaG protein networkhttps://string-db.org/network/212042.APH_0571DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
APH_0572 protein networkhttps://string-db.org/network/212042.APH_0572DNA mismatch repair protein MutS, truncated; Identified by match to protein family HMM PF00488.
APH_0573 protein networkhttps://string-db.org/network/212042.APH_0573Hypothetical protein; Identified by Glimmer2; putative.
ispE protein networkhttps://string-db.org/network/212042.APH_05744-diphosphocytidyl-2C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
APH_0575 protein networkhttps://string-db.org/network/212042.APH_0575Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target u [...]
rpoD protein networkhttps://string-db.org/network/212042.APH_0576RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the p [...]
cutA protein networkhttps://string-db.org/network/212042.APH_0581Periplasmic divalent cation tolerance protein CutA; Update coordinate end3 to include the stop codon TAA.
cckA protein networkhttps://string-db.org/network/212042.APH_0582Sensor histidine kinase/response regulator CckA; Name change according to the cited literature. PMID: 16882029.
APH_0584 protein networkhttps://string-db.org/network/212042.APH_0584Identified by match to protein family HMM PF01596.
APH_0585 protein networkhttps://string-db.org/network/212042.APH_0585Conserved hypothetical protein; Identified by similarity to GB:AAS14713.1.
APH_0586 protein networkhttps://string-db.org/network/212042.APH_0586Thiamine biosynthesis protein ThiC, truncated; Identified by similarity to SP:P30136.
APH_0587 protein networkhttps://string-db.org/network/212042.APH_0587Hypothetical protein; Identified by Glimmer2; putative.
nnrE protein networkhttps://string-db.org/network/212042.APH_0588YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted [...]
APH_0589 protein networkhttps://string-db.org/network/212042.APH_0589Hypothetical protein; Identified by Glimmer2; putative.
APH_0590 protein networkhttps://string-db.org/network/212042.APH_0590Hypothetical protein; Identified by Glimmer2; putative.
APH_0591 protein networkhttps://string-db.org/network/212042.APH_0591Hypothetical protein; Identified by Glimmer2; putative.
APH_0592 protein networkhttps://string-db.org/network/212042.APH_0592Hypothetical protein; Identified by Glimmer2; putative.
APH_0593 protein networkhttps://string-db.org/network/212042.APH_0593Hypothetical protein; Identified by Glimmer2; putative.
APH_0594 protein networkhttps://string-db.org/network/212042.APH_0594Putative membrane protein.
APH_0595 protein networkhttps://string-db.org/network/212042.APH_0595Hypothetical protein; Identified by Glimmer2; putative.
APH_0596 protein networkhttps://string-db.org/network/212042.APH_0596Hypothetical protein; Identified by Glimmer2; putative.
topA protein networkhttps://string-db.org/network/212042.APH_0597DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of [...]
thiC protein networkhttps://string-db.org/network/212042.APH_0600Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methio [...]
APH_0601 protein networkhttps://string-db.org/network/212042.APH_0601Conserved hypothetical protein; Identified by similarity to GB:AAS13958.1.
APH_0602 protein networkhttps://string-db.org/network/212042.APH_0602Hypothetical protein; Identified by Glimmer2; putative.
APH_0604 protein networkhttps://string-db.org/network/212042.APH_0604Hypothetical protein; Identified by Glimmer2; putative.
APH_0605 protein networkhttps://string-db.org/network/212042.APH_0605Hypothetical protein; Identified by Glimmer2; putative.
ubiG protein networkhttps://string-db.org/network/212042.APH_06063-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG [...]
lysS protein networkhttps://string-db.org/network/212042.APH_0607lysyl-tRNA synthetase; Identified by similarity to SP:O27585; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family.
APH_0608 protein networkhttps://string-db.org/network/212042.APH_0608ppiC/parvulin rotamase family protein; Identified by similarity to SP:P77241.
APH_0609 protein networkhttps://string-db.org/network/212042.APH_0609Hypothetical protein; Identified by Glimmer2; putative.
APH_0610 protein networkhttps://string-db.org/network/212042.APH_0610Identified by match to protein family HMM PF00814.
APH_0611 protein networkhttps://string-db.org/network/212042.APH_0611Putative membrane protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
APH_0612 protein networkhttps://string-db.org/network/212042.APH_0612Putative membrane protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
APH_0614 protein networkhttps://string-db.org/network/212042.APH_0614Putative rod shape-determining protein; Identified by match to protein family HMM PF04085.
APH_0615 protein networkhttps://string-db.org/network/212042.APH_0615Hypothetical protein; Identified by Glimmer2; putative.
APH_0617 protein networkhttps://string-db.org/network/212042.APH_0617Conserved hypothetical protein; Identified by similarity to GB:AAS14116.1.
APH_0618 protein networkhttps://string-db.org/network/212042.APH_0618Hypothetical protein; Identified by Glimmer2; putative.
APH_0621 protein networkhttps://string-db.org/network/212042.APH_0621Hypothetical protein; Identified by Glimmer2; putative.
ksgA protein networkhttps://string-db.org/network/212042.APH_0622Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a c [...]
tpiA protein networkhttps://string-db.org/network/212042.APH_0624Triosephosphate isomerase; Identified by similarity to SP:P04790; match to protein family HMM PF00121; match to protein family HMM TIGR00419.
APH_0625 protein networkhttps://string-db.org/network/212042.APH_0625Immunogenic protein; Identified by similarity to SP:P12920; match to protein family HMM TIGR02122.
tsaD protein networkhttps://string-db.org/network/212042.APH_0626Putative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine [...]
APH_0627 protein networkhttps://string-db.org/network/212042.APH_0627RDD family protein; Identified by match to protein family HMM PF06271.
folB protein networkhttps://string-db.org/network/212042.APH_0628Dihydroneopterin aldolase; Identified by similarity to SP:P46362; match to protein family HMM PF02152; match to protein family HMM TIGR00526.
mdh protein networkhttps://string-db.org/network/212042.APH_0629Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
APH_0630 protein networkhttps://string-db.org/network/212042.APH_0630Hypothetical protein; Identified by Glimmer2; putative.
p44-84a protein networkhttps://string-db.org/network/212042.APH_0632P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0633 protein networkhttps://string-db.org/network/212042.APH_0633Hypothetical protein; Identified by Glimmer2; putative.
APH_0634 protein networkhttps://string-db.org/network/212042.APH_0634Phage conserved hypothetical protein, phiE125 gp8 family; Identified by match to protein family HMM TIGR02215.
APH_0635 protein networkhttps://string-db.org/network/212042.APH_0635Hypothetical protein; Identified by Glimmer2; putative.
APH_0636 protein networkhttps://string-db.org/network/212042.APH_0636Conserved hypothetical protein; Identified by similarity to GB:AAS13839.1.
APH_0641 protein networkhttps://string-db.org/network/212042.APH_0641Hypothetical protein; Identified by Glimmer2; putative.
rpiB protein networkhttps://string-db.org/network/212042.APH_0642Ribose 5-phosphate isomerase B; Identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120.
APH_0643 protein networkhttps://string-db.org/network/212042.APH_0643Hypothetical protein; Identified by Glimmer2; putative.
APH_0645 protein networkhttps://string-db.org/network/212042.APH_0645Hypothetical protein; Identified by Glimmer2; putative.
acpS protein networkhttps://string-db.org/network/212042.APH_0646Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
proS protein networkhttps://string-db.org/network/212042.APH_0647prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRN [...]
APH_0648 protein networkhttps://string-db.org/network/212042.APH_0648Conserved hypothetical protein; Identified by similarity to GB:AAS14235.1.
coaD protein networkhttps://string-db.org/network/212042.APH_0650Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial Co [...]
APH_0652 protein networkhttps://string-db.org/network/212042.APH_0652Hypothetical protein; Identified by Glimmer2; putative.
APH_0653 protein networkhttps://string-db.org/network/212042.APH_0653Hypothetical protein; Identified by Glimmer2; putative.
APH_0655 protein networkhttps://string-db.org/network/212042.APH_0655Hypothetical protein; Identified by Glimmer2; putative.
APH_0656 protein networkhttps://string-db.org/network/212042.APH_0656Hypothetical protein; Identified by Glimmer2; putative.
APH_0657 protein networkhttps://string-db.org/network/212042.APH_0657Hypothetical protein; Identified by Glimmer2; putative.
trxB protein networkhttps://string-db.org/network/212042.APH_0658Thioredoxin-disulfide reductase; Identified by similarity to SP:P09625; match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
APH_0659 protein networkhttps://string-db.org/network/212042.APH_0659Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578.
aspC protein networkhttps://string-db.org/network/212042.APH_0660Aspartate aminotransferase; Identified by similarity to SP:Q02635; match to protein family HMM PF00155.
APH_0661 protein networkhttps://string-db.org/network/212042.APH_0661Hypothetical protein; Identified by Glimmer2; putative.
p44-70 protein networkhttps://string-db.org/network/212042.APH_0662Encodes a full-length P44 outer membrane protein.
p44-71 protein networkhttps://string-db.org/network/212042.APH_0663Encodes a full-length P44 outer membrane protein.
p44-72 protein networkhttps://string-db.org/network/212042.APH_0664Encodes a full-length P44 outer membrane protein.
APH_0667 protein networkhttps://string-db.org/network/212042.APH_0667Hypothetical protein; Identified by Glimmer2; putative.
fabG protein networkhttps://string-db.org/network/212042.APH_06683-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cy [...]
putA protein networkhttps://string-db.org/network/212042.APH_0669Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehy [...]
APH_0670 protein networkhttps://string-db.org/network/212042.APH_0670Hypothetical protein; Identified by Glimmer2; putative.
APH_0671 protein networkhttps://string-db.org/network/212042.APH_0671Conserved hypothetical protein; Identified by similarity to PIR:A97789.
APH_0672 protein networkhttps://string-db.org/network/212042.APH_0672Hypothetical protein; Identified by Glimmer2; putative.
APH_0673 protein networkhttps://string-db.org/network/212042.APH_0673Rrf2 family protein /cysteine desulfurase; Identified by similarity to GB:AAL10759.1; match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM PF02082 [...]
iscS protein networkhttps://string-db.org/network/212042.APH_0674Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental [...]
iscU protein networkhttps://string-db.org/network/212042.APH_0675FeS cluster assembly scaffold IscU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand [...]
APH_0676 protein networkhttps://string-db.org/network/212042.APH_0676Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
hscB protein networkhttps://string-db.org/network/212042.APH_0677Co-chaperone protein hscB; Identified by similarity to SP:P36540; match to protein family HMM PF00226.
hscA protein networkhttps://string-db.org/network/212042.APH_0678Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
APH_0679 protein networkhttps://string-db.org/network/212042.APH_0679Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00111.
APH_0680 protein networkhttps://string-db.org/network/212042.APH_0680Hypothetical protein; Identified by Glimmer2; putative.
APH_0681 protein networkhttps://string-db.org/network/212042.APH_0681Hypothetical protein; Identified by Glimmer2; putative.
APH_0682 protein networkhttps://string-db.org/network/212042.APH_0682Hypothetical protein; Identified by Glimmer2; putative.
APH_0683 protein networkhttps://string-db.org/network/212042.APH_0683Conserved hypothetical protein; Identified by similarity to GB:AAS14108.1.
APH_0684 protein networkhttps://string-db.org/network/212042.APH_0684Hypothetical protein; Identified by Glimmer2; putative.
APH_0685 protein networkhttps://string-db.org/network/212042.APH_0685Hypothetical protein; Identified by Glimmer2; putative.
APH_0686 protein networkhttps://string-db.org/network/212042.APH_0686Hypothetical protein; Identified by Glimmer2; putative.
APH_0687 protein networkhttps://string-db.org/network/212042.APH_0687Cytochrome c biogenesis family protein; Possible subunit of a heme lyase.
APH_0688 protein networkhttps://string-db.org/network/212042.APH_0688Phage conserved hypothetical protein BR0599; Identified by match to protein family HMM TIGR02218.
mraW protein networkhttps://string-db.org/network/212042.APH_0690S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
APH_0691 protein networkhttps://string-db.org/network/212042.APH_0691Hypothetical protein; Identified by Glimmer2; putative.
APH_0692 protein networkhttps://string-db.org/network/212042.APH_0692Hypothetical protein; Identified by Glimmer2; putative.
APH_0693 protein networkhttps://string-db.org/network/212042.APH_0693Identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
obg protein networkhttps://string-db.org/network/212042.APH_0694GTP-binding protein, GTP1/Obg family; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis ra [...]
eno protein networkhttps://string-db.org/network/212042.APH_0695Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
APH_0696 protein networkhttps://string-db.org/network/212042.APH_0696Conserved domain protein.
rplU protein networkhttps://string-db.org/network/212042.APH_0697Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
rpmA protein networkhttps://string-db.org/network/212042.APH_0698Ribosomal protein L27; Identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family.
argS protein networkhttps://string-db.org/network/212042.APH_0700arginyl-tRNA synthetase; Identified by similarity to SP:P46906; match to protein family HMM PF00750; match to protein family HMM PF01406; match to protein family HMM PF03485; match to protein fam [...]
APH_0703 protein networkhttps://string-db.org/network/212042.APH_0703Hypothetical protein; Identified by Glimmer2; putative.
APH_0704 protein networkhttps://string-db.org/network/212042.APH_0704Hypothetical protein; Identified by Glimmer2; putative.
pmbA protein networkhttps://string-db.org/network/212042.APH_0705pmbA protein; Identified by similarity to SP:P24231; match to protein family HMM PF01523.
folE protein networkhttps://string-db.org/network/212042.APH_0706GTP cyclohydrolase I; Identified by similarity to SP:P19465; match to protein family HMM PF01227.
atpG protein networkhttps://string-db.org/network/212042.APH_0707ATP synthase F1, gamma subunit; Identified by match to protein family HMM PF00231.
APH_0709 protein networkhttps://string-db.org/network/212042.APH_0709Ankyrin repeat protein; Identified by similarity to GB:AAP34830.1; match to protein family HMM PF00023.
APH_0710 protein networkhttps://string-db.org/network/212042.APH_0710Hypothetical protein; Identified by Glimmer2; putative.
nuoH protein networkhttps://string-db.org/network/212042.APH_0711NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
nuoG protein networkhttps://string-db.org/network/212042.APH_0712NADH-quinone oxidoreductase, chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton transl [...]
APH_0713 protein networkhttps://string-db.org/network/212042.APH_0713Conserved hypothetical protein; Identified by similarity to GB:AAS13913.1.
APH_0714 protein networkhttps://string-db.org/network/212042.APH_0714Hypothetical protein; Identified by Glimmer2; putative.
APH_0715 protein networkhttps://string-db.org/network/212042.APH_0715Hypothetical protein; Identified by Glimmer2; putative.
gyrB protein networkhttps://string-db.org/network/212042.APH_0716DNA gyrase, B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
APH_0717 protein networkhttps://string-db.org/network/212042.APH_0717Hypothetical protein; Identified by Glimmer2; putative.
APH_0718 protein networkhttps://string-db.org/network/212042.APH_0718Hypothetical protein; Identified by Glimmer2; putative.
APH_0719 protein networkhttps://string-db.org/network/212042.APH_0719Hypothetical protein; Identified by Glimmer2; putative.
APH_0720 protein networkhttps://string-db.org/network/212042.APH_0720Hypothetical protein; Identified by Glimmer2; putative.
APH_0721 protein networkhttps://string-db.org/network/212042.APH_0721Hypothetical protein; Identified by Glimmer2; putative.
APH_0722 protein networkhttps://string-db.org/network/212042.APH_0722Hypothetical protein; Identified by Glimmer2; putative.
APH_0723 protein networkhttps://string-db.org/network/212042.APH_0723Hypothetical protein; Identified by Glimmer2; putative.
APH_0724 protein networkhttps://string-db.org/network/212042.APH_0724Hypothetical protein; Identified by Glimmer2; putative.
APH_0726 protein networkhttps://string-db.org/network/212042.APH_0726Hypothetical protein; Identified by Glimmer2; putative.
dnaQ protein networkhttps://string-db.org/network/212042.APH_0730DNA polymerase III, epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing func [...]
nuoE protein networkhttps://string-db.org/network/212042.APH_0731NADH dehydrogenase I, E subunit; Identified by similarity to GB:CAA71011.1; match to protein family HMM PF01257; match to protein family HMM TIGR01958.
nuoD protein networkhttps://string-db.org/network/212042.APH_0732NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
APH_0733 protein networkhttps://string-db.org/network/212042.APH_0733Hypothetical protein; Identified by Glimmer2; putative.
APH_0734 protein networkhttps://string-db.org/network/212042.APH_0734Pyridine nucleotide-disulfide oxidoreductase family protein; Identified by match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992.
thiL protein networkhttps://string-db.org/network/212042.APH_0735Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thi [...]
recO protein networkhttps://string-db.org/network/212042.APH_0736DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
APH_0737 protein networkhttps://string-db.org/network/212042.APH_0737Hypothetical protein; Identified by Glimmer2; putative.
APH_0739 protein networkhttps://string-db.org/network/212042.APH_0739Hypothetical protein; Identified by Glimmer2; putative.
ankA protein networkhttps://string-db.org/network/212042.APH_0740Ankyrin-repeat protein AnkA; Name change according to the cited literature. PMID: 10921951, 10948155, 17587335.
APH_0741 protein networkhttps://string-db.org/network/212042.APH_0741Hypothetical protein; Identified by Glimmer2; putative.
APH_0742 protein networkhttps://string-db.org/network/212042.APH_0742Hypothetical protein; Identified by Glimmer2; putative.
APH_0743 protein networkhttps://string-db.org/network/212042.APH_0743Hypothetical protein; Identified by Glimmer2; putative.
APH_0744 protein networkhttps://string-db.org/network/212042.APH_0744Hypothetical protein; Identified by Glimmer2; putative.
murB protein networkhttps://string-db.org/network/212042.APH_0745UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
hemC protein networkhttps://string-db.org/network/212042.APH_0746Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
folC protein networkhttps://string-db.org/network/212042.APH_0747Folylpolyglutamate synthase; Identified by similarity to SP:Q05865; match to protein family HMM TIGR01499; Belongs to the folylpolyglutamate synthase family.
gatA protein networkhttps://string-db.org/network/212042.APH_0748glutamyl-tRNA(Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl- [...]
ubiX protein networkhttps://string-db.org/network/212042.APH_07493-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylas [...]
APH_0750 protein networkhttps://string-db.org/network/212042.APH_0750Hypothetical protein; Identified by Glimmer2; putative.
APH_0751 protein networkhttps://string-db.org/network/212042.APH_0751Hypothetical protein; Identified by Glimmer2; putative.
APH_0752 protein networkhttps://string-db.org/network/212042.APH_0752Hypothetical protein; Identified by Glimmer2; putative.
APH_0753 protein networkhttps://string-db.org/network/212042.APH_0753Hypothetical protein; Identified by Glimmer2; putative.
APH_0754 protein networkhttps://string-db.org/network/212042.APH_0754Magnesium chelatase, subunit D/I family, ComM subfamily; Identified by match to protein family HMM PF01078; match to protein family HMM TIGR00368.
APH_0755 protein networkhttps://string-db.org/network/212042.APH_0755Hypothetical protein; Identified by Glimmer2; putative.
APH_0756 protein networkhttps://string-db.org/network/212042.APH_0756Hypothetical protein; Identified by Glimmer2; putative.
APH_0757 protein networkhttps://string-db.org/network/212042.APH_0757Hypothetical protein; Identified by Glimmer2; putative.
APH_0758 protein networkhttps://string-db.org/network/212042.APH_0758Hypothetical protein; Identified by Glimmer2; putative.
rpoH protein networkhttps://string-db.org/network/212042.APH_0759RNA polymerase sigma-32 factor; Identified by similarity to SP:P48194; match to protein family HMM PF04542; match to protein family HMM PF04545; Belongs to the sigma-70 factor family.
APH_0760 protein networkhttps://string-db.org/network/212042.APH_0760Hypothetical protein; Identified by Glimmer2; putative.
APH_0761 protein networkhttps://string-db.org/network/212042.APH_0761Phage uncharacterized protein; Identified by match to protein family HMM TIGR01630.
APH_0762 protein networkhttps://string-db.org/network/212042.APH_0762Hypothetical protein; Identified by Glimmer2; putative.
APH_0763 protein networkhttps://string-db.org/network/212042.APH_0763Hypothetical protein; Identified by Glimmer2; putative.
APH_0764 protein networkhttps://string-db.org/network/212042.APH_0764Hypothetical protein; Identified by Glimmer2; putative.
lepA protein networkhttps://string-db.org/network/212042.APH_0765GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codo [...]
APH_0766 protein networkhttps://string-db.org/network/212042.APH_0766Conserved hypothetical protein; Identified by similarity to GB:AAK22816.1.
pnp protein networkhttps://string-db.org/network/212042.APH_0767Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
rpsO protein networkhttps://string-db.org/network/212042.APH_0768Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several [...]
truB protein networkhttps://string-db.org/network/212042.APH_0769tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
mreB protein networkhttps://string-db.org/network/212042.APH_0770Rod shape-determining protein MreB; Identified by similarity to SP:Q01465; match to protein family HMM PF06723; match to protein family HMM TIGR00904.
APH_0771 protein networkhttps://string-db.org/network/212042.APH_0771Hypothetical protein; Identified by Glimmer2; putative.
APH_0773 protein networkhttps://string-db.org/network/212042.APH_0773Hypothetical protein; Identified by Glimmer2; putative.
APH_0774 protein networkhttps://string-db.org/network/212042.APH_0774Hypothetical protein; Identified by Glimmer2; putative.
APH_0775 protein networkhttps://string-db.org/network/212042.APH_0775Conserved hypothetical protein; Identified by similarity to PIR:E97838; match to protein family HMM PF07031.
APH_0778 protein networkhttps://string-db.org/network/212042.APH_0778Hypothetical protein; Identified by Glimmer2; putative.
APH_0779 protein networkhttps://string-db.org/network/212042.APH_0779Hypothetical protein; Identified by Glimmer2; putative.
coaE protein networkhttps://string-db.org/network/212042.APH_0780dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
APH_0781 protein networkhttps://string-db.org/network/212042.APH_0781Hypothetical protein; Identified by Glimmer2; putative.
APH_0782 protein networkhttps://string-db.org/network/212042.APH_0782Identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Belongs to the SUA5 family.
APH_0783 protein networkhttps://string-db.org/network/212042.APH_0783Conserved domain protein.
hup protein networkhttps://string-db.org/network/212042.APH_0784DNA-binding protein HU; Identified by similarity to SP:P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family.
APH_0785 protein networkhttps://string-db.org/network/212042.APH_0785Hypothetical protein; Identified by Glimmer2; putative.
APH_0786 protein networkhttps://string-db.org/network/212042.APH_0786Hypothetical protein; Identified by Glimmer2; putative.
APH_0788 protein networkhttps://string-db.org/network/212042.APH_0788Hypothetical protein; Identified by Glimmer2; putative.
APH_0789 protein networkhttps://string-db.org/network/212042.APH_0789Hypothetical protein; Identified by Glimmer2; putative.
pdxJ protein networkhttps://string-db.org/network/212042.APH_0790Pyridoxal phosphate biosynthesis protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phos [...]
APH_0791 protein networkhttps://string-db.org/network/212042.APH_0791Putative nicotinate (nicotinamide) nucleotide adenylyltransferase; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; Belongs to the NadD family.
APH_0792 protein networkhttps://string-db.org/network/212042.APH_0792Hypothetical protein; Identified by Glimmer2; putative.
APH_0794 protein networkhttps://string-db.org/network/212042.APH_0794Conserved hypothetical protein TIGR00046; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
APH_0795 protein networkhttps://string-db.org/network/212042.APH_0795Antioxidant, AhpC/Tsa family; Identified by match to protein family HMM PF00578.
ileS protein networkhttps://string-db.org/network/212042.APH_0796isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such e [...]
APH_0797 protein networkhttps://string-db.org/network/212042.APH_0797Hypothetical protein; Identified by Glimmer2; putative.
APH_0798 protein networkhttps://string-db.org/network/212042.APH_0798Hypothetical protein; Identified by Glimmer2; putative.
nuoI protein networkhttps://string-db.org/network/212042.APH_0801NADH dehydrogenase I, I subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme i [...]
lepB protein networkhttps://string-db.org/network/212042.APH_0802Signal peptidase I; Identified by similarity to SP:P26844; match to protein family HMM PF00717; match to protein family HMM TIGR02227; Belongs to the peptidase S26 family.
APH_0803 protein networkhttps://string-db.org/network/212042.APH_0803Iron-sulfur cluster assembly accessory protein; Identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; Belongs to the HesB/IscA family.
APH_0805 protein networkhttps://string-db.org/network/212042.APH_0805Hypothetical protein; Identified by Glimmer2; putative.
APH_0806 protein networkhttps://string-db.org/network/212042.APH_0806Hypothetical protein; Identified by Glimmer2; putative.
APH_0807 protein networkhttps://string-db.org/network/212042.APH_0807Hypothetical protein; Identified by Glimmer2; putative.
APH_0812 protein networkhttps://string-db.org/network/212042.APH_0812Hypothetical protein; Identified by Glimmer2; putative.
APH_0813 protein networkhttps://string-db.org/network/212042.APH_0813ATP synthase F1, gamma subunit, truncated; Identified by match to protein family HMM PF00231.
APH_0814 protein networkhttps://string-db.org/network/212042.APH_0814GTP cyclohydrolase I; Identified by similarity to SP:Q54769; match to protein family HMM PF01227; contains internal deletion; Belongs to the GTP cyclohydrolase I family.
APH_0815 protein networkhttps://string-db.org/network/212042.APH_0815Hypothetical protein; Identified by Glimmer2; putative.
APH_0816 protein networkhttps://string-db.org/network/212042.APH_0816Hypothetical protein; Identified by Glimmer2; putative.
APH_0818 protein networkhttps://string-db.org/network/212042.APH_0818Hypothetical protein; Identified by Glimmer2; putative.
APH_0819 protein networkhttps://string-db.org/network/212042.APH_0819Hypothetical protein; Identified by Glimmer2; putative.
APH_0820 protein networkhttps://string-db.org/network/212042.APH_0820Hypothetical protein; Identified by Glimmer2; putative.
APH_0821 protein networkhttps://string-db.org/network/212042.APH_0821Hypothetical protein; Identified by Glimmer2; putative.
APH_0822 protein networkhttps://string-db.org/network/212042.APH_0822Hypothetical protein; Identified by Glimmer2; putative.
APH_0823 protein networkhttps://string-db.org/network/212042.APH_0823Hypothetical protein; Identified by Glimmer2; putative.
APH_0824 protein networkhttps://string-db.org/network/212042.APH_0824Hypothetical protein; Identified by Glimmer2; putative.
APH_0825 protein networkhttps://string-db.org/network/212042.APH_0825Hypothetical protein; Identified by Glimmer2; putative.
APH_0826 protein networkhttps://string-db.org/network/212042.APH_0826Hypothetical protein; Identified by Glimmer2; putative.
APH_0828 protein networkhttps://string-db.org/network/212042.APH_0828Hypothetical protein; Identified by Glimmer2; putative.
APH_0829 protein networkhttps://string-db.org/network/212042.APH_0829Hypothetical protein; Identified by Glimmer2; putative.
APH_0830 protein networkhttps://string-db.org/network/212042.APH_0830Hypothetical protein; Identified by Glimmer2; putative.
APH_0831 protein networkhttps://string-db.org/network/212042.APH_0831Hypothetical protein; Identified by Glimmer2; putative.
APH_0832 protein networkhttps://string-db.org/network/212042.APH_0832Hypothetical protein; Identified by Glimmer2; putative.
APH_0833 protein networkhttps://string-db.org/network/212042.APH_0833Hypothetical protein; Identified by Glimmer2; putative.
APH_0834 protein networkhttps://string-db.org/network/212042.APH_0834Hypothetical protein; Identified by Glimmer2; putative.
APH_0836 protein networkhttps://string-db.org/network/212042.APH_0836Hypothetical protein; Identified by Glimmer2; putative.
APH_0837 protein networkhttps://string-db.org/network/212042.APH_0837Hypothetical protein; Identified by Glimmer2; putative.
APH_0838 protein networkhttps://string-db.org/network/212042.APH_0838Hypothetical protein; Identified by Glimmer2; putative.
APH_0839 protein networkhttps://string-db.org/network/212042.APH_0839Hypothetical protein; Identified by Glimmer2; putative.
APH_0840 protein networkhttps://string-db.org/network/212042.APH_0840Hypothetical protein; Identified by Glimmer2; putative.
APH_0841 protein networkhttps://string-db.org/network/212042.APH_0841Hypothetical protein; Identified by Glimmer2; putative.
APH_0842 protein networkhttps://string-db.org/network/212042.APH_0842Hypothetical protein; Identified by Glimmer2; putative.
APH_0843 protein networkhttps://string-db.org/network/212042.APH_0843Hypothetical protein; Identified by Glimmer2; putative.
APH_0848 protein networkhttps://string-db.org/network/212042.APH_0848Major facilitator family transporter; Identified by match to protein family HMM PF00083.
APH_0849 protein networkhttps://string-db.org/network/212042.APH_0849Conserved hypothetical protein; Identified by similarity to GB:AAS14586.1.
APH_0850 protein networkhttps://string-db.org/network/212042.APH_0850Hypothetical protein; Identified by Glimmer2; putative.
hemB protein networkhttps://string-db.org/network/212042.APH_0851Delta-aminolevulinic acid dehydratase; Identified by similarity to SP:P45622; match to protein family HMM PF00490; Belongs to the ALAD family.
APH_0852 protein networkhttps://string-db.org/network/212042.APH_0852Putative glutamine-dependent NAD(+) synthetase; Identified by similarity to SP:Q03638; match to protein family HMM PF00733; match to protein family HMM PF02540; match to protein family HMM TIGR00 [...]
APH_0856 protein networkhttps://string-db.org/network/212042.APH_0856Putative biotin--acetyl-CoA-carboxylase ligase, truncated; Identified by similarity to GB:AAS14632.1.
mutS protein networkhttps://string-db.org/network/212042.APH_0857DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase act [...]
APH_0858 protein networkhttps://string-db.org/network/212042.APH_0858Hypothetical protein; Identified by Glimmer2; putative.
ats-1 protein networkhttps://string-db.org/network/212042.APH_0859Anaplasma Translocated Substrate 1 (Ats-1); Name change according to the cited literature and GenBank accession number FJ210653. Edited start site from 912788 to 912419. PMID: 20174550.
APH_0860 protein networkhttps://string-db.org/network/212042.APH_0860HIT family protein; Identified by match to protein family HMM PF01230.
APH_0861 protein networkhttps://string-db.org/network/212042.APH_0861Phage major capsid protein, HK97 family; Identified by match to protein family HMM PF05065; match to protein family HMM TIGR01554.
sucA protein networkhttps://string-db.org/network/212042.APH_08632-oxoglutarate dehydrogenase, E1 component; Identified by similarity to SP:P07015; match to protein family HMM PF00676; match to protein family HMM PF02779; match to protein family HMM TIGR00239.
APH_0864 protein networkhttps://string-db.org/network/212042.APH_0864Hypothetical protein; Identified by Glimmer2; putative.
APH_0866 protein networkhttps://string-db.org/network/212042.APH_0866Hypothetical protein; Identified by Glimmer2; putative.
purB protein networkhttps://string-db.org/network/212042.APH_0867Adenylosuccinate lyase; Identified by similarity to SP:P12047; match to protein family HMM PF00206; match to protein family HMM TIGR00928; Belongs to the lyase 1 family. Adenylosuccinate lyase su [...]
APH_0868 protein networkhttps://string-db.org/network/212042.APH_0868Hypothetical protein; Identified by Glimmer2; putative.
APH_0869 protein networkhttps://string-db.org/network/212042.APH_0869Hypothetical protein; Identified by Glimmer2; putative.
APH_0870 protein networkhttps://string-db.org/network/212042.APH_0870Hypothetical protein; Identified by Glimmer2; putative.
APH_0871 protein networkhttps://string-db.org/network/212042.APH_0871Hypothetical protein; Identified by Glimmer2; putative.
APH_0872 protein networkhttps://string-db.org/network/212042.APH_0872Hypothetical protein; Identified by Glimmer2; putative.
APH_0873 protein networkhttps://string-db.org/network/212042.APH_0873Hypothetical protein; Identified by Glimmer2; putative.
APH_0874 protein networkhttps://string-db.org/network/212042.APH_0874Hypothetical protein; Identified by Glimmer2; putative.
APH_0876 protein networkhttps://string-db.org/network/212042.APH_0876biotin--acetyl-CoA-carboxylase ligase; Identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121.
miaB protein networkhttps://string-db.org/network/212042.APH_0880tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) [...]
APH_0882 protein networkhttps://string-db.org/network/212042.APH_0882Hypothetical protein; Identified by Glimmer2; putative.
APH_0883 protein networkhttps://string-db.org/network/212042.APH_0883Hypothetical protein; Identified by Glimmer2; putative.
uvrC protein networkhttps://string-db.org/network/212042.APH_0884Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsi [...]
APH_0887 protein networkhttps://string-db.org/network/212042.APH_0887Hypothetical protein; Identified by Glimmer2; putative.
APH_0888 protein networkhttps://string-db.org/network/212042.APH_0888Hypothetical protein; Identified by Glimmer2; putative.
APH_0891 protein networkhttps://string-db.org/network/212042.APH_0891Hypothetical protein; Identified by Glimmer2; putative.
APH_0892 protein networkhttps://string-db.org/network/212042.APH_0892Hypothetical protein; Identified by Glimmer2; putative.
htpG protein networkhttps://string-db.org/network/212042.APH_0893Chaperone protein HtpG; Molecular chaperone. Has ATPase activity.
APH_0894 protein networkhttps://string-db.org/network/212042.APH_0894Conserved hypothetical protein; Identified by similarity to GB:AAS14866.1.
APH_0895 protein networkhttps://string-db.org/network/212042.APH_0895Putative transporter, truncated.
APH_0896 protein networkhttps://string-db.org/network/212042.APH_0896Hypothetical protein; Identified by Glimmer2; putative.
nth protein networkhttps://string-db.org/network/212042.APH_0897Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- [...]
gyrA protein networkhttps://string-db.org/network/212042.APH_0899DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in [...]
p44-57 protein networkhttps://string-db.org/network/212042.APH_0900P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0901 protein networkhttps://string-db.org/network/212042.APH_0901Hypothetical protein; Identified by Glimmer2; putative.
p44-73 protein networkhttps://string-db.org/network/212042.APH_0902P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0903 protein networkhttps://string-db.org/network/212042.APH_0903Helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580.
APH_0904 protein networkhttps://string-db.org/network/212042.APH_0904Hypothetical protein; Identified by Glimmer2; putative.
APH_0905 protein networkhttps://string-db.org/network/212042.APH_0905Hypothetical protein; Identified by Glimmer2; putative.
APH_0906 protein networkhttps://string-db.org/network/212042.APH_0906Hypothetical protein; Identified by Glimmer2; putative.
APH_0907 protein networkhttps://string-db.org/network/212042.APH_0907Hypothetical protein; Identified by Glimmer2; putative.
APH_0908 protein networkhttps://string-db.org/network/212042.APH_0908Hypothetical protein; Identified by Glimmer2; putative.
APH_0909 protein networkhttps://string-db.org/network/212042.APH_0909Putative twitching motility protein; Identified by similarity to GB:AAB30824.1.
trmU protein networkhttps://string-db.org/network/212042.APH_0910tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
APH_0911 protein networkhttps://string-db.org/network/212042.APH_0911Coq7 family protein; Belongs to the COQ7 family.
APH_0912 protein networkhttps://string-db.org/network/212042.APH_0912Hypothetical protein; Identified by Glimmer2; putative.
APH_0913 protein networkhttps://string-db.org/network/212042.APH_0913Hypothetical protein; Identified by Glimmer2; putative.
APH_0915 protein networkhttps://string-db.org/network/212042.APH_0915Hypothetical protein; Identified by Glimmer2; putative.
APH_0919 protein networkhttps://string-db.org/network/212042.APH_0919Putative membrane protein.
APH_0920 protein networkhttps://string-db.org/network/212042.APH_0920Hypothetical protein; Identified by Glimmer2; putative.
APH_0922 protein networkhttps://string-db.org/network/212042.APH_0922Putative membrane protein.
APH_0923 protein networkhttps://string-db.org/network/212042.APH_0923Disulfide bond formation protein, DsbB family; Identified by match to protein family HMM PF02600.
APH_0924 protein networkhttps://string-db.org/network/212042.APH_0924Putative membrane protein.
rpmG protein networkhttps://string-db.org/network/212042.APH_0925Ribosomal protein L33; Identified by similarity to SP:P02436; match to protein family HMM PF00471; match to protein family HMM TIGR01023; Belongs to the bacterial ribosomal protein bL33 family.
APH_0926 protein networkhttps://string-db.org/network/212042.APH_0926Hypothetical protein; Identified by Glimmer2; putative.
APH_0927 protein networkhttps://string-db.org/network/212042.APH_0927Hypothetical protein; Identified by Glimmer2; putative.
APH_0928 protein networkhttps://string-db.org/network/212042.APH_0928Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
acpP protein networkhttps://string-db.org/network/212042.APH_0929Putative acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
fabF protein networkhttps://string-db.org/network/212042.APH_09303-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
APH_0931 protein networkhttps://string-db.org/network/212042.APH_0931Hypothetical protein; Identified by Glimmer2; putative.
APH_0933 protein networkhttps://string-db.org/network/212042.APH_0933Putative DNA processing protein DprA; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.
p44-34 protein networkhttps://string-db.org/network/212042.APH_0934Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-85 protein networkhttps://string-db.org/network/212042.APH_0935P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
p44-86 protein networkhttps://string-db.org/network/212042.APH_0936P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
APH_0937 protein networkhttps://string-db.org/network/212042.APH_0937Hypothetical protein; Identified by Glimmer2; putative.
p44-C-4 protein networkhttps://string-db.org/network/212042.APH_0938P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
mutL protein networkhttps://string-db.org/network/212042.APH_0939DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchm [...]
tolQ protein networkhttps://string-db.org/network/212042.APH_0940TolQ protein; Identified by similarity to SP:P05828; match to protein family HMM PF01618.
APH_0941 protein networkhttps://string-db.org/network/212042.APH_0941TonB family protein.
APH_0942 protein networkhttps://string-db.org/network/212042.APH_0942Hypothetical protein; Identified by Glimmer2; putative.
pleC protein networkhttps://string-db.org/network/212042.APH_0944Sensor histidine kinase PleC; Name change according to the cited literature. PMID: 16882029.
argD protein networkhttps://string-db.org/network/212042.APH_0945Acetylornithine/succinyldiaminopimelate aminotransferase; Identified by similarity to SP:P40732; match to protein family HMM PF00202; Belongs to the class-III pyridoxal-phosphate-dependent aminot [...]
APH_0947 protein networkhttps://string-db.org/network/212042.APH_0947Hypothetical protein; Identified by Glimmer2; putative.
APH_0948 protein networkhttps://string-db.org/network/212042.APH_0948Hypothetical protein; Identified by Glimmer2; putative.
APH_0950 protein networkhttps://string-db.org/network/212042.APH_0950Hypothetical protein; Identified by Glimmer2; putative.
p44-C-5 protein networkhttps://string-db.org/network/212042.APH_0951P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
APH_0952 protein networkhttps://string-db.org/network/212042.APH_0952Hypothetical protein; Identified by Glimmer2; putative.
p44-C-6 protein networkhttps://string-db.org/network/212042.APH_0953P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
APH_0954 protein networkhttps://string-db.org/network/212042.APH_0954Hypothetical protein; Identified by Glimmer2; putative.
APH_0955 protein networkhttps://string-db.org/network/212042.APH_0955Identified by match to protein family HMM PF01580; Belongs to the FtsK/SpoIIIE/SftA family.
APH_0956 protein networkhttps://string-db.org/network/212042.APH_0956Identified by match to protein family HMM PF02325.
APH_0957 protein networkhttps://string-db.org/network/212042.APH_0957CBS/transporter associated domain protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
APH_0958 protein networkhttps://string-db.org/network/212042.APH_0958Hypothetical protein; Identified by Glimmer2; putative.
APH_0959 protein networkhttps://string-db.org/network/212042.APH_0959Hypothetical protein; Identified by Glimmer2; putative.
thiE protein networkhttps://string-db.org/network/212042.APH_0960Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamin [...]
APH_0961 protein networkhttps://string-db.org/network/212042.APH_0961Conserved hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/deph [...]
APH_0962 protein networkhttps://string-db.org/network/212042.APH_0962Rhodanese domain protein; Identified by match to protein family HMM PF00581; Belongs to the UPF0176 family.
APH_0963 protein networkhttps://string-db.org/network/212042.APH_0963Hypothetical protein; Identified by Glimmer2; putative.
APH_0964 protein networkhttps://string-db.org/network/212042.APH_0964Collagen triple helix repeat protein; Identified by match to protein family HMM PF01391.
fmt protein networkhttps://string-db.org/network/212042.APH_0965methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethi [...]
APH_0967 protein networkhttps://string-db.org/network/212042.APH_0967Hypothetical protein; Identified by Glimmer2; putative.
lon protein networkhttps://string-db.org/network/212042.APH_0968ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for [...]
clpX protein networkhttps://string-db.org/network/212042.APH_0969ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in t [...]
clpP protein networkhttps://string-db.org/network/212042.APH_0970ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the d [...]
tig protein networkhttps://string-db.org/network/212042.APH_0971Putative trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; [...]
pgpA protein networkhttps://string-db.org/network/212042.APH_0974Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
APH_0975 protein networkhttps://string-db.org/network/212042.APH_0975Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583.
APH_0976 protein networkhttps://string-db.org/network/212042.APH_0976Conserved hypothetical protein; Identified by similarity to GB:AAS14420.1.
APH_0977 protein networkhttps://string-db.org/network/212042.APH_0977Conserved hypothetical protein.
APH_0978 protein networkhttps://string-db.org/network/212042.APH_0978Hypothetical protein; Identified by Glimmer2; putative.
APH_0979 protein networkhttps://string-db.org/network/212042.APH_09798-amino-7-oxononanoate synthase, truncated; Identified by similarity to SP:P53556; match to protein family HMM PF00155.
p44-C-7 protein networkhttps://string-db.org/network/212042.APH_0980Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-44 protein networkhttps://string-db.org/network/212042.APH_0981Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_0982 protein networkhttps://string-db.org/network/212042.APH_0982Putative cation ABC transporter, periplasmic cation-binding protein; Identified by similarity to SP:P39172; match to protein family HMM PF01297.
znuC protein networkhttps://string-db.org/network/212042.APH_0983Putative cation ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the A [...]
ubiB protein networkhttps://string-db.org/network/212042.APH_09842-polyprenylphenol 6-hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfa [...]
APH_0985 protein networkhttps://string-db.org/network/212042.APH_0985Putative lipoprotein.
APH_0986 protein networkhttps://string-db.org/network/212042.APH_0986ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
tatA protein networkhttps://string-db.org/network/212042.APH_0987Twin-arginine translocation protein, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in [...]
recR protein networkhttps://string-db.org/network/212042.APH_0988Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
rpsD protein networkhttps://string-db.org/network/212042.APH_0989Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
APH_0991 protein networkhttps://string-db.org/network/212042.APH_0991Hypothetical protein; Identified by Glimmer2; putative.
thiD protein networkhttps://string-db.org/network/212042.APH_0993Phosphomethylpyrimidine kinase; Identified by match to protein family HMM TIGR00097.
APH_0994 protein networkhttps://string-db.org/network/212042.APH_0994Conserved hypothetical protein; Identified by similarity to GB:AAS14796.1; Belongs to the DnaA family.
APH_0995 protein networkhttps://string-db.org/network/212042.APH_0995Putative membrane protein; Identified by match to protein family HMM PF01594.
APH_0996 protein networkhttps://string-db.org/network/212042.APH_0996Hypothetical protein; Identified by Glimmer2; putative.
APH_0997 protein networkhttps://string-db.org/network/212042.APH_0997Hypothetical protein; Identified by Glimmer2; putative.
sdhD protein networkhttps://string-db.org/network/212042.APH_0998Succinate dehydrogenase, hydrophobic membrane anchor protein; Identified by similarity to GB:AAC17941.1.
sdhC protein networkhttps://string-db.org/network/212042.APH_0999Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127.
APH_1001 protein networkhttps://string-db.org/network/212042.APH_1001Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Identified by similarity to GB:AAD45819.1.
APH_1002 protein networkhttps://string-db.org/network/212042.APH_1002Hypothetical protein; Identified by Glimmer2; putative.
dnaE protein networkhttps://string-db.org/network/212042.APH_1003DNA polymerase III, alpha subunit; Identified by match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594.
APH_1004 protein networkhttps://string-db.org/network/212042.APH_1004BolA protein; Identified by similarity to SP:P15298; match to protein family HMM PF01722; Belongs to the BolA/IbaG family.
APH_1006 protein networkhttps://string-db.org/network/212042.APH_1006Hypothetical protein; Identified by Glimmer2; putative.
APH_1007 protein networkhttps://string-db.org/network/212042.APH_1007Hypothetical protein; Identified by Glimmer2; putative.
pdxH protein networkhttps://string-db.org/network/212042.APH_1008Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
APH_1009 protein networkhttps://string-db.org/network/212042.APH_1009Hypothetical protein; Identified by Glimmer2; putative.
APH_1010 protein networkhttps://string-db.org/network/212042.APH_1010Identified by match to protein family HMM PF02230.
APH_1011 protein networkhttps://string-db.org/network/212042.APH_1011Hypothetical protein; Identified by Glimmer2; putative.
def-2 protein networkhttps://string-db.org/network/212042.APH_1012Putative polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-met [...]
pyrD protein networkhttps://string-db.org/network/212042.APH_1013Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
coaX protein networkhttps://string-db.org/network/212042.APH_1014Putative transcriptional activator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis; Belongs to the type III pantothenate kinase family.
APH_1015 protein networkhttps://string-db.org/network/212042.APH_1015Na+/H+ ion antiporter family protein; Identified by match to protein family HMM PF01899.
bioF protein networkhttps://string-db.org/network/212042.APH_10168-amino-7-oxononanoate synthase; Identified by similarity to SP:P53556; match to protein family HMM PF00155; match to protein family HMM PF00202.
APH_1017 protein networkhttps://string-db.org/network/212042.APH_1017Outer membrane protein, MSP2 family; Identified by match to protein family HMM PF01617.
rnhB protein networkhttps://string-db.org/network/212042.APH_1022Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
rpoC protein networkhttps://string-db.org/network/212042.APH_1023DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rpoB protein networkhttps://string-db.org/network/212042.APH_1024DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
rplL protein networkhttps://string-db.org/network/212042.APH_1025Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacter [...]
rplJ protein networkhttps://string-db.org/network/212042.APH_1026Ribosomal protein L10; Identified by match to protein family HMM PF00466.
rplA protein networkhttps://string-db.org/network/212042.APH_1027Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
rplK protein networkhttps://string-db.org/network/212042.APH_1028Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
nusG protein networkhttps://string-db.org/network/212042.APH_1029Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.
secE protein networkhttps://string-db.org/network/212042.APH_1030Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
tuf-2 protein networkhttps://string-db.org/network/212042.APH_1032Translation elongation factor Tu; Identified by similarity to SP:P48864; match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to pr [...]
fusA protein networkhttps://string-db.org/network/212042.APH_1033Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) [...]
rpsG protein networkhttps://string-db.org/network/212042.APH_1034Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interfac [...]
rpsL protein networkhttps://string-db.org/network/212042.APH_1035Ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.
APH_1036 protein networkhttps://string-db.org/network/212042.APH_1036Metallo-beta-lactamase family, beta-CASP subfamily; Identified by match to protein family HMM PF00753; match to protein family HMM PF07521.
APH_1037 protein networkhttps://string-db.org/network/212042.APH_1037TolB family protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
APH_1038 protein networkhttps://string-db.org/network/212042.APH_1038Hypothetical protein; Identified by Glimmer2; putative.
APH_1039 protein networkhttps://string-db.org/network/212042.APH_1039Hypothetical protein; Identified by Glimmer2; putative.
APH_1040 protein networkhttps://string-db.org/network/212042.APH_1040Putative cell division protein, degenerate; Likely degenerated ORF. Peptides match to this protein were not detected by global proteomic analysis.
APH_1042 protein networkhttps://string-db.org/network/212042.APH_1042Conserved hypothetical protein; Identified by similarity to GB:AAS14534.1; match to protein family HMM TIGR02396.
APH_1043 protein networkhttps://string-db.org/network/212042.APH_1043Type I secretion membrane fusion protein, HlyD family; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843.
APH_1045 protein networkhttps://string-db.org/network/212042.APH_1045ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
APH_1046 protein networkhttps://string-db.org/network/212042.APH_1046Hypothetical protein; Identified by Glimmer2; putative.
APH_1047 protein networkhttps://string-db.org/network/212042.APH_1047Hypothetical protein; Identified by Glimmer2; putative.
fabK protein networkhttps://string-db.org/network/212042.APH_1048Enoyl-(acyl-carrier-protein) reductase II; Identified by similarity to GB:AAF98273.1; match to protein family HMM PF03060.
msp5 protein networkhttps://string-db.org/network/212042.APH_1049Major surface protein 5; Identified by similarity to PIR:A49213; match to protein family HMM PF02630.
APH_1050 protein networkhttps://string-db.org/network/212042.APH_1050Putative phosphate ABC transporter, periplasmic phosphate-binding protein.
rpsU protein networkhttps://string-db.org/network/212042.APH_1051Ribosomal protein S21; Identified by match to protein family HMM TIGR00030; Belongs to the bacterial ribosomal protein bS21 family.
sucC protein networkhttps://string-db.org/network/212042.APH_1052succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus rep [...]
sucD protein networkhttps://string-db.org/network/212042.APH_1053succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus re [...]
APH_1054 protein networkhttps://string-db.org/network/212042.APH_1054Hypothetical protein; Identified by Glimmer2; putative.
APH_1055 protein networkhttps://string-db.org/network/212042.APH_1055Hypothetical protein; Identified by Glimmer2; putative.
APH_1056 protein networkhttps://string-db.org/network/212042.APH_1056Putative cell cycle protein MesJ.
APH_1057 protein networkhttps://string-db.org/network/212042.APH_1057Hypothetical protein; Identified by Glimmer2; putative.
APH_1058 protein networkhttps://string-db.org/network/212042.APH_1058Putative peptidase, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
alaS protein networkhttps://string-db.org/network/212042.APH_1059alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRN [...]
pstC protein networkhttps://string-db.org/network/212042.APH_1060Phosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the memb [...]
APH_1061 protein networkhttps://string-db.org/network/212042.APH_1061Glutamine synthetase domain protein; Identified by similarity to SP:P78061; match to protein family HMM PF00120; Belongs to the glutamine synthetase family.
APH_1062 protein networkhttps://string-db.org/network/212042.APH_1062Identified by match to protein family HMM PF00753.
p44-42 protein networkhttps://string-db.org/network/212042.APH_1064Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-74 protein networkhttps://string-db.org/network/212042.APH_1065Silent p44 gene encodes a truncated P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1066 protein networkhttps://string-db.org/network/212042.APH_1066Hypothetical protein; Identified by Glimmer2; putative.
APH_1067 protein networkhttps://string-db.org/network/212042.APH_1067Conserved hypothetical protein; Identified by similarity to GB:AAS14461.1.
APH_1068 protein networkhttps://string-db.org/network/212042.APH_1068Conserved hypothetical protein; Identified by similarity to GB:AAS14460.1.
APH_1069 protein networkhttps://string-db.org/network/212042.APH_1069Hypothetical protein; Identified by Glimmer2; putative.
lpdA-3 protein networkhttps://string-db.org/network/212042.APH_1070Dihydrolipoamide dehydrogenase; Identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01350.
rho-2 protein networkhttps://string-db.org/network/212042.APH_1071Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and re [...]
APH_1072 protein networkhttps://string-db.org/network/212042.APH_1072Hypothetical protein; Identified by Glimmer2; putative.
hslV protein networkhttps://string-db.org/network/212042.APH_1073ATP-dependent protease HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
hslU protein networkhttps://string-db.org/network/212042.APH_1074ATP-dependent Hsl protease, ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity.
ubiE protein networkhttps://string-db.org/network/212042.APH_1075Ubiquinone/menaquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-m [...]
p44-C-8 protein networkhttps://string-db.org/network/212042.APH_1076P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-41 protein networkhttps://string-db.org/network/212042.APH_1077P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-56 protein networkhttps://string-db.org/network/212042.APH_1078P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
metG protein networkhttps://string-db.org/network/212042.APH_1079methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the [...]
p44-50 protein networkhttps://string-db.org/network/212042.APH_1080P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-28 protein networkhttps://string-db.org/network/212042.APH_1081P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
p44-52 protein networkhttps://string-db.org/network/212042.APH_1082P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1083 protein networkhttps://string-db.org/network/212042.APH_1083Hypothetical protein; Identified by Glimmer2; putative.
APH_1084 protein networkhttps://string-db.org/network/212042.APH_1084Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear cen [...]
ctaD protein networkhttps://string-db.org/network/212042.APH_1085Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzym [...]
cyoE protein networkhttps://string-db.org/network/212042.APH_1086Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
bamD protein networkhttps://string-db.org/network/212042.APH_1087Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
purD protein networkhttps://string-db.org/network/212042.APH_1088Phosphoribosylamine--glycine ligase; Identified by similarity to SP:P12039; match to protein family HMM PF01071; match to protein family HMM PF02842; match to protein family HMM PF02843; match to [...]
APH_1089 protein networkhttps://string-db.org/network/212042.APH_1089Hypothetical protein; Identified by Glimmer2; putative.
yajC protein networkhttps://string-db.org/network/212042.APH_1090Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into mem [...]
APH_1091 protein networkhttps://string-db.org/network/212042.APH_1091Hypothetical protein; Identified by Glimmer2; putative.
APH_1092 protein networkhttps://string-db.org/network/212042.APH_1092Hypothetical protein; Identified by Glimmer2; putative.
APH_1093 protein networkhttps://string-db.org/network/212042.APH_1093Putative cell cycle protein MesJ.
APH_1094 protein networkhttps://string-db.org/network/212042.APH_1094Hypothetical protein; Identified by Glimmer2; putative.
APH_1095 protein networkhttps://string-db.org/network/212042.APH_1095Peptidase domain protein.
APH_1096 protein networkhttps://string-db.org/network/212042.APH_1096alanyl-tRNA synthetase domain protein.
dnaN protein networkhttps://string-db.org/network/212042.APH_1097DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loadi [...]
APH_1098 protein networkhttps://string-db.org/network/212042.APH_1098Identified by similarity to SP:O67779; match to protein family HMM PF01612.
ctrA protein networkhttps://string-db.org/network/212042.APH_1099DNA-binding response regulator CtrA; Name change according to the cited literature. PMID: 16882029.
APH_1100 protein networkhttps://string-db.org/network/212042.APH_1100Identified by match to protein family HMM PF01381.
ppa protein networkhttps://string-db.org/network/212042.APH_1101Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
APH_1102 protein networkhttps://string-db.org/network/212042.APH_1102Hypothetical protein; Identified by Glimmer2; putative.
APH_1103 protein networkhttps://string-db.org/network/212042.APH_1103Hypothetical protein; Identified by Glimmer2; putative.
APH_1104 protein networkhttps://string-db.org/network/212042.APH_1104Hypothetical protein; Identified by Glimmer2; putative.
APH_1106 protein networkhttps://string-db.org/network/212042.APH_1106Hypothetical protein; Identified by Glimmer2; putative.
rpsI protein networkhttps://string-db.org/network/212042.APH_1107Ribosomal protein S9; Identified by match to protein family HMM PF00380; Belongs to the universal ribosomal protein uS9 family.
rplM protein networkhttps://string-db.org/network/212042.APH_1108Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of [...]
APH_1109 protein networkhttps://string-db.org/network/212042.APH_1109Hypothetical protein; Identified by Glimmer2; putative.
APH_1110 protein networkhttps://string-db.org/network/212042.APH_1110Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
APH_1111 protein networkhttps://string-db.org/network/212042.APH_1111ATP-binding protein, Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
prsA protein networkhttps://string-db.org/network/212042.APH_1112Ribose-phosphate pyrophosphokinase; Identified by similarity to SP:P08330; match to protein family HMM PF00156; match to protein family HMM TIGR01251.
gatC protein networkhttps://string-db.org/network/212042.APH_1113glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) i [...]
p44-7 protein networkhttps://string-db.org/network/212042.APH_1114Encodes a full-length P44 outer membrane protein.
p44-C-9 protein networkhttps://string-db.org/network/212042.APH_1115P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
acnA protein networkhttps://string-db.org/network/212042.APH_1117Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
purK protein networkhttps://string-db.org/network/212042.APH_1119Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide [...]
apaG protein networkhttps://string-db.org/network/212042.APH_1120apaG protein; Identified by similarity to SP:P05636; match to protein family HMM PF04379.
p44-6 protein networkhttps://string-db.org/network/212042.APH_1121P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-3 protein networkhttps://string-db.org/network/212042.APH_1123P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
virB4-2 protein networkhttps://string-db.org/network/212042.APH_1129Type IV secretion system protein VirB4-2; Name change from VirB4-1 to VirB4-2. PMID: 20670295.
virB2-8 protein networkhttps://string-db.org/network/212042.APH_1130Type IV secretion protein VirB2 homolog VirB2-8; Assigned to VirB2 homolog based on COG3838. PMID: 19661282.
virB2-7 protein networkhttps://string-db.org/network/212042.APH_1131Type IV secretion protein VirB2 homolog VirB2-7; Assigned to VirB2 homolog based on fam_24 (or COG3838). PMID: 19661282.
virB2-6 protein networkhttps://string-db.org/network/212042.APH_1132Type IV secretion protein VirB2 homolog VirB2-6; Assigned to VirB2 homolog based on fam_24 (or COG3838). PMID: 19661282.
virB2-3 protein networkhttps://string-db.org/network/212042.APH_1136Type IV secretion protein VirB2 homolog VirB2-3; Assigned to VirB2 homolog based on COG3838. PMID: 19661282.
APH_1137 protein networkhttps://string-db.org/network/212042.APH_1137Hypothetical protein; Identified by Glimmer2; putative.
APH_1138 protein networkhttps://string-db.org/network/212042.APH_1138Hypothetical protein; Identified by Glimmer2; putative.
APH_1139 protein networkhttps://string-db.org/network/212042.APH_1139Hypothetical protein; Identified by Glimmer2; putative.
APH_1140 protein networkhttps://string-db.org/network/212042.APH_1140Hypothetical protein; Identified by Glimmer2; putative.
APH_1141 protein networkhttps://string-db.org/network/212042.APH_1141Hypothetical protein; Identified by Glimmer2; putative.
APH_1142 protein networkhttps://string-db.org/network/212042.APH_1142Hypothetical protein; Identified by Glimmer2; putative.
APH_1143 protein networkhttps://string-db.org/network/212042.APH_1143Hypothetical protein; Identified by Glimmer2; putative.
virB2-2 protein networkhttps://string-db.org/network/212042.APH_1144Type IV secretion protein VirB2 homolog VirB2-2; Assigned to VirB2 homolog based on COG3838. PMID: 19661282.
virB2-1 protein networkhttps://string-db.org/network/212042.APH_1145Type IV secretion protein VirB2 homolog VirB2-1; Assigned to VirB2 homolog based on COG3838. PMID: 19661282.
hflK protein networkhttps://string-db.org/network/212042.APH_1146HflK protein; HflC and HflK could encode or regulate a protease.
hflC protein networkhttps://string-db.org/network/212042.APH_1147HflC protein; HflC and HflK could regulate a protease.
APH_1148 protein networkhttps://string-db.org/network/212042.APH_1148Identified by match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; Belongs to the peptidase S1C family.
rnc protein networkhttps://string-db.org/network/212042.APH_1149Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some m [...]
ctaG protein networkhttps://string-db.org/network/212042.APH_1150Cytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; [...]
p44-47 protein networkhttps://string-db.org/network/212042.APH_1152P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1153 protein networkhttps://string-db.org/network/212042.APH_1153Hypothetical protein; Identified by Glimmer2; putative.
p44-4 protein networkhttps://string-db.org/network/212042.APH_1154P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-53 protein networkhttps://string-db.org/network/212042.APH_1155Full-length P44 outer membrane protein.
APH_1156 protein networkhttps://string-db.org/network/212042.APH_1156Hypothetical protein; Identified by Glimmer2; putative.
APH_1157 protein networkhttps://string-db.org/network/212042.APH_1157Hypothetical protein; Identified by Glimmer2; putative.
APH_1158 protein networkhttps://string-db.org/network/212042.APH_1158Peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193.
APH_1159 protein networkhttps://string-db.org/network/212042.APH_1159Peptidase, M16 family; Identified by match to protein family HMM PF00675; match to protein family HMM PF05193.
lspA protein networkhttps://string-db.org/network/212042.APH_1160Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
ribF protein networkhttps://string-db.org/network/212042.APH_1161Riboflavin biosynthesis protein RibF; Identified by similarity to SP:P54575; match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belon [...]
grxC protein networkhttps://string-db.org/network/212042.APH_1162Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
p44-53b protein networkhttps://string-db.org/network/212042.APH_1163P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
ftsA-1 protein networkhttps://string-db.org/network/212042.APH_1164Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring.
recJ protein networkhttps://string-db.org/network/212042.APH_1165single-stranded-DNA-specific exonuclease RecJ; Identified by similarity to SP:P21893; match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR006 [...]
APH_1166 protein networkhttps://string-db.org/network/212042.APH_1166Dehydrogenase, isocitrate/isopropylmalate family; Identified by match to protein family HMM PF00180.
APH_1167 protein networkhttps://string-db.org/network/212042.APH_1167Hypothetical protein; Identified by Glimmer2; putative.
p44-36 protein networkhttps://string-db.org/network/212042.APH_1168Encodes a full-length P44 outer membrane protein.
p44-19 protein networkhttps://string-db.org/network/212042.APH_1169P44-19 outer membrane protein, silent; Encodes a full-length P44 outer membrane protein.
APH_1170 protein networkhttps://string-db.org/network/212042.APH_1170Identified by match to protein family HMM PF00805.
APH_1171 protein networkhttps://string-db.org/network/212042.APH_1171Conserved hypothetical protein; Identified by similarity to GB:AAS14894.1.
pyrE protein networkhttps://string-db.org/network/212042.APH_1173Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
thiF protein networkhttps://string-db.org/network/212042.APH_1174Adenylyltransferase thiF; Identified by similarity to SP:P30138; match to protein family HMM PF00899; match to protein family HMM PF05237.
APH_1175 protein networkhttps://string-db.org/network/212042.APH_1175Glutaredoxin 3, truncated; Identified by similarity to SP:P37687.
p44-2 protein networkhttps://string-db.org/network/212042.APH_1176Encodes a full-length P44 outer membrane protein.
p44-54 protein networkhttps://string-db.org/network/212042.APH_1177P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
secA protein networkhttps://string-db.org/network/212042.APH_1178Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to [...]
ftsH protein networkhttps://string-db.org/network/212042.APH_1179ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane [...]
tilS protein networkhttps://string-db.org/network/212042.APH_1180tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is [...]
APH_1182 protein networkhttps://string-db.org/network/212042.APH_1182Potassium uptake protein, TrkH family; Identified by similarity to GB:BAA31229.1; match to protein family HMM PF02386; match to protein family HMM PF07723.
ftsA-2 protein networkhttps://string-db.org/network/212042.APH_1183Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
p44-8b protein networkhttps://string-db.org/network/212042.APH_1184P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-C-12 protein networkhttps://string-db.org/network/212042.APH_1185P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-40 protein networkhttps://string-db.org/network/212042.APH_1186P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1189 protein networkhttps://string-db.org/network/212042.APH_1189Putative ATP synthase F0, B subunit.
APH_1190 protein networkhttps://string-db.org/network/212042.APH_1190Putative ATP synthase F0, B' subunit.
atpE protein networkhttps://string-db.org/network/212042.APH_1191ATP synthase F0, C chain; Identified by match to protein family HMM PF00137.
atpB protein networkhttps://string-db.org/network/212042.APH_1192ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.
APH_1193 protein networkhttps://string-db.org/network/212042.APH_1193AraM domain protein; Identified by similarity to SP:P94527; match to protein family HMM PF01761.
p44-18 protein networkhttps://string-db.org/network/212042.APH_1194P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-1 protein networkhttps://string-db.org/network/212042.APH_1195Encodes a full-length P44 outer membrane protein.
APH_1196 protein networkhttps://string-db.org/network/212042.APH_1196Hypothetical protein; Identified by Glimmer2; putative.
APH_1197 protein networkhttps://string-db.org/network/212042.APH_1197Hexapeptide transferase family protein.
sucB protein networkhttps://string-db.org/network/212042.APH_11982-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; Identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family H [...]
map protein networkhttps://string-db.org/network/212042.APH_1199Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and [...]
APH_1200 protein networkhttps://string-db.org/network/212042.APH_1200Modification methylase, HemK family; Identified by similarity to SP:P37186; match to protein family HMM TIGR00536.
APH_1201 protein networkhttps://string-db.org/network/212042.APH_1201Hypothetical protein; Identified by Glimmer2; putative.
p44-77 protein networkhttps://string-db.org/network/212042.APH_1202P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-34b protein networkhttps://string-db.org/network/212042.APH_1203P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1204 protein networkhttps://string-db.org/network/212042.APH_1204Cytochrome c-type biogenesis protein, truncated; Identified by similarity to SP:P45403.
APH_1205 protein networkhttps://string-db.org/network/212042.APH_1205Putative cytochrome c oxidase, subunit I.
pgsA protein networkhttps://string-db.org/network/212042.APH_1206CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by similarity to SP:P06978; match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to t [...]
purH protein networkhttps://string-db.org/network/212042.APH_1207Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Identified by similarity to SP:P12048; match to protein family HMM PF01808; match to protein family HMM PF02142; matc [...]
fabZ protein networkhttps://string-db.org/network/212042.APH_1208Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated [...]
APH_1209 protein networkhttps://string-db.org/network/212042.APH_1209Conserved hypothetical protein; Identified by similarity to GB:AAS14739.1.
bamA protein networkhttps://string-db.org/network/212042.APH_1210Outer membrane protein, OMP85 family; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
APH_1211 protein networkhttps://string-db.org/network/212042.APH_1211Putative membrane-associated zinc metalloprotease; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054.
APH_1212 protein networkhttps://string-db.org/network/212042.APH_1212TPR repeat protein; Identified by match to protein family HMM PF03937.
APH_1213 protein networkhttps://string-db.org/network/212042.APH_1213Thiol:disulfide interchange protein, truncated; Identified by similarity to GB:AAM35423.1.
APH_1214 protein networkhttps://string-db.org/network/212042.APH_1214Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family.
p44-14 protein networkhttps://string-db.org/network/212042.APH_1215Encodes a full-length P44 outer membrane protein.
APH_1216 protein networkhttps://string-db.org/network/212042.APH_1216polyA polymerase/tRNA nucleotidyltransferase family protein; Identified by similarity to SP:P42977; match to protein family HMM PF01743; Belongs to the tRNA nucleotidyltransferase/poly(A) polymer [...]
ndk protein networkhttps://string-db.org/network/212042.APH_1217Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, [...]
APH_1218 protein networkhttps://string-db.org/network/212042.APH_1218DNA-binding protein; Identified by similarity to GB:AAN15209.1; match to protein family HMM PF01381.
omp-1X protein networkhttps://string-db.org/network/212042.APH_1219Omp-1X; Identified by similarity to GB:AAN15210.1; match to protein family HMM PF01617.
omp-1N protein networkhttps://string-db.org/network/212042.APH_1220Omp-1N; Identified by similarity to GB:AAN15211.1.
p44-18ES protein networkhttps://string-db.org/network/212042.APH_1221P44-18ES, P44 outer membrane protein expression locus with P44-18; Encodes a full-length P44 outer membrane protein.
APH_1222 protein networkhttps://string-db.org/network/212042.APH_1222Hypothetical protein; Identified by Glimmer2; putative.
APH_1223 protein networkhttps://string-db.org/network/212042.APH_1223recA protein, truncated; Identified by similarity to SP:Q04761.
valS protein networkhttps://string-db.org/network/212042.APH_1224valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors [...]
APH_1225 protein networkhttps://string-db.org/network/212042.APH_1225Hypothetical protein; Identified by Glimmer2; putative.
p44-15 protein networkhttps://string-db.org/network/212042.APH_1226P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
ftsY protein networkhttps://string-db.org/network/212042.APH_1227Signal recognition particle-docking protein FtsY; Identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064.
bioD protein networkhttps://string-db.org/network/212042.APH_1228Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ur [...]
p44-2b protein networkhttps://string-db.org/network/212042.APH_1229Encodes a full-length P44 outer membrane protein.
p44-C-13 protein networkhttps://string-db.org/network/212042.APH_1230P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
gshA protein networkhttps://string-db.org/network/212042.APH_1231Glutamate--cysteine ligase; Identified by similarity to GB:AAB41630.1; match to protein family HMM TIGR02049.
gltA protein networkhttps://string-db.org/network/212042.APH_1232Citrate synthase I; Identified by similarity to SP:P20901; match to protein family HMM PF00285; match to protein family HMM TIGR01798; Belongs to the citrate synthase family.
guaA protein networkhttps://string-db.org/network/212042.APH_1233GMP synthase; Catalyzes the synthesis of GMP from XMP.
APH_1234 protein networkhttps://string-db.org/network/212042.APH_1234Hypothetical protein; Identified by Glimmer2; putative.
APH_1235 protein networkhttps://string-db.org/network/212042.APH_1235Hypothetical protein; Identified by Glimmer2; putative.
p44-13 protein networkhttps://string-db.org/network/212042.APH_1238P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-15b protein networkhttps://string-db.org/network/212042.APH_1239Encodes a full-length P44 outer membrane protein.
msp4 protein networkhttps://string-db.org/network/212042.APH_1240Major surface protein 4; Identified by similarity to SP:Q07408; match to protein family HMM PF01617.
p44-33 protein networkhttps://string-db.org/network/212042.APH_1241P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-49 protein networkhttps://string-db.org/network/212042.APH_1242P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
hemA protein networkhttps://string-db.org/network/212042.APH_12435-aminolevulinic acid synthase; Identified by similarity to GB:BAA35068.1; match to protein family HMM PF00155; match to protein family HMM TIGR01821.
tyrS protein networkhttps://string-db.org/network/212042.APH_1244tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of [...]
glnA protein networkhttps://string-db.org/network/212042.APH_1246Glutamine synthetase, type I; Identified by similarity to SP:P05457; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; Belongs to th [...]
ispB protein networkhttps://string-db.org/network/212042.APH_1247Octaprenyl-diphosphate synthase; Identified by similarity to SP:P19641; match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family.
p44-27 protein networkhttps://string-db.org/network/212042.APH_1248P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-12 protein networkhttps://string-db.org/network/212042.APH_1249P44-12 outer membrane protein.
APH_1250 protein networkhttps://string-db.org/network/212042.APH_1250Major surface protein hypervariable region, truncated; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
APH_1251 protein networkhttps://string-db.org/network/212042.APH_1251Hypothetical protein; Identified by Glimmer2; putative.
holA protein networkhttps://string-db.org/network/212042.APH_1252DNA polymerase III, delta subunit; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144.
p44-39 protein networkhttps://string-db.org/network/212042.APH_1253P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1254 protein networkhttps://string-db.org/network/212042.APH_1254Hypothetical protein; Identified by Glimmer2; putative.
p44-10 protein networkhttps://string-db.org/network/212042.APH_1255P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion; similar to protein family HMM PF01617.
p44-23 protein networkhttps://string-db.org/network/212042.APH_1256Encodes a full-length P44 outer membrane protein.
APH_1257 protein networkhttps://string-db.org/network/212042.APH_1257Putative pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
fba protein networkhttps://string-db.org/network/212042.APH_1258Fructose-bisphosphate aldolase, class I; Identified by similarity to SP:P71295; match to protein family HMM PF01791.
APH_1260 protein networkhttps://string-db.org/network/212042.APH_1260Hypothetical protein; Identified by Glimmer2; putative.
p44-46 protein networkhttps://string-db.org/network/212042.APH_1261P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1262 protein networkhttps://string-db.org/network/212042.APH_1262Hypothetical protein; Identified by Glimmer2; putative.
infC protein networkhttps://string-db.org/network/212042.APH_1263Translation initiation factor IF-3; Identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; Belongs to the IF-3 family.
thrS protein networkhttps://string-db.org/network/212042.APH_1264threonyl-tRNA synthetase; Identified by similarity to SP:P00955; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein fa [...]
APH_1265 protein networkhttps://string-db.org/network/212042.APH_1265Competence/damage-inducible protein CinA C-terminal domain protein; Identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; Belongs to the CinA family.
rplS protein networkhttps://string-db.org/network/212042.APH_1266Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
trmD protein networkhttps://string-db.org/network/212042.APH_1267tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
rimM protein networkhttps://string-db.org/network/212042.APH_126816S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19 [...]
p44-16 protein networkhttps://string-db.org/network/212042.APH_1269Encodes a full-length P44 outer membrane protein.
APH_1270 protein networkhttps://string-db.org/network/212042.APH_1270Identified by match to protein family HMM PF01571; Belongs to the GcvT family.
APH_1271 protein networkhttps://string-db.org/network/212042.APH_1271Cytochrome c-type biogenesis protein, CcmF/CycK/CcsA family; Identified by similarity to SP:P45403; match to protein family HMM PF01578.
p44-48 protein networkhttps://string-db.org/network/212042.APH_1272P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-C-14 protein networkhttps://string-db.org/network/212042.APH_1273P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-25 protein networkhttps://string-db.org/network/212042.APH_1274P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locusn; similar to HMM PF01617.
p44-16b protein networkhttps://string-db.org/network/212042.APH_1275P44 gene encodes a full-length P44 outer membrane protein.
ispF protein networkhttps://string-db.org/network/212042.APH_12762C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid [...]
ispD protein networkhttps://string-db.org/network/212042.APH_12772-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Identified by match to protein family HMM PF01128.
purE protein networkhttps://string-db.org/network/212042.APH_1279Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
APH_1280 protein networkhttps://string-db.org/network/212042.APH_1280Hypothetical protein; Identified by Glimmer2; putative.
ihfA protein networkhttps://string-db.org/network/212042.APH_1281Integration host factor, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in tr [...]
APH_1282 protein networkhttps://string-db.org/network/212042.APH_1282Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.
p44-C-15 protein networkhttps://string-db.org/network/212042.APH_1284P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
ychF protein networkhttps://string-db.org/network/212042.APH_1285GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
APH_1286 protein networkhttps://string-db.org/network/212042.APH_1286Hypothetical protein; Identified by Glimmer2; putative.
p44-32 protein networkhttps://string-db.org/network/212042.APH_1287Encodes a full-length P44 outer membrane protein.
trmE protein networkhttps://string-db.org/network/212042.APH_1288tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain t [...]
ybeY protein networkhttps://string-db.org/network/212042.APH_1290Conserved hypothetical protein TIGR00043; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
APH_1291 protein networkhttps://string-db.org/network/212042.APH_1291Conserved hypothetical protein; Identified by similarity to GB:AAS14416.1; match to protein family HMM PF04543.
ftsZ protein networkhttps://string-db.org/network/212042.APH_1292Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the tim [...]
APH_1293 protein networkhttps://string-db.org/network/212042.APH_1293Hypothetical protein; Identified by Glimmer2; putative.
APH_1295 protein networkhttps://string-db.org/network/212042.APH_1295Conserved domain protein.
APH_1296 protein networkhttps://string-db.org/network/212042.APH_1296Hypothetical protein; Identified by Glimmer2; putative.
APH_1297 protein networkhttps://string-db.org/network/212042.APH_1297Flavoprotein; Identified by match to protein family HMM PF02441.
recG protein networkhttps://string-db.org/network/212042.APH_1298ATP-dependent DNA helicase RecG; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271.
APH_1299 protein networkhttps://string-db.org/network/212042.APH_1299Identified by similarity to SP:P34943; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to [...]
purF protein networkhttps://string-db.org/network/212042.APH_1300Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
pth protein networkhttps://string-db.org/network/212042.APH_1301peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
rplY protein networkhttps://string-db.org/network/212042.APH_1302Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacteria [...]
APH_1303 protein networkhttps://string-db.org/network/212042.APH_1303comF family protein.
APH_1304 protein networkhttps://string-db.org/network/212042.APH_1304Hypothetical protein; Identified by Glimmer2; putative.
APH_1305 protein networkhttps://string-db.org/network/212042.APH_1305Glutathione-regulated potassium-efflux system protein; Identified by similarity to SP:P45522; match to protein family HMM PF00999; match to protein family HMM PF02254; Belongs to the monovalent c [...]
APH_1306 protein networkhttps://string-db.org/network/212042.APH_1306Conserved hypothetical protein; Identified by similarity to GB:AAS14896.1.
APH_1307 protein networkhttps://string-db.org/network/212042.APH_1307Conserved hypothetical protein; Identified by similarity to GB:AAS14141.1; match to protein family HMM PF03653.
APH_1308 protein networkhttps://string-db.org/network/212042.APH_1308Putative pyruvate dehydrogenase complex, E1 component, beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
tldD protein networkhttps://string-db.org/network/212042.APH_1310TldD protein; Identified by similarity to SP:P46473; match to protein family HMM PF01523.
p44-24 protein networkhttps://string-db.org/network/212042.APH_1311Encodes a full-length P44 outer membrane protein.
p44-5 protein networkhttps://string-db.org/network/212042.APH_1312P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
p44-26 protein networkhttps://string-db.org/network/212042.APH_1313P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
ribA protein networkhttps://string-db.org/network/212042.APH_1314GTP cyclohydrolase II; Identified by similarity to SP:P43525; match to protein family HMM PF00925.
APH_1316 protein networkhttps://string-db.org/network/212042.APH_1316TPR domain protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719.
APH_1317 protein networkhttps://string-db.org/network/212042.APH_1317Hypothetical protein; Identified by Glimmer2; putative.
APH_1318 protein networkhttps://string-db.org/network/212042.APH_1318Hypothetical protein; Identified by Glimmer2; putative.
APH_1319 protein networkhttps://string-db.org/network/212042.APH_1319GTP cyclohydrolase II, degenerate; Peptides match to this protein was detected in human HL-60 cells by global proteomic analysis.
pgk protein networkhttps://string-db.org/network/212042.APH_1321Phosphoglycerate kinase; Identified by similarity to SP:P09404; match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
xseA protein networkhttps://string-db.org/network/212042.APH_1322Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonuc [...]
APH_1323 protein networkhttps://string-db.org/network/212042.APH_1323Zinc finger-like domain protein; Identified by match to protein family HMM TIGR02098.
p44-N-3 protein networkhttps://string-db.org/network/212042.APH_1324P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion.
APH_1325 protein networkhttps://string-db.org/network/212042.APH_1325Outer membrane protein, MSP2 family; Identified by match to protein family HMM PF01617.
secF protein networkhttps://string-db.org/network/212042.APH_1326Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
APH_1327 protein networkhttps://string-db.org/network/212042.APH_1327Hypothetical protein; Identified by Glimmer2; putative.
p44-17 protein networkhttps://string-db.org/network/212042.APH_1328P44-17 outermembrane protein, silent; P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-60 protein networkhttps://string-db.org/network/212042.APH_1329P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
smpB protein networkhttps://string-db.org/network/212042.APH_1331SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tm [...]
ribB protein networkhttps://string-db.org/network/212042.APH_13323,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
greA protein networkhttps://string-db.org/network/212042.APH_1333Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trappi [...]
atpA protein networkhttps://string-db.org/network/212042.APH_1334ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains fa [...]
atpH protein networkhttps://string-db.org/network/212042.APH_1335ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the e [...]
APH_1336 protein networkhttps://string-db.org/network/212042.APH_1336Hypothetical protein; Identified by Glimmer2; putative.
APH_1337 protein networkhttps://string-db.org/network/212042.APH_1337Conserved hypothetical protein; Identified by similarity to GB:CAE28374.1.
APH_1339 protein networkhttps://string-db.org/network/212042.APH_1339Conserved domain protein.
APH_1340 protein networkhttps://string-db.org/network/212042.APH_1340Hypothetical protein; Identified by Glimmer2; putative.
APH_1341 protein networkhttps://string-db.org/network/212042.APH_1341Lipoprotein releasing system, transmembrane protein, LolC/E family; Identified by match to protein family HMM PF02687; match to protein family HMM TIGR02212.
p44-31 protein networkhttps://string-db.org/network/212042.APH_1342P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-58 protein networkhttps://string-db.org/network/212042.APH_1343P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
APH_1344 protein networkhttps://string-db.org/network/212042.APH_1344Conserved hypothetical protein TIGR00150; Identified by similarity to GB:AAL02551.1; match to protein family HMM PF02367; match to protein family HMM TIGR00150.
APH_1345 protein networkhttps://string-db.org/network/212042.APH_1345Putative membrane protein; Identified by match to protein family HMM PF01027; Belongs to the BI1 family.
APH_1346 protein networkhttps://string-db.org/network/212042.APH_1346Putative aspartate-semialdehyde dehydrogenase; Identified by match to protein family HMM PF01118; match to protein family HMM PF02774; Belongs to the aspartate-semialdehyde dehydrogenase family.
APH_1347 protein networkhttps://string-db.org/network/212042.APH_1347Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC fami [...]
dnaX protein networkhttps://string-db.org/network/212042.APH_1348DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' [...]
gap protein networkhttps://string-db.org/network/212042.APH_1349Glyceraldehyde-3-phosphate dehydrogenase, type I; Identified by similarity to SP:O34425; match to protein family HMM PF00044; match to protein family HMM PF02800; Belongs to the glyceraldehyde-3- [...]
p44-51 protein networkhttps://string-db.org/network/212042.APH_1350P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-35 protein networkhttps://string-db.org/network/212042.APH_1351P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
p44-30 protein networkhttps://string-db.org/network/212042.APH_1352P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
APH_1353 protein networkhttps://string-db.org/network/212042.APH_1353Hypothetical protein; Identified by Glimmer2; putative.
recA protein networkhttps://string-db.org/network/212042.APH_1354recA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of hom [...]
p44-79 protein networkhttps://string-db.org/network/212042.APH_1355Encodes a full-length P44 outer membrane protein.
APH_1356 protein networkhttps://string-db.org/network/212042.APH_1356Hypothetical protein; Identified by Glimmer2; putative.
APH_1358 protein networkhttps://string-db.org/network/212042.APH_1358Major outer membrane protein; Identified by similarity to GB:AAK28689.1; match to protein family HMM PF01617.
APH_1359 protein networkhttps://string-db.org/network/212042.APH_1359Major outer membrane protein OMP-1A; Identified by match to protein family HMM PF01617.
ubiD protein networkhttps://string-db.org/network/212042.APH_13603-octaprenyl-4-hydroxybenzoate carboxy-lyase; Identified by similarity to SP:P26615; match to protein family HMM PF01977; match to protein family HMM TIGR00148; Belongs to the UbiD family.
APH_1361 protein networkhttps://string-db.org/network/212042.APH_1361Major surface protein 2; Identified by match to protein family HMM PF01617.
APH_1362 protein networkhttps://string-db.org/network/212042.APH_1362Hypothetical protein; Identified by Glimmer2; putative.
APH_1363 protein networkhttps://string-db.org/network/212042.APH_1363Hypothetical protein; Identified by Glimmer2; putative.
APH_1364 protein networkhttps://string-db.org/network/212042.APH_1364Hypothetical protein; Identified by Glimmer2; putative.
APH_1365 protein networkhttps://string-db.org/network/212042.APH_1365Hypothetical protein; Identified by Glimmer2; putative.
secD protein networkhttps://string-db.org/network/212042.APH_1366Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete pr [...]
uvrB protein networkhttps://string-db.org/network/212042.APH_1367Excinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for ab [...]
APH_1368 protein networkhttps://string-db.org/network/212042.APH_1368Hypothetical protein; Identified by Glimmer2; putative.
APH_1369 protein networkhttps://string-db.org/network/212042.APH_1369Hypothetical protein; Identified by Glimmer2; putative.
APH_1370 protein networkhttps://string-db.org/network/212042.APH_1370Hypothetical protein; Identified by Glimmer2; putative.
APH_1371 protein networkhttps://string-db.org/network/212042.APH_1371uracil-DNA glycosylase, family 4; Identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758.
def protein networkhttps://string-db.org/network/212042.APH_1372Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a [...]
APH_1373 protein networkhttps://string-db.org/network/212042.APH_1373Identified by match to protein family HMM PF01553.
rpsT protein networkhttps://string-db.org/network/212042.APH_1374Ribosomal protein S20; Binds directly to 16S ribosomal RNA.
APH_1375 protein networkhttps://string-db.org/network/212042.APH_1375Peptide deformylase, truncated; Identified by similarity to SP:P27251; match to protein family HMM PF01327.
lgt protein networkhttps://string-db.org/network/212042.APH_1376Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the [...]
mviN protein networkhttps://string-db.org/network/212042.APH_1377Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.
APH_1378 protein networkhttps://string-db.org/network/212042.APH_1378Conserved hypothetical protein; Identified by similarity to GB:AAS14447.1.
APH_1379 protein networkhttps://string-db.org/network/212042.APH_1379Hypothetical protein; Identified by Glimmer2; putative.
APH_1380 protein networkhttps://string-db.org/network/212042.APH_1380Hypothetical protein; Identified by Glimmer2; putative.
APH_1381 protein networkhttps://string-db.org/network/212042.APH_1381Hypothetical protein; Identified by Glimmer2; putative.
APH_1382 protein networkhttps://string-db.org/network/212042.APH_1382Hypothetical protein; Identified by Glimmer2; putative.
APH_1383 protein networkhttps://string-db.org/network/212042.APH_1383Hypothetical protein; Identified by Glimmer2; putative.
APH_1384 protein networkhttps://string-db.org/network/212042.APH_1384Hypothetical protein; Identified by Glimmer2; putative.
APH_1385 protein networkhttps://string-db.org/network/212042.APH_1385Hypothetical protein; Identified by Glimmer2; putative.
APH_1386 protein networkhttps://string-db.org/network/212042.APH_1386Hypothetical protein; Identified by Glimmer2; putative.
ampA protein networkhttps://string-db.org/network/212042.APH_1387HGE-2 protein; Secreted effector that hijacks host cell SUMOylation during A.phagocytophilum infection and is important for the pathogen's intracellular survival.
p44-C-16 protein networkhttps://string-db.org/network/212042.APH_1389P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-20 protein networkhttps://string-db.org/network/212042.APH_1390Similar to outer membrane protein, MSP2 family (APH_1017); p44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES ex [...]
p44-9 protein networkhttps://string-db.org/network/212042.APH_1391P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus; similar to HMM PF01617.
p44-11 protein networkhttps://string-db.org/network/212042.APH_1392Encodes a full-length P44 outer membrane protein.
APH_1393 protein networkhttps://string-db.org/network/212042.APH_1393Hypothetical protein; Identified by Glimmer2; putative.
APH_1394 protein networkhttps://string-db.org/network/212042.APH_1394Conserved hypothetical protein.
APH_1395 protein networkhttps://string-db.org/network/212042.APH_1395Cation efflux family protein; Identified by similarity to SP:P75757; match to protein family HMM PF01545; match to protein family HMM TIGR01297.
APH_1397 protein networkhttps://string-db.org/network/212042.APH_1397Putative heme exporter protein CcmB.
APH_1398 protein networkhttps://string-db.org/network/212042.APH_1398Putative dnaK suppressor protein; Identified by similarity to SP:P18274; match to protein family HMM PF01258.
p44-37 protein networkhttps://string-db.org/network/212042.APH_1400P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
p44-22 protein networkhttps://string-db.org/network/212042.APH_1401P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
virD4 protein networkhttps://string-db.org/network/212042.APH_1402Type IV secretion system protein VirD4; Identified by similarity to GB:AAM00422.1; match to protein family HMM PF02534.
virB11 protein networkhttps://string-db.org/network/212042.APH_1403Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
virB10 protein networkhttps://string-db.org/network/212042.APH_1404Type IV secretion system protein VirB10; Identified by similarity to GB:AAM00418.1; match to protein family HMM PF03743.
virB9-1 protein networkhttps://string-db.org/network/212042.APH_1405Type IV secretion system protein VirB9 (VirB9-1); Name change from VirB9-2 to VirB9-1. PMID: 20670295.
virB8-1 protein networkhttps://string-db.org/network/212042.APH_1406Type IV secretion protein VirB8-1; Name change from VirB8-2 to VirB8-1. PMID: 20670295.
APH_1407 protein networkhttps://string-db.org/network/212042.APH_1407Hypothetical protein; Identified by Glimmer2; putative.
p44-59 protein networkhttps://string-db.org/network/212042.APH_1408P44 gene encodes a full-length P44 outer membrane protein, which can be expressed through recombinatorial gene conversion to p44-18ES expression locus.
recF protein networkhttps://string-db.org/network/212042.APH_1409Putative DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to sing [...]
APH_1410 protein networkhttps://string-db.org/network/212042.APH_1410Hypothetical protein; Identified by Glimmer2; putative.
virB7 protein networkhttps://string-db.org/network/212042.APH_1413Type IV secretion system protein VirB7, putative; New ORF based on homolog to A. marginale VirB7 lipoprotein. However, lipobox of APH_1413 does not present. PMID: 20670295, 20065028.